>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9,
              complete sequence
          Length = 22696651

 Score = 95.6 bits (48), Expect = 9e-17
 Identities = 93/108 (86%)
 Strand = Plus / Plus

                                                                          
Query: 234    catgggcaactcaaagcagacataattccagtaatcaactaacttgtgatcatcaggtac 293
              |||||||||||| || || ||||| |||||||||||||||||||| || ||  |||||||
Sbjct: 193665 catgggcaactcgaaacaaacatatttccagtaatcaactaacttatggtctgcaggtac 193724

                                                              
Query: 294    cacctccctcgccctacccgaacaaaatattgcataagcatcagctgc 341
              ||||||  | ||||| |||| ||| || ||||||||||||||||||||
Sbjct: 193725 cacctctgttgccctgcccgcacagaagattgcataagcatcagctgc 193772

>dbj|AP006058.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OSJNBa0066B16
          Length = 190143

 Score = 95.6 bits (48), Expect = 9e-17
 Identities = 93/108 (86%)
 Strand = Plus / Plus

                                                                         
Query: 234   catgggcaactcaaagcagacataattccagtaatcaactaacttgtgatcatcaggtac 293
             |||||||||||| || || ||||| |||||||||||||||||||| || ||  |||||||
Sbjct: 89163 catgggcaactcgaaacaaacatatttccagtaatcaactaacttatggtctgcaggtac 89222

                                                             
Query: 294   cacctccctcgccctacccgaacaaaatattgcataagcatcagctgc 341
             ||||||  | ||||| |||| ||| || ||||||||||||||||||||
Sbjct: 89223 cacctctgttgccctgcccgcacagaagattgcataagcatcagctgc 89270

>dbj|AK120565.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013133J10, full
            insert sequence
          Length = 3753

 Score = 95.6 bits (48), Expect = 9e-17
 Identities = 93/108 (86%)
 Strand = Plus / Minus

                                                                        
Query: 234  catgggcaactcaaagcagacataattccagtaatcaactaacttgtgatcatcaggtac 293
            |||||||||||| || || ||||| |||||||||||||||||||| || ||  |||||||
Sbjct: 1293 catgggcaactcgaaacaaacatatttccagtaatcaactaacttatggtctgcaggtac 1234

                                                            
Query: 294  cacctccctcgccctacccgaacaaaatattgcataagcatcagctgc 341
            ||||||  | ||||| |||| ||| || ||||||||||||||||||||
Sbjct: 1233 cacctctgttgccctgcccgcacagaagattgcataagcatcagctgc 1186

>gb|AC099706.8| Mus musculus, clone RP23-267P24, complete sequence
          Length = 168307

 Score = 46.1 bits (23), Expect = 0.073
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 313    gaacaaaatattgcataagcatc 335
              |||||||||||||||||||||||
Sbjct: 120687 gaacaaaatattgcataagcatc 120709

>gb|AC166749.6| Mus musculus chromosome 1, clone RP23-463A15, complete sequence
          Length = 186262

 Score = 46.1 bits (23), Expect = 0.073
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 313    gaacaaaatattgcataagcatc 335
              |||||||||||||||||||||||
Sbjct: 172916 gaacaaaatattgcataagcatc 172938

>emb|AL445198.13| Human DNA sequence from clone RP11-288F8 on chromosome 1 Contains part
             of the NFIA gene for nuclear factor I/A, complete sequence
          Length = 78404

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 205   atactggaactgaactaatcca 226
             ||||||||||||||||||||||
Sbjct: 78037 atactggaactgaactaatcca 78058

>emb|AL137855.10| Human DNA sequence from clone RP5-1064J9 on chromosome 1p32.2-33,
             complete sequence
          Length = 106970

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 314   aacaaaatattgcataagcat 334
             |||||||||||||||||||||
Sbjct: 24072 aacaaaatattgcataagcat 24092

>gb|AC153365.7| Mus musculus 10 BAC RP23-273K11 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 207891

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 49     aatatcatctcaagcttaaca 69
              |||||||||||||||||||||
Sbjct: 111727 aatatcatctcaagcttaaca 111747

>gb|AC094571.8| Rattus norvegicus 20 BAC CH230-4L21 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 230137

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 171   ccacagctgcttccccttgc 190
             ||||||||||||||||||||
Sbjct: 60236 ccacagctgcttccccttgc 60255

>emb|AL160168.11| Human DNA sequence from clone RP11-394O9 on chromosome 9, complete
              sequence
          Length = 151202

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 176    gctgcttccccttgcacttc 195
              ||||||||||||||||||||
Sbjct: 102368 gctgcttccccttgcacttc 102387

>gb|AC101846.8| Mus musculus chromosome 5, clone RP23-258M22, complete sequence
          Length = 179892

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 243   ctcaaagcagacataattccagta 266
             ||||||||||||| ||||||||||
Sbjct: 68242 ctcaaagcagacaaaattccagta 68265

>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome
          Length = 3304561

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 144    ccatccaggactgcatggcgccgc 167
              ||||||||||||| ||||||||||
Sbjct: 834883 ccatccaggactggatggcgccgc 834860

>gb|CP000102.1| Methanosphaera stadtmanae DSM 3091, complete genome
          Length = 1767403

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 323    ttgcataagcatcagctgca 342
              ||||||||||||||||||||
Sbjct: 700491 ttgcataagcatcagctgca 700472

>emb|AL669976.11| Mouse DNA sequence from clone RP23-15J3 on chromosome X, complete
              sequence
          Length = 227762

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 244    tcaaagcagacataattcca 263
              ||||||||||||||||||||
Sbjct: 127415 tcaaagcagacataattcca 127434


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,030,044
Number of Sequences: 3902068
Number of extensions: 3030044
Number of successful extensions: 54376
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 54327
Number of HSP's gapped (non-prelim): 49
length of query: 342
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 320
effective length of database: 17,147,199,772
effective search space: 5487103927040
effective search space used: 5487103927040
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)