ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl54f05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1GP115_HUMAN (Q8IZF3) Probable G-protein coupled receptor 115 (G-... 29 2.8
2ADPPT_XENLA (Q6DJH2) L-aminoadipate-semialdehyde dehydrogenase-p... 28 4.7
3PMPG_CHLTR (O84879) Probable outer membrane protein pmpG precurs... 28 8.1

>GP115_HUMAN (Q8IZF3) Probable G-protein coupled receptor 115 (G-protein coupled|
           receptor PGR18)
          Length = 752

 Score = 29.3 bits (64), Expect = 2.8
 Identities = 15/36 (41%), Positives = 20/36 (55%)
 Frame = +1

Query: 70  QIPTGREQNFRIQ*KCSGRSAVSSAWISSPCCLFYH 177
           Q P G+ +  RIQ KC G   +SS+  S PC   +H
Sbjct: 94  QSPEGKPKTGRIQEKCEG-PCISSSNCSQPCAKDFH 128



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>ADPPT_XENLA (Q6DJH2) L-aminoadipate-semialdehyde|
           dehydrogenase-phosphopantetheinyl transferase (EC
           2.7.8.-) (4'-phosphopantetheinyl transferase)
           (Alpha-aminoadipic semialdehyde
           dehydrogenase-phosphopantetheinyl transferase)
           (AASD-PPT)
          Length = 302

 Score = 28.5 bits (62), Expect = 4.7
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +2

Query: 170 FITIGSRSTYPCVNSSLLHRNKY 238
           F+T GS S YPC N ++ H+  Y
Sbjct: 90  FLTGGSSSEYPCFNFNVSHQGDY 112



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>PMPG_CHLTR (O84879) Probable outer membrane protein pmpG precursor|
           (Polymorphic membrane protein G)
          Length = 1013

 Score = 27.7 bits (60), Expect = 8.1
 Identities = 13/33 (39%), Positives = 15/33 (45%)
 Frame = +1

Query: 85  REQNFRIQ*KCSGRSAVSSAWISSPCCLFYHDR 183
           R  +  IQ    GRS     W+S     FYHDR
Sbjct: 721 RSAHSAIQASVDGRSYCRGLWVSGVSNFFYHDR 753


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,546,584
Number of Sequences: 219361
Number of extensions: 689876
Number of successful extensions: 1732
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1712
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1732
length of database: 80,573,946
effective HSP length: 63
effective length of database: 66,754,203
effective search space used: 1602100872
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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