Clone Name | rbastl54f04 |
---|---|
Clone Library Name | barley_pub |
>emb|BX957239.7| Zebrafish DNA sequence from clone DKEY-173N20 in linkage group 19, complete sequence Length = 182432 Score = 44.1 bits (22), Expect = 0.24 Identities = 22/22 (100%) Strand = Plus / Minus Query: 118 aatattgtaaatttcaggaaac 139 |||||||||||||||||||||| Sbjct: 44131 aatattgtaaatttcaggaaac 44110
>ref|XM_714043.1| Candida albicans SC5314 hypothetical protein (CaO19_5574), mRNA Length = 1197 Score = 42.1 bits (21), Expect = 0.96 Identities = 21/21 (100%) Strand = Plus / Plus Query: 19 ttggaattttaaacaagcaga 39 ||||||||||||||||||||| Sbjct: 915 ttggaattttaaacaagcaga 935
>gb|AC134581.5| Mus musculus BAC clone RP24-90L20 from chromosome 8, complete sequence Length = 201483 Score = 42.1 bits (21), Expect = 0.96 Identities = 21/21 (100%) Strand = Plus / Plus Query: 13 ttatttttggaattttaaaca 33 ||||||||||||||||||||| Sbjct: 125871 ttatttttggaattttaaaca 125891
>ref|XM_641992.1| Dictyostelium discoideum hypothetical protein (DDB0189329), partial mRNA Length = 1419 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 57 aaagatgagcaagagatttt 76 |||||||||||||||||||| Sbjct: 199 aaagatgagcaagagatttt 218
>gb|AC122409.4| Mus musculus BAC clone RP24-140P18 from chromosome 8, complete sequence Length = 178068 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 aacataaccaaaatcctatg 156 |||||||||||||||||||| Sbjct: 168149 aacataaccaaaatcctatg 168130
>gb|AC135505.15| Medicago truncatula clone mth2-24j8, complete sequence Length = 124563 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 aagatgagcaagagattttg 77 |||||||||||||||||||| Sbjct: 90149 aagatgagcaagagattttg 90130
>emb|AL691514.5| Human DNA sequence from clone RP11-105M16 on chromosome 10, complete sequence Length = 154348 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 aaatttcaggaaacataacc 145 |||||||||||||||||||| Sbjct: 138423 aaatttcaggaaacataacc 138442
>emb|AL590680.11| Human DNA sequence from clone RP11-246G15 on chromosome 6, complete sequence Length = 21388 Score = 40.1 bits (20), Expect = 3.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 119 atattgtaaatttcaggaaacata 142 |||| ||||||||||||||||||| Sbjct: 12062 atatagtaaatttcaggaaacata 12039
>gb|AC087620.6| Homo sapiens chromosome 8, clone RP11-35G22, complete sequence Length = 154034 Score = 40.1 bits (20), Expect = 3.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 28 taaacaagcagatagttgtgagct 51 |||||||||||| ||||||||||| Sbjct: 115267 taaacaagcagacagttgtgagct 115244
>gb|AY224188.1| Medicago truncatula adenosylhomocysteinase (AHC1) gene, complete cds Length = 99431 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 8 gtttgttatttttggaattt 27 |||||||||||||||||||| Sbjct: 80460 gtttgttatttttggaattt 80441
>gb|AC130533.2| Mus musculus BAC clone RP23-211B19 from 8, complete sequence Length = 203431 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 aacataaccaaaatcctatg 156 |||||||||||||||||||| Sbjct: 10203 aacataaccaaaatcctatg 10184
>emb|AL844193.6| Zebrafish DNA sequence from clone DKEY-28J3, complete sequence Length = 210900 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 tttaaacaagcagatagttg 45 |||||||||||||||||||| Sbjct: 161194 tttaaacaagcagatagttg 161213 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,209,844 Number of Sequences: 3902068 Number of extensions: 3209844 Number of successful extensions: 74935 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 12 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 74919 Number of HSP's gapped (non-prelim): 16 length of query: 291 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 269 effective length of database: 17,147,199,772 effective search space: 4612596738668 effective search space used: 4612596738668 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)