ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbastl54e12 |
|---|---|
| Clone Library Name | barley_pub |
>ODO1_CAEBR (Q623T0) 2-oxoglutarate dehydrogenase E1 component, mitochondrial| precursor (EC 1.2.4.2) (Alpha-ketoglutarate dehydrogenase) Length = 1027 Score = 36.2 bits (82), Expect = 0.021 Identities = 16/29 (55%), Positives = 21/29 (72%) Frame = -2 Query: 292 KYAGRAPSAATATGFYTVHVQEQTELVKK 206 KYAGR PS++ ATG H+QEQ E++ K Sbjct: 985 KYAGRLPSSSPATGNKYTHMQEQKEMMSK 1013
>ODO1_CAEEL (O61199) 2-oxoglutarate dehydrogenase E1 component, mitochondrial| precursor (EC 1.2.4.2) (Alpha-ketoglutarate dehydrogenase) Length = 1029 Score = 36.2 bits (82), Expect = 0.021 Identities = 16/29 (55%), Positives = 21/29 (72%) Frame = -2 Query: 292 KYAGRAPSAATATGFYTVHVQEQTELVKK 206 KYAGR PS++ ATG H+QEQ E++ K Sbjct: 987 KYAGRLPSSSPATGNKFTHMQEQKEMMSK 1015
>ODO1_HAEIN (P45303) 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)| (Alpha-ketoglutarate dehydrogenase) Length = 935 Score = 36.2 bits (82), Expect = 0.021 Identities = 15/32 (46%), Positives = 24/32 (75%) Frame = -2 Query: 295 IKYAGRAPSAATATGFYTVHVQEQTELVKKAL 200 +KYAGR SA+ A G+ ++H ++Q +LV+ AL Sbjct: 902 LKYAGRPASASPAVGYMSLHTKQQKQLVEDAL 933
>ODO1_ECOLI (P0AFG3) 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)| (Alpha-ketoglutarate dehydrogenase) Length = 933 Score = 35.0 bits (79), Expect = 0.047 Identities = 15/32 (46%), Positives = 23/32 (71%) Frame = -2 Query: 295 IKYAGRAPSAATATGFYTVHVQEQTELVKKAL 200 ++YAGR SA+ A G+ +VH ++Q +LV AL Sbjct: 899 LRYAGRPASASPAVGYMSVHQKQQQDLVNDAL 930
>ODO1_ECOL6 (P0AFG4) 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)| (Alpha-ketoglutarate dehydrogenase) Length = 933 Score = 35.0 bits (79), Expect = 0.047 Identities = 15/32 (46%), Positives = 23/32 (71%) Frame = -2 Query: 295 IKYAGRAPSAATATGFYTVHVQEQTELVKKAL 200 ++YAGR SA+ A G+ +VH ++Q +LV AL Sbjct: 899 LRYAGRPASASPAVGYMSVHQKQQQDLVNDAL 930
>ODO1_ECO57 (P0AFG5) 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)| (Alpha-ketoglutarate dehydrogenase) Length = 933 Score = 35.0 bits (79), Expect = 0.047 Identities = 15/32 (46%), Positives = 23/32 (71%) Frame = -2 Query: 295 IKYAGRAPSAATATGFYTVHVQEQTELVKKAL 200 ++YAGR SA+ A G+ +VH ++Q +LV AL Sbjct: 899 LRYAGRPASASPAVGYMSVHQKQQQDLVNDAL 930
>ODO1_BUCAI (P57388) 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)| (Alpha-ketoglutarate dehydrogenase) Length = 909 Score = 32.7 bits (73), Expect = 0.23 Identities = 12/32 (37%), Positives = 23/32 (71%) Frame = -2 Query: 295 IKYAGRAPSAATATGFYTVHVQEQTELVKKAL 200 +KY GR+ SA+ A G+ ++H ++Q +++ AL Sbjct: 875 LKYIGRSSSASPAVGYISIHKKQQEKIIYNAL 906
>ODO1_AZOVI (P20707) 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)| (Alpha-ketoglutarate dehydrogenase) Length = 943 Score = 32.3 bits (72), Expect = 0.31 Identities = 13/31 (41%), Positives = 23/31 (74%) Frame = -2 Query: 295 IKYAGRAPSAATATGFYTVHVQEQTELVKKA 203 ++YAGR SAA A G+ ++H ++Q +L++ A Sbjct: 910 LQYAGREASAAPACGYASMHAEQQEKLLQDA 940
