ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbastl54f01 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AL604063.4| Mouse DNA sequence from clone RP23-467J12 on chromosome 11, complete sequence Length = 146759 Score = 48.1 bits (24), Expect = 0.005 Identities = 24/24 (100%) Strand = Plus / Plus Query: 46 taactttgattctttaaaaataaa 69 |||||||||||||||||||||||| Sbjct: 42422 taactttgattctttaaaaataaa 42445
>gb|AC126270.4| Mus musculus BAC clone RP23-233A12 from chromosome 10, complete sequence Length = 208709 Score = 46.1 bits (23), Expect = 0.020 Identities = 23/23 (100%) Strand = Plus / Plus Query: 50 tttgattctttaaaaataaataa 72 ||||||||||||||||||||||| Sbjct: 45907 tttgattctttaaaaataaataa 45929
>gb|AC132437.3| Mus musculus BAC clone RP23-230M17 from chromosome 5, complete sequence Length = 176825 Score = 46.1 bits (23), Expect = 0.020 Identities = 23/23 (100%) Strand = Plus / Plus Query: 50 tttgattctttaaaaataaataa 72 ||||||||||||||||||||||| Sbjct: 124153 tttgattctttaaaaataaataa 124175
>gb|AC153364.4| Mus musculus BAC clone RP23-35J21 from chromosome 10, complete sequence Length = 231668 Score = 46.1 bits (23), Expect = 0.020 Identities = 23/23 (100%) Strand = Plus / Plus Query: 50 tttgattctttaaaaataaataa 72 ||||||||||||||||||||||| Sbjct: 190750 tttgattctttaaaaataaataa 190772
>gb|AC157588.8| Mus musculus BAC clone RP24-95J4 from chromosome 5, complete sequence Length = 220137 Score = 46.1 bits (23), Expect = 0.020 Identities = 23/23 (100%) Strand = Plus / Plus Query: 50 tttgattctttaaaaataaataa 72 ||||||||||||||||||||||| Sbjct: 29710 tttgattctttaaaaataaataa 29732
>gb|AC096745.2| Homo sapiens BAC clone RP11-358D17 from 4, complete sequence Length = 158952 Score = 44.1 bits (22), Expect = 0.077 Identities = 22/22 (100%) Strand = Plus / Minus Query: 51 ttgattctttaaaaataaataa 72 |||||||||||||||||||||| Sbjct: 127502 ttgattctttaaaaataaataa 127481
>gb|AC018742.5| Homo sapiens BAC clone RP11-644J14 from 2, complete sequence Length = 174225 Score = 44.1 bits (22), Expect = 0.077 Identities = 22/22 (100%) Strand = Plus / Plus Query: 46 taactttgattctttaaaaata 67 |||||||||||||||||||||| Sbjct: 57096 taactttgattctttaaaaata 57117
>emb|AL109759.4|CNS018OW Human chromosome 14 DNA sequence BAC R-898B23 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 201794 Score = 44.1 bits (22), Expect = 0.077 Identities = 25/26 (96%) Strand = Plus / Minus Query: 45 ttaactttgattctttaaaaataaat 70 |||||||||||| ||||||||||||| Sbjct: 168330 ttaactttgattttttaaaaataaat 168305
>gb|DQ068952.1| Phanogenia gracilis mitochondrion, complete genome Length = 15892 Score = 44.1 bits (22), Expect = 0.077 Identities = 22/22 (100%) Strand = Plus / Minus Query: 51 ttgattctttaaaaataaataa 72 |||||||||||||||||||||| Sbjct: 1147 ttgattctttaaaaataaataa 1126
>emb|AL353681.8| Human DNA sequence from clone RP1-158P9 on chromosome 1 Contains a novel gene and a pseudogene, complete sequence Length = 113539 Score = 42.1 bits (21), Expect = 0.30 Identities = 24/25 (96%) Strand = Plus / Minus Query: 43 cattaactttgattctttaaaaata 67 |||||| |||||||||||||||||| Sbjct: 23137 cattaattttgattctttaaaaata 23113
>emb|AL646051.19| Mouse DNA sequence from clone RP23-222M22 on chromosome 11 Contains the 5' end of the Hs3st3a gene for heparan sulfate (glucosamine) 3-O-sulfotransferase 3A and a CpG island, complete sequence Length = 144847 Score = 42.1 bits (21), Expect = 0.30 Identities = 21/21 (100%) Strand = Plus / Plus Query: 54 attctttaaaaataaataagc 74 ||||||||||||||||||||| Sbjct: 15560 attctttaaaaataaataagc 15580
>gb|AC155841.6| Mus musculus 6 BAC RP24-490O5 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 141583 Score = 42.1 bits (21), Expect = 0.30 Identities = 21/21 (100%) Strand = Plus / Plus Query: 52 tgattctttaaaaataaataa 72 ||||||||||||||||||||| Sbjct: 141418 tgattctttaaaaataaataa 141438
>gb|AC153842.9| Mus musculus 6 BAC RP23-348K12 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 174100 Score = 42.1 bits (21), Expect = 0.30 Identities = 21/21 (100%) Strand = Plus / Plus Query: 52 tgattctttaaaaataaataa 72 ||||||||||||||||||||| Sbjct: 96869 tgattctttaaaaataaataa 96889
>gb|AC015842.9|AC015842 Homo sapiens chromosome 17, clone RP11-350B3, complete sequence Length = 115933 Score = 42.1 bits (21), Expect = 0.30 Identities = 21/21 (100%) Strand = Plus / Plus Query: 54 attctttaaaaataaataagc 74 ||||||||||||||||||||| Sbjct: 46208 attctttaaaaataaataagc 46228
>emb|X91015.1|CCUA1MRN C.carpio Cyca-UA1*01 mRNA MHC class I protein Length = 2050 Score = 42.1 bits (21), Expect = 0.30 Identities = 21/21 (100%) Strand = Plus / Plus Query: 52 tgattctttaaaaataaataa 72 ||||||||||||||||||||| Sbjct: 2000 tgattctttaaaaataaataa 2020
>emb|X91028.1|CCUA1EX48 C.carpio Cyca-UA1*02 gene (exon 4-8) Length = 3356 Score = 42.1 bits (21), Expect = 0.30 Identities = 21/21 (100%) Strand = Plus / Plus Query: 52 tgattctttaaaaataaataa 72 ||||||||||||||||||||| Sbjct: 3220 tgattctttaaaaataaataa 3240
>dbj|AB018581.1| Cyprinus carpio mRNA for MHC class I antigen, complete cds Length = 2179 Score = 42.1 bits (21), Expect = 0.30 Identities = 21/21 (100%) Strand = Plus / Plus Query: 52 tgattctttaaaaataaataa 72 ||||||||||||||||||||| Sbjct: 2152 tgattctttaaaaataaataa 2172
>gb|AC108806.10| Mus musculus chromosome 14, clone RP23-246G7, complete sequence Length = 189619 Score = 40.1 bits (20), Expect = 1.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 actttgattctttaaaaata 67 |||||||||||||||||||| Sbjct: 73626 actttgattctttaaaaata 73607
>emb|CR749229.1| Homo sapiens mRNA; cDNA DKFZp686K0831 (from clone DKFZp686K0831) Length = 5095 Score = 40.1 bits (20), Expect = 1.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 tttaaaaataaataagccct 77 |||||||||||||||||||| Sbjct: 3102 tttaaaaataaataagccct 3083
