>KRA11_HUMAN (Q07627) Keratin-associated protein 1-1 (Keratin-associated protein|
           1.1) (High sulfur keratin-associated protein 1.1)
           (Keratin-associated protein 1.6) (Keratin-associated
           protein 1.7)
          Length = 177

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 21/56 (37%), Positives = 23/56 (41%)
 Frame = -2

Query: 254 STLSRWLSSGWRDDGTCSGTCCEQREVNKSGIQLMRFEPLTRSCCCYALAVWCGQS 87
           ST  RW     R +GTC   CC       S  QL   E    SCC      +CGQS
Sbjct: 113 STRIRWCRPDCRVEGTCLPPCCVVSCTPPSCCQLHHAE---ASCC---RPSYCGQS 162

>LYST_MOUSE (P97412) Lysosomal trafficking regulator (Beige protein) (CHS1|
           homolog)
          Length = 3788

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 12/39 (30%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
 Frame = -3

Query: 334 YPKSCCLVGFCVH-CIRIAMVWLCACISLHCQGGYHLVG 221
           YP+ CC +  C H C+R+      +   +    G H VG
Sbjct: 543 YPERCCCIAVCAHQCLRLLQQVSLSTTCVQILSGVHSVG 581

>PTHR2_RAT (P70555) Parathyroid hormone receptor precursor (PTH2 receptor)|
          Length = 546

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
 Frame = -2

Query: 314 GWFLCALHPYCHGVALRVYQSTLSRW-LSSGWRDDGTCSG 198
           G+F+  ++ YC+G      + T +RW LS  W+    C G
Sbjct: 403 GFFVSIVYCYCNGEVQAEVKKTWTRWNLSIDWKKAPPCGG 442

>YHO0_YEAST (P38800) Hypothetical 149.7 kDa protein in IRE1-KSP1 intergenic|
           region
          Length = 1345

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 17/48 (35%), Positives = 23/48 (47%)
 Frame = +2

Query: 8   SNNKLITIHSCCKNHTHSHSFTAISR*TGHTTQREHSSSMSVSGAQTA 151
           SN +L T  +  K+   S S  A     GH     HSSS ++SG  T+
Sbjct: 252 SNQQLNTTEAGSKSKPSSLSRLAFGNLKGHIHSNSHSSSNAISGDDTS 299

>PROS_DROVI (Q9U6A1) Protein prospero|
          Length = 1556

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 4/30 (13%)
 Frame = -2

Query: 266  RVYQSTLSRWLSSGWRD----DGTCSGTCC 189
            R+   T+SR L+SGWR      G+C  +CC
Sbjct: 1101 RITPRTVSRILASGWRCAAQWTGSCRSSCC 1130

>Y2479_PHOLL (Q7N475) UPF0259 membrane protein plu2479|
          Length = 256

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 8/26 (30%), Positives = 21/26 (80%)
 Frame = +2

Query: 173 LPLSAHSMYQSMYHHLSNQMITTLTM 250
           +P++A+++Y+  ++   NQ+++TLT+
Sbjct: 1   MPITANTLYRDSFNFFKNQLLSTLTL 26

>LYST_HUMAN (Q99698) Lysosomal trafficking regulator (Beige homolog)|
          Length = 3801

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 11/39 (28%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
 Frame = -3

Query: 334 YPKSCCLVGFCVH-CIRIAMVWLCACISLHCQGGYHLVG 221
           YP+ CC +  C H C+R+      +   +    G H +G
Sbjct: 543 YPERCCCIAVCAHQCLRLLQQASLSSTCVQILSGVHNIG 581

>Y500_MYCPN (P75287) Very hypothetical adhesin P1-like protein MPN500|
           (P02_orf527V)
          Length = 527

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -2

Query: 257 QSTLSRWLSSGWRDDGTCSGT 195
           Q+ L  W  +GWR+D T SG+
Sbjct: 66  QANLQLWTGAGWRNDKTTSGS 86

>KRA13_HUMAN (Q8IUG1) Keratin-associated protein 1-3 (Keratin-associated protein|
           1.8) (Keratin-associated protein 1.9)
          Length = 177

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 20/56 (35%), Positives = 23/56 (41%)
 Frame = -2

Query: 254 STLSRWLSSGWRDDGTCSGTCCEQREVNKSGIQLMRFEPLTRSCCCYALAVWCGQS 87
           ST  RW     R +GTC   CC       +  QL   E    SCC      +CGQS
Sbjct: 113 STRIRWCRPDCRVEGTCLPPCCVVSCTPPTCCQLHHAE---ASCC---RPSYCGQS 162