>ODO1_BUCBP (Q89AJ7) Oxoglutarate dehydrogenase (EC 1.2.4.2)| Length = 916 Score = 32.3 bits (72), Expect = 0.31 Identities = 12/32 (37%), Positives = 22/32 (68%) Frame = -2 Query: 295 IKYAGRAPSAATATGFYTVHVQEQTELVKKAL 200 + Y GR+ SA+ ATG+ +H ++Q +++ AL Sbjct: 881 LNYVGRSSSASPATGYMKIHKEQQKKIIYDAL 912
>ODO1_LEPIN (Q8F6S7) 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)| (Alpha-ketoglutarate dehydrogenase) Length = 920 Score = 31.2 bits (69), Expect = 0.68 Identities = 15/31 (48%), Positives = 19/31 (61%) Frame = -2 Query: 289 YAGRAPSAATATGFYTVHVQEQTELVKKALQ 197 YAGR S + A G +H+QEQ +LV A Q Sbjct: 889 YAGRHESPSPAAGHMKLHLQEQDQLVLDAFQ 919
>ODO1_LEPIC (Q72PJ7) 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)| (Alpha-ketoglutarate dehydrogenase) Length = 920 Score = 31.2 bits (69), Expect = 0.68 Identities = 15/31 (48%), Positives = 19/31 (61%) Frame = -2 Query: 289 YAGRAPSAATATGFYTVHVQEQTELVKKALQ 197 YAGR S + A G +H+QEQ +LV A Q Sbjct: 889 YAGRHESPSPAAGHMKLHLQEQDQLVLDAFQ 919
>ODO1_MACFA (Q60HE2) 2-oxoglutarate dehydrogenase E1 component, mitochondrial| precursor (EC 1.2.4.2) (Alpha-ketoglutarate dehydrogenase) Length = 1023 Score = 30.8 bits (68), Expect = 0.89 Identities = 16/37 (43%), Positives = 20/37 (54%) Frame = -2 Query: 289 YAGRAPSAATATGFYTVHVQEQTELVKKALQPDPIKS 179 YAGR P+AA ATG H+ E L+ A D K+ Sbjct: 985 YAGRDPAAAPATGNKKTHLTELQRLLDTAFDLDVFKN 1021
>ODO1_RALEU (Q59106) 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)| (Alpha-ketoglutarate dehydrogenase) Length = 950 Score = 30.4 bits (67), Expect = 1.2 Identities = 13/29 (44%), Positives = 19/29 (65%) Frame = -2 Query: 289 YAGRAPSAATATGFYTVHVQEQTELVKKA 203 YAGR SA+ A G+Y H ++Q L++ A Sbjct: 911 YAGRPASASPAVGYYAKHNEQQKALLEAA 939
>ODO1_PONPY (Q5RCB8) 2-oxoglutarate dehydrogenase E1 component, mitochondrial| precursor (EC 1.2.4.2) (Alpha-ketoglutarate dehydrogenase) Length = 1023 Score = 30.4 bits (67), Expect = 1.2 Identities = 16/37 (43%), Positives = 20/37 (54%) Frame = -2 Query: 289 YAGRAPSAATATGFYTVHVQEQTELVKKALQPDPIKS 179 YAGR P+AA ATG H+ E L+ A D K+ Sbjct: 985 YAGRDPAAAPATGNKKTHLTELQRLLDTAFDLDIFKN 1021
>ODO1_MOUSE (Q60597) 2-oxoglutarate dehydrogenase E1 component, mitochondrial| precursor (EC 1.2.4.2) (Alpha-ketoglutarate dehydrogenase) Length = 1019 Score = 30.0 bits (66), Expect = 1.5 Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 3/47 (6%) Frame = -2 Query: 313 RGSIDDIK---YAGRAPSAATATGFYTVHVQEQTELVKKALQPDPIK 182 R +ID K YAGR P+AA ATG H+ E + A D K Sbjct: 970 RTTIDRAKPVWYAGRDPAAAPATGNKKTHLTELQRFLDTAFDLDAFK 1016