>emb|AL031115.2|HS598A24 Human DNA sequence from clone RP4-598A24 on chromosome Xp11.1-11.23 Contains the ZXDB gene for zinc finger, X-linked, duplicated B and a CpG island, complete sequence Length = 96558 Score = 40.1 bits (20), Expect = 1.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 50 tttgattctttaaaaataaataag 73 |||| ||||||||||||||||||| Sbjct: 82604 tttgtttctttaaaaataaataag 82581
>gb|AC163499.2| Mus musculus chromosome 5, clone RP23-250F1, complete sequence Length = 155609 Score = 40.1 bits (20), Expect = 1.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 34 taaacaggtcattaactttg 53 |||||||||||||||||||| Sbjct: 143166 taaacaggtcattaactttg 143147
>emb|X52106.1|NIMIDRPM Neurospora intermedia mitochondrial plasmid DNA for DNA polymerase and RNA polymerase Length = 8642 Score = 40.1 bits (20), Expect = 1.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 attctttaaaaataaataag 73 |||||||||||||||||||| Sbjct: 6676 attctttaaaaataaataag 6657
>emb|Z99130.1|HS83L6 Human DNA sequence from clone RP1-83L6 on chromosome Xp11.1-11.22, complete sequence Length = 61187 Score = 40.1 bits (20), Expect = 1.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 50 tttgattctttaaaaataaataag 73 |||| ||||||||||||||||||| Sbjct: 9363 tttgtttctttaaaaataaataag 9386
>gb|AC138908.3| Homo sapiens chromosome 5 clone RP11-615D2, complete sequence Length = 201419 Score = 40.1 bits (20), Expect = 1.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 tttaaaaataaataagccct 77 |||||||||||||||||||| Sbjct: 30117 tttaaaaataaataagccct 30136
>emb|AL731849.5| Mouse DNA sequence from clone RP23-208A2 on chromosome 11 Contains part of the Car10 gene for carbonic anhydrase 10, complete sequence Length = 114636 Score = 40.1 bits (20), Expect = 1.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 tctttaaaaataaataagcc 75 |||||||||||||||||||| Sbjct: 82094 tctttaaaaataaataagcc 82075
>emb|CR749289.1| Homo sapiens mRNA; cDNA DKFZp686L02246 (from clone DKFZp686L02246) Length = 5647 Score = 40.1 bits (20), Expect = 1.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 tttaaaaataaataagccct 77 |||||||||||||||||||| Sbjct: 3669 tttaaaaataaataagccct 3650
>gb|AC097714.3| Homo sapiens BAC clone RP11-324H7 from 4, complete sequence Length = 181756 Score = 40.1 bits (20), Expect = 1.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 ctttgattctttaaaaataa 68 |||||||||||||||||||| Sbjct: 137001 ctttgattctttaaaaataa 136982
>gb|AC110002.2| Homo sapiens chromosome 5 clone RP11-125A13, complete sequence Length = 168708 Score = 40.1 bits (20), Expect = 1.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 actttgattctttaaaaata 67 |||||||||||||||||||| Sbjct: 83924 actttgattctttaaaaata 83943
>gb|AC010455.5| Homo sapiens chromosome 5 clone CTD-2255G13, complete sequence Length = 112672 Score = 40.1 bits (20), Expect = 1.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 tttaaaaataaataagccct 77 |||||||||||||||||||| Sbjct: 24488 tttaaaaataaataagccct 24507
>gb|AC026775.6| Homo sapiens chromosome 5 clone CTC-244L19, complete sequence Length = 196826 Score = 40.1 bits (20), Expect = 1.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 tttaaaaataaataagccct 77 |||||||||||||||||||| Sbjct: 52711 tttaaaaataaataagccct 52692
>gb|AC008851.7| Homo sapiens chromosome 5 clone CTD-2173D20, complete sequence Length = 130416 Score = 40.1 bits (20), Expect = 1.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 tttaaaaataaataagccct 77 |||||||||||||||||||| Sbjct: 10804 tttaaaaataaataagccct 10823
>gb|AC008547.6| Homo sapiens chromosome 5 clone CTC-502M5, complete sequence Length = 114005 Score = 40.1 bits (20), Expect = 1.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 actttgattctttaaaaata 67 |||||||||||||||||||| Sbjct: 39278 actttgattctttaaaaata 39259
>gb|AC026701.6| Homo sapiens chromosome 5 clone CTC-547D20, complete sequence Length = 87338 Score = 40.1 bits (20), Expect = 1.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 49 ctttgattctttaaaaataaataa 72 |||||||||||| ||||||||||| Sbjct: 4736 ctttgattcttttaaaataaataa 4713
>gb|AC008525.7|AC008525 Homo sapiens chromosome 5 clone CTC-467M3, complete sequence Length = 123238 Score = 40.1 bits (20), Expect = 1.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 49 ctttgattctttaaaaataaataa 72 |||||||||||| ||||||||||| Sbjct: 50657 ctttgattcttttaaaataaataa 50680
>gb|AC018469.5|AC018469 Homo sapiens BAC clone RP11-540I12 from 4, complete sequence Length = 168696 Score = 40.1 bits (20), Expect = 1.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 taaacaggtcattaactttg 53 |||||||||||||||||||| Sbjct: 130934 taaacaggtcattaactttg 130953
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 1.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 59 ttaaaaataaataagcccta 78 |||||||||||||||||||| Sbjct: 30193696 ttaaaaataaataagcccta 30193677 Score = 38.2 bits (19), Expect = 4.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 56 tctttaaaaataaataagc 74 ||||||||||||||||||| Sbjct: 12379637 tctttaaaaataaataagc 12379655
>gb|AF517943.1| Helobdella robusta hedgehog-like protein (hh) mRNA, complete cds Length = 3480 Score = 40.1 bits (20), Expect = 1.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 tgaaaagaaaatcgtttgct 29 |||||||||||||||||||| Sbjct: 1993 tgaaaagaaaatcgtttgct 1974
>gb|AC008507.11| Homo sapiens chromosome 19 clone CTC-448F2, complete sequence Length = 179005 Score = 40.1 bits (20), Expect = 1.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 actttgattctttaaaaata 67 |||||||||||||||||||| Sbjct: 55437 actttgattctttaaaaata 55456
>gb|AC151831.3| Mus musculus BAC clone RP24-81D24 from chromosome 14, complete sequence Length = 212749 Score = 40.1 bits (20), Expect = 1.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 40 ggtcattaactttgattctt 59 |||||||||||||||||||| Sbjct: 137969 ggtcattaactttgattctt 137988
