Clone Name | rbastl54e01 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | KGUA_ONYPE (P60554) Guanylate kinase (EC 2.7.4.8) (GMP kinase) | 28 | 5.5 | 2 | GLGB_VIBCH (Q9KNE8) 1,4-alpha-glucan branching enzyme (EC 2.4.1.... | 28 | 5.5 |
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>KGUA_ONYPE (P60554) Guanylate kinase (EC 2.7.4.8) (GMP kinase)| Length = 212 Score = 28.1 bits (61), Expect = 5.5 Identities = 13/31 (41%), Positives = 17/31 (54%) Frame = -1 Query: 173 LLGIFIGGDGVGSAAVTSVSFSLTDFNFILS 81 LL + G GVG A V F +T+ NF+ S Sbjct: 8 LLIVLSGPSGVGKATVRKALFEMTNHNFVYS 38
>GLGB_VIBCH (Q9KNE8) 1,4-alpha-glucan branching enzyme (EC 2.4.1.18) (Glycogen| branching enzyme) (BE) (1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase) Length = 666 Score = 28.1 bits (61), Expect = 5.5 Identities = 18/43 (41%), Positives = 20/43 (46%), Gaps = 10/43 (23%) Frame = -3 Query: 249 SKHYACCDLLVRSDETTSAISSE----------PPLARNFYWW 151 +K Y D V D +T AISSE PPLA FY W Sbjct: 621 AKQYNGSDYPVLQDVSTEAISSEGLDQSLLLSVPPLATLFYQW 663 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 42,405,831 Number of Sequences: 219361 Number of extensions: 639955 Number of successful extensions: 1155 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 1144 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1154 length of database: 80,573,946 effective HSP length: 97 effective length of database: 59,295,929 effective search space used: 1423102296 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)