ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl54d12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1TAAR6_MOUSE (Q5QD13) Trace amine-associated receptor 6 27 8.9

>TAAR6_MOUSE (Q5QD13) Trace amine-associated receptor 6|
          Length = 345

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
 Frame = -2

Query: 336 FSGSV----VFPSKFSNISQKGFELGGCKVEINVAWSLLIESQYDISVMGSIQPYAWESI 169
           +SG+V    V+      +S     +GGC+V +N  W L+    + I  +  I  Y    +
Sbjct: 163 YSGAVFYTGVYDDGLEELSSALNCVGGCQVVVNQNWVLIDFLSFLIPTLVMIILYGNIFL 222

Query: 168 PRRPVMKLVEDVGS 127
             R   K +E++GS
Sbjct: 223 VARQQAKKIENIGS 236


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 50,915,508
Number of Sequences: 219361
Number of extensions: 923474
Number of successful extensions: 1654
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1645
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1654
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 1359926328
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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