>gb|AC138832.2| Homo sapiens chromosome 5 clone RP11-1174L13, complete sequence Length = 225384 Score = 40.1 bits (20), Expect = 1.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 tttaaaaataaataagccct 77 |||||||||||||||||||| Sbjct: 176866 tttaaaaataaataagccct 176847
>gb|AC138948.2| Homo sapiens chromosome 5 clone RP11-800G17, complete sequence Length = 172404 Score = 40.1 bits (20), Expect = 1.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 tttaaaaataaataagccct 77 |||||||||||||||||||| Sbjct: 22897 tttaaaaataaataagccct 22916
>gb|AC138817.2| Homo sapiens chromosome 5 clone RP11-1099E10, complete sequence Length = 185785 Score = 40.1 bits (20), Expect = 1.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 tttaaaaataaataagccct 77 |||||||||||||||||||| Sbjct: 5445 tttaaaaataaataagccct 5464
>emb|BX641011.1|HSM807182 Homo sapiens mRNA; cDNA DKFZp686C01233 (from clone DKFZp686C01233) Length = 3984 Score = 40.1 bits (20), Expect = 1.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 tttaaaaataaataagccct 77 |||||||||||||||||||| Sbjct: 2071 tttaaaaataaataagccct 2052
>dbj|AB051476.3| Homo sapiens mRNA for KIAA1689 protein, partial cds Length = 10819 Score = 40.1 bits (20), Expect = 1.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 tttaaaaataaataagccct 77 |||||||||||||||||||| Sbjct: 8925 tttaaaaataaataagccct 8906
>gb|AC157756.1| Mus musculus 10 BAC RP24-377M12 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 180821 Score = 40.1 bits (20), Expect = 1.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 taaaaataaataagccctag 79 |||||||||||||||||||| Sbjct: 81037 taaaaataaataagccctag 81018
>emb|CT025686.7| Mouse DNA sequence from clone RP24-273I13 on chromosome 14, complete sequence Length = 186233 Score = 40.1 bits (20), Expect = 1.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 actttgattctttaaaaata 67 |||||||||||||||||||| Sbjct: 93441 actttgattctttaaaaata 93460
>gb|AC101857.12| Mus musculus chromosome 5, clone RP23-304E8, complete sequence Length = 167722 Score = 40.1 bits (20), Expect = 1.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 34 taaacaggtcattaactttg 53 |||||||||||||||||||| Sbjct: 44397 taaacaggtcattaactttg 44378
>emb|AL607004.4|OSJN00129 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNba0093F12, complete sequence Length = 186142 Score = 40.1 bits (20), Expect = 1.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 59 ttaaaaataaataagcccta 78 |||||||||||||||||||| Sbjct: 89987 ttaaaaataaataagcccta 89968
>gb|AC140946.1| Gallus gallus BAC clone TAM33-20F15 from chromosome ul, complete sequence Length = 156730 Score = 40.1 bits (20), Expect = 1.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 tttaaaaataaataagccct 77 |||||||||||||||||||| Sbjct: 151574 tttaaaaataaataagccct 151593
>emb|AL663091.13| Mouse DNA sequence from clone RP23-392P11 on chromosome 2, complete sequence Length = 196078 Score = 40.1 bits (20), Expect = 1.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 tttaaaaataaataagccct 77 |||||||||||||||||||| Sbjct: 87284 tttaaaaataaataagccct 87265
>emb|AL671925.4| Mouse DNA sequence from clone RP23-236O21 on chromosome 4, complete sequence Length = 218429 Score = 40.1 bits (20), Expect = 1.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 ttaactttgattctttaaaa 64 |||||||||||||||||||| Sbjct: 37961 ttaactttgattctttaaaa 37980
>gb|AC118642.11| Mus musculus chromosome 18, clone RP24-112L21, complete sequence Length = 193995 Score = 38.2 bits (19), Expect = 4.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 53 gattctttaaaaataaata 71 ||||||||||||||||||| Sbjct: 63833 gattctttaaaaataaata 63851
>gb|AC151754.1| Ornithorhynchus anatinus chromosome UNK clone OABb-469A1, complete sequence Length = 138437 Score = 38.2 bits (19), Expect = 4.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 54 attctttaaaaataaataa 72 ||||||||||||||||||| Sbjct: 112642 attctttaaaaataaataa 112660
>ref|XM_639815.1| Dictyostelium discoideum putative polyketide synthase (DDB0230082), partial mRNA Length = 7656 Score = 38.2 bits (19), Expect = 4.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 51 ttgattctttaaaaataaa 69 ||||||||||||||||||| Sbjct: 1705 ttgattctttaaaaataaa 1687
>gb|AC158304.11| Mus musculus chromosome 7, clone RP24-192F23, complete sequence Length = 166451 Score = 38.2 bits (19), Expect = 4.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 56 tctttaaaaataaataagc 74 ||||||||||||||||||| Sbjct: 128742 tctttaaaaataaataagc 128724
>gb|AC116409.9| Mus musculus chromosome 3, clone RP24-337P23, complete sequence Length = 162232 Score = 38.2 bits (19), Expect = 4.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 59 ttaaaaataaataagccct 77 ||||||||||||||||||| Sbjct: 101497 ttaaaaataaataagccct 101515
>gb|AE014832.1| Plasmodium falciparum 3D7 chromosome 10 section 4 of 7 of the complete sequence Length = 258658 Score = 38.2 bits (19), Expect = 4.8 Identities = 22/23 (95%) Strand = Plus / Plus Query: 48 actttgattctttaaaaataaat 70 ||||| ||||||||||||||||| Sbjct: 80979 acttttattctttaaaaataaat 81001
>gb|AC118592.7| Mus musculus chromosome 7, clone RP24-463B5, complete sequence Length = 134114 Score = 38.2 bits (19), Expect = 4.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 46 taactttgattctttaaaa 64 ||||||||||||||||||| Sbjct: 41836 taactttgattctttaaaa 41818
>gb|AC124339.9| Mus musculus chromosome 7, clone RP24-238P16, complete sequence Length = 163620 Score = 38.2 bits (19), Expect = 4.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 47 aactttgattctttaaaaa 65 ||||||||||||||||||| Sbjct: 123953 aactttgattctttaaaaa 123971
>gb|AC161226.7| Mus musculus chromosome 3, clone RP23-298B8, complete sequence Length = 200107 Score = 38.2 bits (19), Expect = 4.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 52 tgattctttaaaaataaat 70 ||||||||||||||||||| Sbjct: 169253 tgattctttaaaaataaat 169271
