ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl54f08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1FRIZ_DROME (P18537) Protein frizzled precursor (Frizzled-1) (dFz1) 28 6.2
2FRIZ_DROVI (Q24760) Protein frizzled precursor (Frizzled-1) (dFz1) 28 6.2
3ACDA1_METKA (Q8TXF7) Acetyl-CoA decarbonylase/synthase complex a... 28 8.2

>FRIZ_DROME (P18537) Protein frizzled precursor (Frizzled-1) (dFz1)|
          Length = 581

 Score = 28.1 bits (61), Expect = 6.2
 Identities = 11/14 (78%), Positives = 11/14 (78%)
 Frame = -2

Query: 53  AFIWWLCLAFQAWF 12
           AF WW CLAF AWF
Sbjct: 351 AFAWWSCLAF-AWF 363



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>FRIZ_DROVI (Q24760) Protein frizzled precursor (Frizzled-1) (dFz1)|
          Length = 583

 Score = 28.1 bits (61), Expect = 6.2
 Identities = 11/14 (78%), Positives = 11/14 (78%)
 Frame = -2

Query: 53  AFIWWLCLAFQAWF 12
           AF WW CLAF AWF
Sbjct: 353 AFAWWSCLAF-AWF 365



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>ACDA1_METKA (Q8TXF7) Acetyl-CoA decarbonylase/synthase complex alpha subunit 1|
           (EC 1.2.99.2) (ACDS complex alpha subunit 1) (ACDS
           complex carbon monoxide dehydrogenase 1) (ACDS CODH 1)
          Length = 760

 Score = 27.7 bits (60), Expect = 8.2
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = +2

Query: 143 VNRSSCISYAHSLGGCVLAA 202
           VN  SC+S AH LG C+  A
Sbjct: 555 VNTGSCVSNAHILGACIKIA 574


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,855,784
Number of Sequences: 219361
Number of extensions: 502696
Number of successful extensions: 1350
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1343
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1350
length of database: 80,573,946
effective HSP length: 59
effective length of database: 67,631,647
effective search space used: 1623159528
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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