ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl54e11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ZNF26_HUMAN (P17031) Zinc finger protein 26 (Zinc finger protein... 28 5.0
2ASPG2_ARATH (Q8GXG1) Probable L-asparaginase 2 precursor (EC 3.5... 28 5.0

>ZNF26_HUMAN (P17031) Zinc finger protein 26 (Zinc finger protein KOX20)|
          Length = 199

 Score = 28.5 bits (62), Expect = 5.0
 Identities = 11/39 (28%), Positives = 19/39 (48%)
 Frame = +2

Query: 32  KRSDCTDLYQIRMKITDHTRILASQTMTKMSACPASSCW 148
           K S+C   +  +  +++H R+   +   K S C  S CW
Sbjct: 149 KCSECGKAFTQKSSLSEHQRVHTGEKPWKCSECGKSFCW 187



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>ASPG2_ARATH (Q8GXG1) Probable L-asparaginase 2 precursor (EC 3.5.1.1)|
           (L-asparagine amidohydrolase 2) [Contains:
           L-asparaginase 2 alpha subunit; L-asparaginase 2 beta
           subunit]
          Length = 325

 Score = 28.5 bits (62), Expect = 5.0
 Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
 Frame = +1

Query: 76  YRPYTYTCITNDDKNECVSGEFLLGIVTSQM-YVLSSPIILAG 201
           Y P T  C+  D K  C +G    G++   M  +  SP+I AG
Sbjct: 191 YAPETVGCVVVDGKGHCAAGTSTGGLMNKMMGRIGDSPLIGAG 233


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,829,278
Number of Sequences: 219361
Number of extensions: 448680
Number of successful extensions: 1161
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1131
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1161
length of database: 80,573,946
effective HSP length: 42
effective length of database: 71,360,784
effective search space used: 1712658816
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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