Clone Name | rbastl54e11 |
---|---|
Clone Library Name | barley_pub |
>emb|CR354401.17| Zebrafish DNA sequence from clone CH211-101C7 in linkage group 12, complete sequence Length = 168372 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 152 tagttacatcacaaatgtat 171 |||||||||||||||||||| Sbjct: 110978 tagttacatcacaaatgtat 110959
>emb|CR293518.13| Zebrafish DNA sequence from clone CH211-129L10 in linkage group 12, complete sequence Length = 196374 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 152 tagttacatcacaaatgtat 171 |||||||||||||||||||| Sbjct: 146452 tagttacatcacaaatgtat 146433
>gb|AC113188.6| Homo sapiens chromosome 8, clone CTD-2546M19, complete sequence Length = 194602 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 tttcctcgcccatcatcttg 195 |||||||||||||||||||| Sbjct: 46859 tttcctcgcccatcatcttg 46840
>gb|AC160650.2| Pan troglodytes BAC clone CH251-548K10 from chromosome unknown, complete sequence Length = 184125 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 tttcctcgcccatcatcttg 195 |||||||||||||||||||| Sbjct: 61040 tttcctcgcccatcatcttg 61021
>gb|AC163744.3| Pan troglodytes BAC clone CH251-376E11 from chromosome unknown, complete sequence Length = 195342 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 176 tttcctcgcccatcatcttg 195 |||||||||||||||||||| Sbjct: 45594 tttcctcgcccatcatcttg 45613
>gb|AC175061.3| Pan troglodytes BAC clone CH251-572M8 from chromosome unknown, complete sequence Length = 191409 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 tttcctcgcccatcatcttg 195 |||||||||||||||||||| Sbjct: 161527 tttcctcgcccatcatcttg 161508
>gb|AC084637.1|CBRG45I03 Caenorhabditis briggsae cosmid G45I03, complete sequence Length = 39132 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 caaaattccaaatttcattg 24 |||||||||||||||||||| Sbjct: 28489 caaaattccaaatttcattg 28470
>emb|CT573313.6| H.melpomene DNA sequence from clone AEHM-46M10, complete sequence Length = 112576 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 152 tagttacatcacaaatgtat 171 |||||||||||||||||||| Sbjct: 41211 tagttacatcacaaatgtat 41192
>emb|AL844531.6| Mouse DNA sequence from clone RP23-211J18 on chromosome 2, complete sequence Length = 181194 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 caaaattccaaatttcattg 24 |||||||||||||||||||| Sbjct: 57411 caaaattccaaatttcattg 57430
>dbj|AP004295.1| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1907E5 Length = 154597 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 tttcctcgcccatcatcttg 195 |||||||||||||||||||| Sbjct: 136737 tttcctcgcccatcatcttg 136718 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,861,971 Number of Sequences: 3902068 Number of extensions: 1861971 Number of successful extensions: 130982 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 10 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 130960 Number of HSP's gapped (non-prelim): 22 length of query: 201 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 179 effective length of database: 17,147,199,772 effective search space: 3069348759188 effective search space used: 3069348759188 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)