>TNF10_HUMAN (P50591) Tumor necrosis factor ligand superfamily member 10| (TNF-related apoptosis-inducing ligand) (TRAIL protein) (Apo-2 ligand) (Apo-2L) (CD253 antigen) Length = 281 Score = 29.6 bits (65), Expect = 2.0 Identities = 10/24 (41%), Positives = 17/24 (70%) Frame = +3 Query: 117 SAW*EIRSSHGYAKNLHVQNGDLM 188 ++W RS H + NLH++NG+L+ Sbjct: 152 NSWESSRSGHSFLSNLHLRNGELV 175
>ATU_DROME (Q94546) Another transcription unit protein| Length = 725 Score = 28.9 bits (63), Expect = 3.4 Identities = 18/49 (36%), Positives = 26/49 (53%) Frame = -3 Query: 192 TPSSPRSERVGSLHSHESF*SPTMQKNNRSKLQPFGE*SLRMCGTARVR 46 TP SP+S R GSL S +S SP +++ + + G R G+A R Sbjct: 104 TPESPQSHRSGSLQSRKSG-SPQSRRSGSPQSRKSGSTHSRRSGSAHSR 151
>GLGA_BACST (O08328) Glycogen synthase (EC 2.4.1.21) (Starch [bacterial| glycogen] synthase) Length = 485 Score = 28.5 bits (62), Expect = 4.4 Identities = 17/36 (47%), Positives = 22/36 (61%) Frame = -2 Query: 304 IDDIKYAGRAPSAATATGFYTVHVQEQTELVKKALQ 197 IDD Y A TAT Y+VH +E+ +L K+ALQ Sbjct: 249 IDDEFYNPEADPFLTAT--YSVHTRERKQLNKRALQ 282
>ODO1_GEOKA (Q5L172) 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)| (Alpha-ketoglutarate dehydrogenase) Length = 950 Score = 27.7 bits (60), Expect = 7.5 Identities = 13/33 (39%), Positives = 19/33 (57%) Frame = -2 Query: 298 DIKYAGRAPSAATATGFYTVHVQEQTELVKKAL 200 D+ Y GR A+ A G VH +EQ +++ AL Sbjct: 914 DVSYIGRRRRASPAEGDPVVHRKEQERIIRCAL 946
>CABL1_MOUSE (Q9ESJ1) CDK5 and ABL1 enzyme substrate 1 (Interactor with CDK3 1)| (Ik3-1) Length = 568 Score = 27.7 bits (60), Expect = 7.5 Identities = 14/44 (31%), Positives = 21/44 (47%) Frame = +3 Query: 183 LMGSGCSAFFTSSVCSCTWTV*KPVAVAADGALPAYLISSMLPR 314 L+ +GC+AF + WT A G+ P L S++PR Sbjct: 99 LLAAGCNAFSAPGTAAAPWT-------AGSGSSPCPLPPSLVPR 135
>ODO1_BRUSU (Q8FYF7) 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)| (Alpha-ketoglutarate dehydrogenase) Length = 1004 Score = 27.3 bits (59), Expect = 9.9 Identities = 11/32 (34%), Positives = 20/32 (62%) Frame = -2 Query: 295 IKYAGRAPSAATATGFYTVHVQEQTELVKKAL 200 ++YAGR +A+ ATG + H+ + ++ AL Sbjct: 972 VRYAGRPAAASPATGLMSKHLAQLAAFLEDAL 1003
>ODO1_BRUME (Q8YJE4) 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)| (Alpha-ketoglutarate dehydrogenase) Length = 1004 Score = 27.3 bits (59), Expect = 9.9 Identities = 11/32 (34%), Positives = 20/32 (62%) Frame = -2 Query: 295 IKYAGRAPSAATATGFYTVHVQEQTELVKKAL 200 ++YAGR +A+ ATG + H+ + ++ AL Sbjct: 972 VRYAGRPAAASPATGLMSKHLAQLAAFLEDAL 1003 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 44,505,683 Number of Sequences: 219361 Number of extensions: 770705 Number of successful extensions: 1639 Number of sequences better than 10.0: 22 Number of HSP's better than 10.0 without gapping: 1627 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1638 length of database: 80,573,946 effective HSP length: 82 effective length of database: 62,586,344 effective search space used: 1502072256 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