>gb|BC067913.1| Xenopus tropicalis hypothetical protein MGC69315, mRNA (cDNA clone MGC:69315 IMAGE:5308772), complete cds Length = 1670 Score = 38.2 bits (19), Expect = 4.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 54 attctttaaaaataaataa 72 ||||||||||||||||||| Sbjct: 1603 attctttaaaaataaataa 1621
>gb|AC182702.2| Populus trichocarpa clone Pop1-75J20, complete sequence Length = 102031 Score = 38.2 bits (19), Expect = 4.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 54 attctttaaaaataaataa 72 ||||||||||||||||||| Sbjct: 22856 attctttaaaaataaataa 22838
>gb|AC130714.3| Mus musculus BAC clone RP23-367L18 from chromosome 18, complete sequence Length = 193184 Score = 38.2 bits (19), Expect = 4.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 54 attctttaaaaataaataa 72 ||||||||||||||||||| Sbjct: 2270 attctttaaaaataaataa 2252
>gb|AF003383.1| Caenorhabditis elegans cosmid ZC250, complete sequence Length = 34372 Score = 38.2 bits (19), Expect = 4.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 50 tttgattctttaaaaataa 68 ||||||||||||||||||| Sbjct: 16063 tttgattctttaaaaataa 16081
>gb|AC117072.3| Dictyostelium discoideum chromosome 2 map 3879572-4071762 strain AX4, complete sequence Length = 192187 Score = 38.2 bits (19), Expect = 4.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 54 attctttaaaaataaataa 72 ||||||||||||||||||| Sbjct: 133927 attctttaaaaataaataa 133909
>gb|AF049895.3| Homo sapiens chromosome 8 multiple clones map q21.3, complete sequence Length = 331864 Score = 38.2 bits (19), Expect = 4.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 55 ttctttaaaaataaataag 73 ||||||||||||||||||| Sbjct: 141867 ttctttaaaaataaataag 141849
>ref|XM_977407.1| PREDICTED: Mus musculus RIKEN cDNA 5730406M06 gene, transcript variant 1 (5730406M06Rik), mRNA Length = 1222 Score = 38.2 bits (19), Expect = 4.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 54 attctttaaaaataaataa 72 ||||||||||||||||||| Sbjct: 1136 attctttaaaaataaataa 1118
>ref|XM_895678.2| PREDICTED: Mus musculus RIKEN cDNA 5730406M06 gene, transcript variant 7 (5730406M06Rik), mRNA Length = 1222 Score = 38.2 bits (19), Expect = 4.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 54 attctttaaaaataaataa 72 ||||||||||||||||||| Sbjct: 1136 attctttaaaaataaataa 1118
>gb|AC139750.3| Mus musculus BAC clone RP24-444K8 from chromosome 17, complete sequence Length = 160413 Score = 38.2 bits (19), Expect = 4.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 55 ttctttaaaaataaataag 73 ||||||||||||||||||| Sbjct: 97735 ttctttaaaaataaataag 97717
>emb|CR388083.19| Zebrafish DNA sequence from clone DKEY-181J1 in linkage group 8, complete sequence Length = 101219 Score = 38.2 bits (19), Expect = 4.8 Identities = 25/27 (92%) Strand = Plus / Minus Query: 42 tcattaactttgattctttaaaaataa 68 ||||||||||| |||| |||||||||| Sbjct: 9784 tcattaactttcattcattaaaaataa 9758
>gb|AC003009.1|HUAC003009 Homo sapiens Chromosome 16 BAC clone CIT987-SK502C10, complete sequence Length = 152503 Score = 38.2 bits (19), Expect = 4.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 54 attctttaaaaataaataa 72 ||||||||||||||||||| Sbjct: 1632 attctttaaaaataaataa 1614
>gb|AY160107.1| Dictyostelium discoideum nucleotide exchange factor RasGEF S (gefS) gene, complete cds Length = 6273 Score = 38.2 bits (19), Expect = 4.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 54 attctttaaaaataaataa 72 ||||||||||||||||||| Sbjct: 2671 attctttaaaaataaataa 2653
>gb|AC123935.4| Mus musculus BAC clone RP23-354J3 from chromosome 13, complete sequence Length = 219370 Score = 38.2 bits (19), Expect = 4.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 56 tctttaaaaataaataagc 74 ||||||||||||||||||| Sbjct: 159697 tctttaaaaataaataagc 159715
>gb|AC087728.3| Papio anubis clone RP41-340H23, complete sequence Length = 198888 Score = 38.2 bits (19), Expect = 4.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 51 ttgattctttaaaaataaa 69 ||||||||||||||||||| Sbjct: 69306 ttgattctttaaaaataaa 69288
>gb|AC122307.4| Mus musculus BAC clone RP23-287C21 from 12, complete sequence Length = 194202 Score = 38.2 bits (19), Expect = 4.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 4 agttcttgaaaagaaaatc 22 ||||||||||||||||||| Sbjct: 79289 agttcttgaaaagaaaatc 79307
>gb|AC098723.3| Mus musculus BAC clone RP23-3D10 from 7, complete sequence Length = 227968 Score = 38.2 bits (19), Expect = 4.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 46 taactttgattctttaaaa 64 ||||||||||||||||||| Sbjct: 51223 taactttgattctttaaaa 51241
>gb|AC006348.3| Homo sapiens PAC clone RP5-876K2 from 7, complete sequence Length = 135883 Score = 38.2 bits (19), Expect = 4.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 55 ttctttaaaaataaataag 73 ||||||||||||||||||| Sbjct: 97879 ttctttaaaaataaataag 97861
>gb|AC153143.4| Mus musculus BAC clone RP23-241N10 from chromosome 13, complete sequence Length = 207860 Score = 38.2 bits (19), Expect = 4.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 42 tcattaactttgattcttt 60 ||||||||||||||||||| Sbjct: 101516 tcattaactttgattcttt 101498
>gb|AC100092.9| Mus musculus chromosome 3, clone RP23-37H10, complete sequence Length = 186799 Score = 38.2 bits (19), Expect = 4.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 52 tgattctttaaaaataaat 70 ||||||||||||||||||| Sbjct: 12094 tgattctttaaaaataaat 12112
>gb|AC159272.2| Mus musculus BAC clone RP23-423J20 from chromosome 13, complete sequence Length = 186588 Score = 38.2 bits (19), Expect = 4.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 49 ctttgattctttaaaaata 67 ||||||||||||||||||| Sbjct: 148714 ctttgattctttaaaaata 148732
>gb|AC144928.17| Medicago truncatula clone mth2-8a18, complete sequence Length = 138948 Score = 38.2 bits (19), Expect = 4.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 51 ttgattctttaaaaataaa 69 ||||||||||||||||||| Sbjct: 18284 ttgattctttaaaaataaa 18302
