>CUS1_YEAST (Q02554) Protein CUS1|
          Length = 436

 Score = 29.3 bits (64), Expect = 2.8
 Identities = 12/44 (27%), Positives = 23/44 (52%)
 Frame = +1

Query: 19  INRLQNPTYFYILGHHHNTDNTSLPNYVGSYCSYQTTKYYNTPQ 150
           I  L+   Y  I+ +HH+       NY G+  S++T ++ N+ +
Sbjct: 337 ITNLKGDVYGKIIPNHHSRSKKQGRNYFGALISFETPEFENSKE 380

>HHAT_MOUSE (Q8BMT9) Protein-cysteine N-palmitoyltransferase HHAT (EC 2.3.1.-)|
           (Hedgehog acyltransferase) (Skinny hedgehog protein)
          Length = 499

 Score = 28.5 bits (62), Expect = 4.8
 Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 4/55 (7%)
 Frame = -1

Query: 205 WLPWGSNRVVYCSLMML*AEECCNIL*FGRNNKSRRNSVMMY----CLCYDGAPG 53
           W+ WG  R+V+  +  +   +   +L      K R   VM+Y    C C  GAPG
Sbjct: 63  WMEWGKRRLVWLFIGHMAVSQLATLL----TKKHRPWIVMVYGMWACWCVLGAPG 113

>YN53_CAEEL (P34587) Hypothetical protein ZC21.3|
          Length = 321

 Score = 28.5 bits (62), Expect = 4.8
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +1

Query: 67  HNTDNTSLPNYVGSYCSYQTTKYYNTP 147
           ++ D+ S  + V S C YQT + YNTP
Sbjct: 279 YSADSISCCSQVSSTCCYQTQQGYNTP 305

>TGB2_SHVX (Q04582) TGB2 protein (Triple gene block 2 protein) (TGBp2) (12 kDa|
           protein) (ORF 3 protein)
          Length = 103

 Score = 28.1 bits (61), Expect = 6.2
 Identities = 15/47 (31%), Positives = 22/47 (46%)
 Frame = +1

Query: 67  HNTDNTSLPNYVGSYCSYQTTKYYNTPQLRAS*ENNTRPYLNPMATT 207
           H  DNT    + G YC       Y+ P+  +S  NN  P++  +A T
Sbjct: 36  HVGDNTHNLPHGGQYCDGNKRVLYSGPKSGSSPTNNLWPFITVIALT 82

>MC6ZB_XENLA (Q7ZY18) Zygotic DNA replication licensing factor mcm6-B (Zygotic|
           minichromosome maintenance protein 6-B) (zMCM6-B)
           (zMCM6b)
          Length = 825

 Score = 28.1 bits (61), Expect = 6.2
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = +3

Query: 75  RQYIITELRRLLLFLPNYKILQHSSAQSIIREQYTTLFEPHGN 203
           R Y + E+RR LLF   +K      ++  I EQY  L +  G+
Sbjct: 566 RVYTLDEVRRYLLFARQFKPKISKESEDFIVEQYKRLRQRDGS 608

>VGL2_EBV (P03218) Probable membrane glycoprotein|
          Length = 248

 Score = 27.7 bits (60), Expect = 8.2
 Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 11/57 (19%)
 Frame = +2

Query: 68  ITQTIHHYRITSALIVPTKLQNITTLLSSEHHKRTI-----HDPI------*TPWQP 205
           +TQ +H   I +  I PT L + TT  S   H+R +     H P+        PW+P
Sbjct: 147 LTQRMHLTVIPATTIAPTTLVSHTTSTSHRPHRRPVSKRPTHKPVTLGPFPIDPWRP 203

>MCM6Z_XENTR (Q6P1V8) Zygotic DNA replication licensing factor mcm6 (Zygotic|
           minichromosome maintenance protein 6) (zMCM6)
          Length = 823

 Score = 27.7 bits (60), Expect = 8.2
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = +3

Query: 75  RQYIITELRRLLLFLPNYKILQHSSAQSIIREQYTTLFEPHG 200
           R Y + E+RR LLF   +K      ++  I EQY  L +  G
Sbjct: 566 RVYTLDEVRRYLLFARQFKPKISKESEDFIVEQYKRLRQRDG 607


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,738,977
Number of Sequences: 219361
Number of extensions: 756890
Number of successful extensions: 2056
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2019
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2054
length of database: 80,573,946
effective HSP length: 59
effective length of database: 67,631,647
effective search space used: 1623159528
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)