>gb|CP000108.1| Chlorobium chlorochromatii CaD3, complete genome
          Length = 2572079

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 5     caaaccaaaaccaagcttgg 24
             ||||||||||||||||||||
Sbjct: 32275 caaaccaaaaccaagcttgg 32256

>gb|AC134859.4| Mus musculus BAC clone RP23-363G20 from chromosome 9, complete sequence
          Length = 182883

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 47     taaaagccaattaagtgtacatga 70
              ||||||||||| ||||||||||||
Sbjct: 127420 taaaagccaataaagtgtacatga 127397

>gb|AC137901.7| Mus musculus chromosome 6, clone RP23-81E17, complete sequence
          Length = 158419

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 102   cactccttttgccttagtct 121
             ||||||||||||||||||||
Sbjct: 56614 cactccttttgccttagtct 56633

>gb|AC144822.2| Danio rerio clone CH211-13O4, complete sequence
          Length = 164460

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 65    acatgacctggatgtttcag 84
             ||||||||||||||||||||
Sbjct: 79875 acatgacctggatgtttcag 79894

>gb|AC164563.4| Mus musculus BAC clone RP23-130D15 from chromosome 6, complete sequence
          Length = 202948

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 102   cactccttttgccttagtct 121
             ||||||||||||||||||||
Sbjct: 69814 cactccttttgccttagtct 69795

>emb|Z93015.9|HS169I5 Human DNA sequence from clone RP1-169I5 on chromosome Xp11 Contains the
             3' end of the DDX3 gene for DEAD/H (Asp-Glu-Ala-Asp/His)
             box polypeptide 3, the NYX gene for  nyctalopin, a gem
             (nuclear organelle) associated protein 7 (GEMIN7)
             pseudogene and two CpG islands, complete sequence
          Length = 133568

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 3     aacaaaccaaaaccaagcttggaa 26
             |||||||||||| |||||||||||
Sbjct: 33829 aacaaaccaaaaacaagcttggaa 33806

>emb|AL138712.19| Human DNA sequence from clone RP11-502P18 on chromosome 13 Contains 3'
              end of novel gene similar to Drosophila CG11486,  and the
              3' end of the FLT1 gene for fms-related tyrosine kinase 1
              (vascular endothelial growth factor/vascular permeability
              factor receptor), complete sequence
          Length = 164519

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 111    tgccttagtctaacatagct 130
              ||||||||||||||||||||
Sbjct: 111815 tgccttagtctaacatagct 111834

>gb|AC117530.2| Homo sapiens chromosome 5 clone RP11-294P1, complete sequence
          Length = 172442

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 40    caccatataaaagccaattaagtg 63
             ||||||||||||| ||||||||||
Sbjct: 55425 caccatataaaagtcaattaagtg 55402

>gb|AC010411.7| Homo sapiens chromosome 5 clone CTD-2165P17, complete sequence
          Length = 177807

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 40    caccatataaaagccaattaagtg 63
             ||||||||||||| ||||||||||
Sbjct: 48565 caccatataaaagtcaattaagtg 48588

>gb|AC008856.6|AC008856 Homo sapiens chromosome 5 clone CTD-2178N20, complete sequence
          Length = 154229

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 40    caccatataaaagccaattaagtg 63
             ||||||||||||| ||||||||||
Sbjct: 66119 caccatataaaagtcaattaagtg 66142

>gb|AC008166.2| Homo sapiens BAC clone RP11-155J2 from 2, complete sequence
          Length = 176991

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 2     gaacaaaccaaaaccaagct 21
             ||||||||||||||||||||
Sbjct: 46989 gaacaaaccaaaaccaagct 46970

>gb|AC175394.3| Gallus gallus BAC clone TAM31-49F22 from chromosome w, complete
             sequence
          Length = 123919

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 199   tgcatgatagggcaaccttt 218
             ||||||||||||||||||||
Sbjct: 21645 tgcatgatagggcaaccttt 21664

>emb|BX005454.5| Zebrafish DNA sequence from clone CH211-177N13 in linkage group 14,
             complete sequence
          Length = 63109

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 43    catataaaagccaattaagt 62
             ||||||||||||||||||||
Sbjct: 40187 catataaaagccaattaagt 40206

>gb|AF088189.1|AF088189 Mus musculus CD4 antigen (Cd4) gene, partial sequence
          Length = 23108

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 102  cactccttttgccttagtct 121
            ||||||||||||||||||||
Sbjct: 9229 cactccttttgccttagtct 9248

>gb|AC169087.3| Gallus gallus BAC clone CH261-119D18 from chromosome ul, complete
             sequence
          Length = 225652

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 227   ggatatggcattgctggtat 246
             ||||||||||||||||||||
Sbjct: 42820 ggatatggcattgctggtat 42839

>gb|AC126806.3| Mus musculus BAC clone RP23-158J3 from chromosome 9, complete
            sequence
          Length = 202590

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 47   taaaagccaattaagtgtacatga 70
            ||||||||||| ||||||||||||
Sbjct: 8240 taaaagccaataaagtgtacatga 8217

>gb|AC002397.1|AC002397 Mouse chromosome 6 BAC-284H12 (Research Genetics mouse BAC library)
            complete sequence
          Length = 227538

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 102  cactccttttgccttagtct 121
            ||||||||||||||||||||
Sbjct: 3318 cactccttttgccttagtct 3337

>gb|AC142254.4| Mus musculus BAC clone RP24-545G7 from 6, complete sequence
          Length = 159818

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 102   cactccttttgccttagtct 121
             ||||||||||||||||||||
Sbjct: 40493 cactccttttgccttagtct 40512

>emb|AL845513.9| Zebrafish DNA sequence from clone CH211-13O4 in linkage group 16,
             complete sequence
          Length = 164117

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 65    acatgacctggatgtttcag 84
             ||||||||||||||||||||
Sbjct: 84565 acatgacctggatgtttcag 84546


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,027,700
Number of Sequences: 3902068
Number of extensions: 2027700
Number of successful extensions: 45680
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 45625
Number of HSP's gapped (non-prelim): 55
length of query: 252
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 230
effective length of database: 17,147,199,772
effective search space: 3943855947560
effective search space used: 3943855947560
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)