Clone Name | rbastl54d11 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | LEF5_GVCL (P41727) Late expression factor 5 homolog | 29 | 3.4 | 2 | KPC1B_CAEEL (P34885) Protein kinase C-like 1B (EC 2.7.11.13) (PK... | 28 | 5.8 | 3 | ABCG8_MOUSE (Q9DBM0) ATP-binding cassette sub-family G member 8 ... | 27 | 10.0 | 4 | UGGG_SCHPO (Q09140) UDP-glucose:glycoprotein glucosyltransferase... | 27 | 10.0 |
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>LEF5_GVCL (P41727) Late expression factor 5 homolog| Length = 240 Score = 28.9 bits (63), Expect = 3.4 Identities = 17/56 (30%), Positives = 31/56 (55%) Frame = +3 Query: 96 VRSQNIDSPPLFTPRRQLIQDAYLLHGSIRWVNSLSQTLTRL*AQTTKCTKSQYNM 263 ++++N DS P + + D+ L SI W NSL++ + + TTK ++ + NM Sbjct: 130 LKNKNFDSKPCKLKKEPI--DSILFKYSINWKNSLNKKRSLPKSTTTKKSEEKENM 183
>KPC1B_CAEEL (P34885) Protein kinase C-like 1B (EC 2.7.11.13) (PKC1B)| Length = 707 Score = 28.1 bits (61), Expect = 5.8 Identities = 14/49 (28%), Positives = 25/49 (51%) Frame = +1 Query: 10 FILLSYTHGTAIKFCSRQL**LSLRIANLYARKISTLLPFLHLDDNLYR 156 F ++ Y +G + F ++ A YA +++ L FLH +D +YR Sbjct: 453 FFVMEYVNGGDLMFQIQRARKFDESRARFYAAEVTCALQFLHRNDVIYR 501
>ABCG8_MOUSE (Q9DBM0) ATP-binding cassette sub-family G member 8 (Sterolin-2)| Length = 673 Score = 27.3 bits (59), Expect = 10.0 Identities = 9/26 (34%), Positives = 14/26 (53%) Frame = -1 Query: 205 WLSEFTHLMLPWRR*ASCISCRLGVK 128 W + +PWR +S SC LG++ Sbjct: 65 WFEQLAQFKIPWRSHSSQDSCELGIR 90
>UGGG_SCHPO (Q09140) UDP-glucose:glycoprotein glucosyltransferase precursor (EC| 2.4.1.-) (UDP--Glc:glycoprotein glucosyltransferase) (UGT) Length = 1448 Score = 27.3 bits (59), Expect = 10.0 Identities = 11/26 (42%), Positives = 17/26 (65%) Frame = -2 Query: 87 NPERELSELSRTKFYRCPVCITEEYE 10 NP++ LSEL T+FYR + E++ Sbjct: 929 NPKQTLSELPLTRFYRYSISAEPEFD 954 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 41,612,678 Number of Sequences: 219361 Number of extensions: 696880 Number of successful extensions: 1493 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 1485 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1493 length of database: 80,573,946 effective HSP length: 79 effective length of database: 63,244,427 effective search space used: 1517866248 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)