>emb|AL589943.26| Human DNA sequence from clone RP11-44D23 on chromosome 10, complete sequence Length = 139325 Score = 38.2 bits (19), Expect = 4.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 54 attctttaaaaataaataa 72 ||||||||||||||||||| Sbjct: 98134 attctttaaaaataaataa 98152
>emb|AL590727.5| Human DNA sequence from clone RP11-111D3 on chromosome 6 Contains a eukaryotic translation initiation factor 4E binding protein pseudogene and part of a novel gene, complete sequence Length = 127913 Score = 38.2 bits (19), Expect = 4.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 52 tgattctttaaaaataaat 70 ||||||||||||||||||| Sbjct: 48866 tgattctttaaaaataaat 48884
>emb|AL512274.9| Human DNA sequence from clone RP11-7K24 on chromosome 6 Contains the 3' end of the gene for a novel protein similar to prodos protein, the gene for a novel protein and a CpG island, complete sequence Length = 79319 Score = 38.2 bits (19), Expect = 4.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 47 aactttgattctttaaaaa 65 ||||||||||||||||||| Sbjct: 4887 aactttgattctttaaaaa 4905
>emb|AL451132.9| Human DNA sequence from clone RP11-7N10 on chromosome 9 Contains a pseudogene similar to part of serine/threonine kinase 33 (STK33), complete sequence Length = 69362 Score = 38.2 bits (19), Expect = 4.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 47 aactttgattctttaaaaa 65 ||||||||||||||||||| Sbjct: 32148 aactttgattctttaaaaa 32130
>emb|AL441886.18| Human DNA sequence from clone RP11-287G8 on chromosome 10 Contains the 5'end of gene KIAA1010, the 3'end of gene FLJ40792, the CPN1 gene for carboxypeptidase N, polypeptide 1, 50 kD and a CpG island, complete sequence Length = 135932 Score = 38.2 bits (19), Expect = 4.8 Identities = 22/23 (95%) Strand = Plus / Plus Query: 45 ttaactttgattctttaaaaata 67 |||||||||||| |||||||||| Sbjct: 24315 ttaactttgattgtttaaaaata 24337
>emb|AL160033.21| Human DNA sequence from clone RP11-480K16 on chromosome 13 Contains the 5' end of a novel gene, a novel gene, the 3' end of the TUBGCP3 gene for tubulin gamma complex associated protein 3 and two CpG islands, complete sequence Length = 182362 Score = 38.2 bits (19), Expect = 4.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 45 ttaactttgattctttaaa 63 ||||||||||||||||||| Sbjct: 60193 ttaactttgattctttaaa 60211
>emb|AL139092.12| Human DNA sequence from clone RP11-420G6 on chromosome 6 Contains the gene for werners helicase interacting protein (WHIP) (RUVBL), the SERPINB1 gene for serine (or cysteine) proteinase inhibitor clade B (ovalbumin) member 1, a putative novel gene and the 3' end of a putative novel gene, complete sequence Length = 168147 Score = 38.2 bits (19), Expect = 4.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 50 tttgattctttaaaaataa 68 ||||||||||||||||||| Sbjct: 92611 tttgattctttaaaaataa 92629
>emb|AL031782.1|HS708F5 Human DNA sequence from clone RP4-708F5 on chromosome 6p11.2-12.3 Contains part of the COL21A1 gene for collagen, type XXI, alpha 1 (collagen XXI, collagen, type XX, alpha 1, COLA1L, COL20A1, DKFZp564B052), complete sequence Length = 126501 Score = 38.2 bits (19), Expect = 4.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 54 attctttaaaaataaataa 72 ||||||||||||||||||| Sbjct: 64479 attctttaaaaataaataa 64497
>emb|BX572094.1| Prochlorococcus marinus MED4 complete genome; segment 5/5 Length = 262202 Score = 38.2 bits (19), Expect = 4.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 50 tttgattctttaaaaataa 68 ||||||||||||||||||| Sbjct: 200655 tttgattctttaaaaataa 200673
>emb|AL662995.2|OSJN00202 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0032D24, complete sequence Length = 132465 Score = 38.2 bits (19), Expect = 4.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 56 tctttaaaaataaataagc 74 ||||||||||||||||||| Sbjct: 53664 tctttaaaaataaataagc 53682
>emb|AL662853.16| Mouse DNA sequence from clone RP23-293J16 on chromosome 11 Contains the Kremen gene for kringle containing transmembrane protein, the 3' end of a novel gene and a CpG island, complete sequence Length = 198703 Score = 38.2 bits (19), Expect = 4.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 86 cccaacataaaagtccaac 104 ||||||||||||||||||| Sbjct: 79370 cccaacataaaagtccaac 79388
>gb|BC074095.1| Danio rerio major histocompatibility complex class I UBA gene, mRNA (cDNA clone MGC:91955 IMAGE:7041416), complete cds Length = 1905 Score = 38.2 bits (19), Expect = 4.8 Identities = 22/23 (95%) Strand = Plus / Plus Query: 50 tttgattctttaaaaataaataa 72 ||||||||||| ||||||||||| Sbjct: 1846 tttgattcttttaaaataaataa 1868
>emb|BX914219.10| Zebrafish DNA sequence from clone DKEY-88A11 in linkage group 13, complete sequence Length = 126004 Score = 38.2 bits (19), Expect = 4.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 54 attctttaaaaataaataa 72 ||||||||||||||||||| Sbjct: 103903 attctttaaaaataaataa 103885
>emb|AL590150.2| Zebrafish DNA sequence from clone RP71-3C13 in linkage group 4 Contains the 3' end of the ube2h gene for ubiquitin-conjugating enzyme E2H (UBC8 homolog, yeast), a novel gene, the nrf1 gene for nuclear respiratory factor 1 and two CpG islands, complete sequence Length = 148777 Score = 38.2 bits (19), Expect = 4.8 Identities = 22/23 (95%) Strand = Plus / Minus Query: 52 tgattctttaaaaataaataagc 74 ||||| ||||||||||||||||| Sbjct: 97498 tgattttttaaaaataaataagc 97476
>gb|AC123779.5| Homo sapiens chromosome 8, clone RP11-687D20, complete sequence Length = 168640 Score = 38.2 bits (19), Expect = 4.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 55 ttctttaaaaataaataag 73 ||||||||||||||||||| Sbjct: 25488 ttctttaaaaataaataag 25470
>gb|AC107909.5| Homo sapiens chromosome 8, clone CTD-2340D6, complete sequence Length = 149001 Score = 38.2 bits (19), Expect = 4.8 Identities = 22/23 (95%) Strand = Plus / Plus Query: 50 tttgattctttaaaaataaataa 72 |||||||||||||||||| |||| Sbjct: 76252 tttgattctttaaaaatacataa 76274