>Y4405_CHRVO (Q7NPT7) UPF0161 protein CV_4405|
          Length = 69

 Score = 27.7 bits (60), Expect = 7.3
 Identities = 18/52 (34%), Positives = 23/52 (44%)
 Frame = -2

Query: 269 LRVYQSTLSRWLSSGWRDDGTCSGTCCEQREVNKSGIQLMRFEPLTRSCCCY 114
           +R YQ  +S WL+   R   TCSG   E   V+K G          R C C+
Sbjct: 9   IRFYQLAISPWLAPRCRFQPTCSGYAIE--AVSKHGALKGGCLAARRICRCH 58

>HGD_BURS3 (Q39J54) Homogentisate 1,2-dioxygenase (EC 1.13.11.5)|
           (Homogentisicase) (Homogentisate oxygenase)
           (Homogentisic acid oxidase)
          Length = 444

 Score = 27.7 bits (60), Expect = 7.3
 Identities = 15/44 (34%), Positives = 23/44 (52%)
 Frame = +3

Query: 99  PHSESIAAA*ACQGLKPHKLDATLIYLSLLTACTRACTIISPTR 230
           P +++   A A    KPHK+DAT+ ++          T+I PTR
Sbjct: 379 PDADTFEKASASDTTKPHKVDATMAFM------FETRTLIRPTR 416

>NHAA_ECOLI (P13738) Na(+)/H(+) antiporter 1 (Sodium/proton antiporter 1)|
          Length = 388

 Score = 27.7 bits (60), Expect = 7.3
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = -1

Query: 309 VFVCTASVLPWCGSARVSVYIVKVVIIW 226
           V +   +VL  CG+ R  VYI+  V++W
Sbjct: 189 VAIAVLAVLNLCGARRTGVYILVGVVLW 216

>YHHK_ECOLI (P37613) Hypothetical protein yhhK|
          Length = 127

 Score = 27.7 bits (60), Expect = 7.3
 Identities = 11/14 (78%), Positives = 12/14 (85%)
 Frame = +1

Query: 199 PEHVPSSLQPDDNH 240
           PE+ PSSLQ DDNH
Sbjct: 24  PEYSPSSLQVDDNH 37

>PTHR2_HUMAN (P49190) Parathyroid hormone receptor precursor (PTH2 receptor)|
          Length = 550

 Score = 27.7 bits (60), Expect = 7.3
 Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
 Frame = -2

Query: 314 GWFLCALHPYCHGVALRVYQSTLSRW-LSSGWRDDGTCSGTCC 189
           G+F+  ++ YC+G      +   SRW LS  W+    C    C
Sbjct: 406 GFFVSIIYCYCNGEVQAEVKKMWSRWNLSVDWKRTPPCGSRRC 448

>WTF23_SCHPO (O94409) Hypothetical protein wtf23|
          Length = 368

 Score = 27.3 bits (59), Expect = 9.6
 Identities = 10/33 (30%), Positives = 20/33 (60%)
 Frame = -3

Query: 307 FCVHCIRIAMVWLCACISLHCQGGYHLVGEMMV 209
           F   CI++ +V+L  C+ +   G +++  EMM+
Sbjct: 171 FLAQCIKVTVVFLAQCVKVISIGLFNIRREMMI 203

>B3A4_RAT (Q8K4V2) Anion exchange protein 4 (Anion exchanger 4) (Solute|
           carrier family 4 member 9)
          Length = 953

 Score = 27.3 bits (59), Expect = 9.6
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = -2

Query: 308 FLCALHPYCHGVALRVYQSTLSRWLSSG 225
           FL ALHP C    L +Y +T++  ++ G
Sbjct: 374 FLDALHPQCFSAVLYIYLATVTNAITFG 401

>JHD3A_MOUSE (Q8BW72) JmjC domain-containing histone demethylation protein 3A|
           (EC 1.14.11.-) (Jumonji domain-containing protein 2A)
          Length = 1064

 Score = 27.3 bits (59), Expect = 9.6
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = -3

Query: 172 IRVASSLCGLSP*HAHAAAMLSLCGVASLSTDCC 71
           +RV +S  G+ P  A    M S C   +L  DCC
Sbjct: 743 VRVHASCYGVPPAKASEEWMCSRCSANALEEDCC 776


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,843,635
Number of Sequences: 219361
Number of extensions: 1042689
Number of successful extensions: 2917
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 2826
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2916
length of database: 80,573,946
effective HSP length: 90
effective length of database: 60,831,456
effective search space used: 1459954944
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)