>gb|AC105195.5| Homo sapiens chromosome 8, clone RP11-480J6, complete sequence Length = 167834 Score = 38.2 bits (19), Expect = 4.8 Identities = 22/23 (95%) Strand = Plus / Plus Query: 50 tttgattctttaaaaataaataa 72 |||||||||||||||||| |||| Sbjct: 43683 tttgattctttaaaaatacataa 43705
>emb|BX950856.4| Zebrafish DNA sequence from clone DKEY-205L20 in linkage group 5, complete sequence Length = 147456 Score = 38.2 bits (19), Expect = 4.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 54 attctttaaaaataaataa 72 ||||||||||||||||||| Sbjct: 120132 attctttaaaaataaataa 120114
>gb|AC182461.3| Pan troglodytes BAC clone CH251-673H10 from chromosome 6, complete sequence Length = 188415 Score = 38.2 bits (19), Expect = 4.8 Identities = 22/23 (95%) Strand = Plus / Plus Query: 50 tttgattctttaaaaataaataa 72 |||| |||||||||||||||||| Sbjct: 71911 tttgcttctttaaaaataaataa 71933
>gb|AC105416.3| Homo sapiens BAC clone RP11-310A13 from 4, complete sequence Length = 123331 Score = 38.2 bits (19), Expect = 4.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 54 attctttaaaaataaataa 72 ||||||||||||||||||| Sbjct: 60886 attctttaaaaataaataa 60904
>emb|BX323032.6| Zebrafish DNA sequence from clone DKEYP-7C3 in linkage group 2, complete sequence Length = 167106 Score = 38.2 bits (19), Expect = 4.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 54 attctttaaaaataaataa 72 ||||||||||||||||||| Sbjct: 50056 attctttaaaaataaataa 50038
>gb|AC044782.6| Homo sapiens chromosome 10 clone RP11-170M17, complete sequence Length = 149041 Score = 38.2 bits (19), Expect = 4.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 55 ttctttaaaaataaataag 73 ||||||||||||||||||| Sbjct: 59212 ttctttaaaaataaataag 59194
>gb|AC069020.8| Homo sapiens chromosome 10 clone RP11-165K20, complete sequence Length = 171413 Score = 38.2 bits (19), Expect = 4.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 54 attctttaaaaataaataa 72 ||||||||||||||||||| Sbjct: 41310 attctttaaaaataaataa 41292
>gb|AC069543.5| Homo sapiens chromosome 10 clone RP11-393H5, complete sequence Length = 179789 Score = 38.2 bits (19), Expect = 4.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 55 ttctttaaaaataaataag 73 ||||||||||||||||||| Sbjct: 148114 ttctttaaaaataaataag 148132
>ref|NM_057377.3| Drosophila melanogaster seven in absentia CG9949-RA, transcript variant A (sina), mRNA Length = 4435 Score = 38.2 bits (19), Expect = 4.8 Identities = 22/23 (95%) Strand = Plus / Plus Query: 44 attaactttgattctttaaaaat 66 |||||||||||| |||||||||| Sbjct: 811 attaactttgatcctttaaaaat 833
>gb|AF438327.1| Homo sapiens alpha 1 type XXI collagen precursor (COL21A1) gene, complete cds, alternatively spliced Length = 381696 Score = 38.2 bits (19), Expect = 4.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 54 attctttaaaaataaataa 72 ||||||||||||||||||| Sbjct: 212830 attctttaaaaataaataa 212812
>gb|AC093900.3| Homo sapiens BAC clone RP11-730E1 from 4, complete sequence Length = 152581 Score = 38.2 bits (19), Expect = 4.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 9 ttgaaaagaaaatcgtttg 27 ||||||||||||||||||| Sbjct: 66796 ttgaaaagaaaatcgtttg 66814
>gb|AC010751.5| Drosophila melanogaster 3L BAC RP98-9A23 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 181437 Score = 38.2 bits (19), Expect = 4.8 Identities = 22/23 (95%) Strand = Plus / Minus Query: 44 attaactttgattctttaaaaat 66 |||||||||||| |||||||||| Sbjct: 64090 attaactttgatcctttaaaaat 64068
>emb|BX005461.8| Zebrafish DNA sequence from clone DKEY-192L18 in linkage group 24, complete sequence Length = 162216 Score = 38.2 bits (19), Expect = 4.8 Identities = 22/23 (95%) Strand = Plus / Minus Query: 38 caggtcattaactttgattcttt 60 ||||||||||||||||| ||||| Sbjct: 9066 caggtcattaactttgactcttt 9044
>ref|XM_626529.1| Cryptosporidium parvum Iowa II hypothetical protein (cgd2_3390), partial mRNA Length = 495 Score = 38.2 bits (19), Expect = 4.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 51 ttgattctttaaaaataaa 69 ||||||||||||||||||| Sbjct: 461 ttgattctttaaaaataaa 479
>gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete genome Length = 6260361 Score = 38.2 bits (19), Expect = 4.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 57 ctttaaaaataaataagcc 75 ||||||||||||||||||| Sbjct: 5314112 ctttaaaaataaataagcc 5314094
>gb|AC149085.6| Mus musculus BAC clone RP23-191I16 from chromosome 7, complete sequence Length = 208232 Score = 38.2 bits (19), Expect = 4.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 54 attctttaaaaataaataa 72 ||||||||||||||||||| Sbjct: 120771 attctttaaaaataaataa 120789
>dbj|AK081407.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched library, clone:C130014L03 product:RIKEN cDNA 5730406M06 gene, full insert sequence Length = 3470 Score = 38.2 bits (19), Expect = 4.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 54 attctttaaaaataaataa 72 ||||||||||||||||||| Sbjct: 907 attctttaaaaataaataa 889
>gb|L40494.1|GESPLA Gelasinospora sp. G114 mitochondrial plasmid Gel-kalDNA ORF1 and ORF2 genes, complete cds Length = 8231 Score = 38.2 bits (19), Expect = 4.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 54 attctttaaaaataaataa 72 ||||||||||||||||||| Sbjct: 6493 attctttaaaaataaataa 6475
>gb|AF332859.1|AF332859S1 Mus musculus diadenosine triphosphate hydrolase (Fhit) gene, exon 5 and partial cds Length = 270491 Score = 38.2 bits (19), Expect = 4.8 Identities = 22/23 (95%) Strand = Plus / Plus Query: 51 ttgattctttaaaaataaataag 73 ||||||||||||||| ||||||| Sbjct: 240268 ttgattctttaaaaaaaaataag 240290
>gb|AC098872.5| Homo sapiens BAC clone RP11-773P9 from 2, complete sequence Length = 178804 Score = 38.2 bits (19), Expect = 4.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 58 tttaaaaataaataagccc 76 ||||||||||||||||||| Sbjct: 120724 tttaaaaataaataagccc 120706
>gb|AC117176.2| Dictyostelium discoideum chromosome 2 map 5018074-5200947 strain AX4, complete sequence Length = 182871 Score = 38.2 bits (19), Expect = 4.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 51 ttgattctttaaaaataaa 69 ||||||||||||||||||| Sbjct: 127137 ttgattctttaaaaataaa 127119
>gb|AC115682.2| Dictyostelium discoideum chromosome 2 map 4101105-4158643 strain AX4, complete sequence Length = 57538 Score = 38.2 bits (19), Expect = 4.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 54 attctttaaaaataaataa 72 ||||||||||||||||||| Sbjct: 35309 attctttaaaaataaataa 35291
>ref|NM_213698.1| Xenopus tropicalis hypothetical protein MGC69315 (MGC69315), mRNA Length = 1670 Score = 38.2 bits (19), Expect = 4.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 54 attctttaaaaataaataa 72 ||||||||||||||||||| Sbjct: 1603 attctttaaaaataaataa 1621
>gb|AC147220.3| Mus musculus BAC clone RP23-51A20 from chromosome 18, complete sequence Length = 208705 Score = 38.2 bits (19), Expect = 4.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 54 attctttaaaaataaataa 72 ||||||||||||||||||| Sbjct: 72008 attctttaaaaataaataa 72026
>gb|AC013453.1|AC013453 Arabidopsis thaliana chromosome I BAC T16N11 genomic sequence, complete sequence Length = 91001 Score = 38.2 bits (19), Expect = 4.8 Identities = 22/23 (95%) Strand = Plus / Minus Query: 50 tttgattctttaaaaataaataa 72 |||||||||||||||||| |||| Sbjct: 79441 tttgattctttaaaaatatataa 79419
>dbj|BA000022.2| Synechocystis sp. PCC 6803 DNA, complete genome Length = 3573470 Score = 38.2 bits (19), Expect = 4.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 58 tttaaaaataaataagccc 76 ||||||||||||||||||| Sbjct: 2744166 tttaaaaataaataagccc 2744148
>dbj|BA000003.2| Buchnera aphidicola str. APS (Acyrthosiphon pisum) genomic DNA, complete sequence Length = 640681 Score = 38.2 bits (19), Expect = 4.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 51 ttgattctttaaaaataaa 69 ||||||||||||||||||| Sbjct: 248170 ttgattctttaaaaataaa 248152
>emb|BX005447.8| Zebrafish DNA sequence from clone DKEY-29B14, complete sequence Length = 283185 Score = 38.2 bits (19), Expect = 4.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 12 aaaagaaaatcgtttgctc 30 ||||||||||||||||||| Sbjct: 192526 aaaagaaaatcgtttgctc 192544
>emb|BX088551.7| Zebrafish DNA sequence from clone CH211-106A19 in linkage group 5, complete sequence Length = 184417 Score = 38.2 bits (19), Expect = 4.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 12 aaaagaaaatcgtttgctc 30 ||||||||||||||||||| Sbjct: 57768 aaaagaaaatcgtttgctc 57750
>emb|AL928736.5| Zebrafish DNA sequence from clone CH211-202D20, complete sequence Length = 186742 Score = 38.2 bits (19), Expect = 4.8 Identities = 25/27 (92%) Strand = Plus / Minus Query: 42 tcattaactttgattctttaaaaataa 68 ||||||||||| |||| |||||||||| Sbjct: 30723 tcattaactttcattcattaaaaataa 30697
>gb|U91319.1|HSU91319 Human chromosome 16p13.11 BAC clone CIT987SK-98H8 complete sequence Length = 125630 Score = 38.2 bits (19), Expect = 4.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 54 attctttaaaaataaataa 72 ||||||||||||||||||| Sbjct: 8834 attctttaaaaataaataa 8852
>gb|AC123920.4| Mus musculus BAC clone RP24-130L14 from 13, complete sequence Length = 170268 Score = 38.2 bits (19), Expect = 4.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 49 ctttgattctttaaaaata 67 ||||||||||||||||||| Sbjct: 48182 ctttgattctttaaaaata 48200
>emb|AL845510.8| Zebrafish DNA sequence from clone BUSM1-132M23 in linkage group 7, complete sequence Length = 101241 Score = 38.2 bits (19), Expect = 4.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 54 attctttaaaaataaataa 72 ||||||||||||||||||| Sbjct: 14089 attctttaaaaataaataa 14071
>emb|BX510994.6| Zebrafish DNA sequence from clone CH211-51F10 in linkage group 19, complete sequence Length = 186973 Score = 38.2 bits (19), Expect = 4.8 Identities = 22/23 (95%) Strand = Plus / Plus Query: 50 tttgattctttaaaaataaataa 72 ||||||||||| ||||||||||| Sbjct: 40201 tttgattcttttaaaataaataa 40223
>gb|AC006933.3|AC006933 Drosophila melanogaster, chromosome 3L, region 73B7-73D6, BAC clone BACR48E21, complete sequence Length = 186002 Score = 38.2 bits (19), Expect = 4.8 Identities = 22/23 (95%) Strand = Plus / Minus Query: 44 attaactttgattctttaaaaat 66 |||||||||||| |||||||||| Sbjct: 46582 attaactttgatcctttaaaaat 46560
>gb|AE003526.4| Drosophila melanogaster chromosome 3L, section 59 of 83 of the complete sequence Length = 281100 Score = 38.2 bits (19), Expect = 4.8 Identities = 22/23 (95%) Strand = Plus / Plus Query: 44 attaactttgattctttaaaaat 66 |||||||||||| |||||||||| Sbjct: 269512 attaactttgatcctttaaaaat 269534
>gb|AC103353.7| Mus musculus chromosome 12, clone RP23-450G14, complete sequence Length = 191903 Score = 38.2 bits (19), Expect = 4.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 58 tttaaaaataaataagccc 76 ||||||||||||||||||| Sbjct: 61737 tttaaaaataaataagccc 61719
>gb|AC158785.5| Mus musculus chromosome 8, clone RP23-182G15, complete sequence Length = 208815 Score = 38.2 bits (19), Expect = 4.8 Identities = 22/23 (95%) Strand = Plus / Minus Query: 55 ttctttaaaaataaataagccct 77 |||||||||| |||||||||||| Sbjct: 203485 ttctttaaaactaaataagccct 203463
>gb|AC119171.10| Mus musculus chromosome 8, clone RP23-201B1, complete sequence Length = 192853 Score = 38.2 bits (19), Expect = 4.8 Identities = 22/23 (95%) Strand = Plus / Plus Query: 55 ttctttaaaaataaataagccct 77 |||||||||| |||||||||||| Sbjct: 110254 ttctttaaaactaaataagccct 110276
>gb|AC165410.4| Mus musculus chromosome 8, clone RP23-267F17, complete sequence Length = 163899 Score = 38.2 bits (19), Expect = 4.8 Identities = 22/23 (95%) Strand = Plus / Minus Query: 55 ttctttaaaaataaataagccct 77 |||||||||| |||||||||||| Sbjct: 30495 ttctttaaaactaaataagccct 30473
>gb|AF068862.1|AF068862 Homo sapiens BAC clone 157K21 from 8q21, complete sequence Length = 77425 Score = 38.2 bits (19), Expect = 4.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 55 ttctttaaaaataaataag 73 ||||||||||||||||||| Sbjct: 53559 ttctttaaaaataaataag 53541
>gb|AY391782.2| Ctenopharyngodon idella MHC class I antigen mRNA, complete cds Length = 2033 Score = 38.2 bits (19), Expect = 4.8 Identities = 22/23 (95%) Strand = Plus / Plus Query: 50 tttgattctttaaaaataaataa 72 |||||||||| |||||||||||| Sbjct: 1960 tttgattcttgaaaaataaataa 1982
>emb|AL645797.11| Mouse DNA sequence from clone RP23-153J5 on chromosome 11 Contains a novel gene and a CpG island, complete sequence Length = 190784 Score = 38.2 bits (19), Expect = 4.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 58 tttaaaaataaataagccc 76 ||||||||||||||||||| Sbjct: 117671 tttaaaaataaataagccc 117689
>gb|AC140948.1| Gallus gallus BAC clone TAM31-60A4 from chromosome ul, complete sequence Length = 91737 Score = 38.2 bits (19), Expect = 4.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 54 attctttaaaaataaataa 72 ||||||||||||||||||| Sbjct: 1192 attctttaaaaataaataa 1174
>gb|AC133709.11| Medicago truncatula clone mth2-7b3, complete sequence Length = 138950 Score = 38.2 bits (19), Expect = 4.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 51 ttgattctttaaaaataaa 69 ||||||||||||||||||| Sbjct: 120666 ttgattctttaaaaataaa 120648
>gb|U17243.1|YSCL8003 Saccharomyces cerevisiae chromosome XII cosmid 8003 Length = 40214 Score = 38.2 bits (19), Expect = 4.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 51 ttgattctttaaaaataaa 69 ||||||||||||||||||| Sbjct: 28294 ttgattctttaaaaataaa 28276
>emb|CR940308.12| M.truncatula DNA sequence from clone MTH2-17G23 on chromosome 3, complete sequence Length = 121494 Score = 38.2 bits (19), Expect = 4.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 51 ttgattctttaaaaataaa 69 ||||||||||||||||||| Sbjct: 85722 ttgattctttaaaaataaa 85704
>gb|AC159308.4| Mus musculus BAC clone RP23-187B11 from chromosome 9, complete sequence Length = 217927 Score = 38.2 bits (19), Expect = 4.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 54 attctttaaaaataaataa 72 ||||||||||||||||||| Sbjct: 156379 attctttaaaaataaataa 156361
>gb|AC138622.4| Mus musculus BAC clone RP23-100J15 from chromosome 6, complete sequence Length = 194611 Score = 38.2 bits (19), Expect = 4.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 56 tctttaaaaataaataagc 74 ||||||||||||||||||| Sbjct: 172689 tctttaaaaataaataagc 172671
>emb|AL929083.8| Mouse DNA sequence from clone RP23-436E15 on chromosome 2, complete sequence Length = 84875 Score = 38.2 bits (19), Expect = 4.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 53 gattctttaaaaataaata 71 ||||||||||||||||||| Sbjct: 32800 gattctttaaaaataaata 32818
>emb|AL713885.1|CNS07YP2 Mus musculus chromosome 11 region in the Om locus area (D11Mit37-Scya6) clone 330D23 of library Caltech CITB-BAC from chromosome 11 of Mus musculus (mouse) Length = 181075 Score = 38.2 bits (19), Expect = 4.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 58 tttaaaaataaataagccc 76 ||||||||||||||||||| Sbjct: 74446 tttaaaaataaataagccc 74428
>emb|AL713884.1|CNS07YP1 Mus musculus chromosome 11 region in the Om locus area (D11Mit37-Scya6) clone 205M5 of library Caltech CITB-BAC from chromosome 11 of Mus musculus (mouse) Length = 120637 Score = 38.2 bits (19), Expect = 4.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 58 tttaaaaataaataagccc 76 ||||||||||||||||||| Sbjct: 14016 tttaaaaataaataagccc 13998
>emb|AL713841.1|CNS07YOV Mus musculus chromosome 11 region in the Om locus area (D11Mit37-Scya6) clone 261D24 of library Caltech CITB-BAC from chromosome 11 of Mus musculus (mouse) Length = 92785 Score = 38.2 bits (19), Expect = 4.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 58 tttaaaaataaataagccc 76 ||||||||||||||||||| Sbjct: 46258 tttaaaaataaataagccc 46276
>emb|AL772187.6| Mouse DNA sequence from clone RP23-38K18 on chromosome 4, complete sequence Length = 230409 Score = 38.2 bits (19), Expect = 4.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 54 attctttaaaaataaataa 72 ||||||||||||||||||| Sbjct: 140973 attctttaaaaataaataa 140955
>emb|AL928741.2| Mouse DNA sequence from clone RP23-264P3 on chromosome 2, complete sequence Length = 185830 Score = 38.2 bits (19), Expect = 4.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 48 actttgattctttaaaaat 66 ||||||||||||||||||| Sbjct: 168517 actttgattctttaaaaat 168499
>gb|AY863213.1| Smittium culisetae mitochondrion, complete genome Length = 58654 Score = 38.2 bits (19), Expect = 4.8 Identities = 22/23 (95%) Strand = Plus / Minus Query: 48 actttgattctttaaaaataaat 70 ||||||||| ||||||||||||| Sbjct: 50229 actttgattatttaaaaataaat 50207
>gb|M38384.1|DROSINA Drosophila melanogaster seven in absentia mRNA, complete cds Length = 4440 Score = 38.2 bits (19), Expect = 4.8 Identities = 22/23 (95%) Strand = Plus / Plus Query: 44 attaactttgattctttaaaaat 66 |||||||||||| |||||||||| Sbjct: 811 attaactttgatcctttaaaaat 833
>dbj|AP004294.1| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1651H12 Length = 180236 Score = 38.2 bits (19), Expect = 4.8 Identities = 22/23 (95%) Strand = Plus / Plus Query: 50 tttgattctttaaaaataaataa 72 |||||||||||||||||| |||| Sbjct: 114257 tttgattctttaaaaatacataa 114279 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,508,300 Number of Sequences: 3902068 Number of extensions: 2508300 Number of successful extensions: 240170 Number of sequences better than 10.0: 155 Number of HSP's better than 10.0 without gapping: 156 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 239405 Number of HSP's gapped (non-prelim): 765 length of query: 106 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 85 effective length of database: 17,151,101,840 effective search space: 1457843656400 effective search space used: 1457843656400 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)
