ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl54d07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_477026.1| Oryza sativa (japonica cultivar-group), mRNA 283 2e-73
2dbj|AK100095.1| Oryza sativa (japonica cultivar-group) cDNA clon... 283 2e-73
3gb|BT017026.1| Zea mays clone EK07D2312G12.c mRNA sequence 252 7e-64
4dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 210 3e-51
5dbj|AP005171.3| Oryza sativa (japonica cultivar-group) genomic D... 210 3e-51
6dbj|AP005259.3| Oryza sativa (japonica cultivar-group) genomic D... 210 3e-51
7ref|NM_187618.1| Oryza sativa (japonica cultivar-group), predic... 198 1e-47
8gb|BT017505.1| Zea mays clone EL01N0414H09.c mRNA sequence 198 1e-47
9dbj|AK068454.1| Oryza sativa (japonica cultivar-group) cDNA clon... 198 1e-47
10gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 107 3e-20
11gb|AC104473.2| Oryza sativa (japonica cultivar-group) chromosome... 107 3e-20
12dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 107 3e-20
13gb|AY111369.1| Zea mays CL858_1 mRNA sequence 64 4e-07
14gb|AY389774.1| Hyacinthus orientalis coatomer protein gamma subu... 62 1e-06
15dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
16dbj|AP004665.4| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
17dbj|AP004564.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
18gb|AE015924.1| Porphyromonas gingivalis W83, complete genome 42 1.3
19dbj|AP006864.1| Lotus japonicus genomic DNA, chromosome 3, clone... 42 1.3
20gb|AC129981.9| Mus musculus chromosome 5, clone RP23-114I13, com... 40 5.3
21gb|AY544051.1| Salmo salar clone Rsa473 microsatellite sequence 40 5.3
22gb|BC057901.1| Mus musculus RIKEN cDNA 4930504E06 gene, mRNA (cD... 40 5.3
23gb|BC051048.1| Mus musculus RIKEN cDNA 4930504E06 gene, mRNA (cD... 40 5.3
24gb|BC039762.1| Mus musculus RIKEN cDNA 4930504E06 gene, mRNA (cD... 40 5.3
25gb|AC116324.6| Mus musculus BAC clone RP23-282P1 from 16, comple... 40 5.3
26gb|BC019507.1| Mus musculus cDNA clone IMAGE:4221726, **** WARNI... 40 5.3
27gb|AC126722.7| Rattus norvegicus 4 BAC CH230-5L13 (Children's Ho... 40 5.3
28emb|BX321857.1| Nitrosomonas europaea ATCC 19718, complete genom... 40 5.3
29emb|BX294445.10| Zebrafish DNA sequence from clone DKEY-265K11 i... 40 5.3
30gb|AC099065.2| Homo sapiens chromosome 1 clone RP11-105I12, comp... 40 5.3
31dbj|AK169673.1| Mus musculus 2 days neonate thymus thymic cells ... 40 5.3
32gb|DQ067593.1| Cocksfoot streak virus isolate UK-1-04 GHCP619C H... 40 5.3
33gb|DQ067592.1| Cocksfoot streak virus isolate UK-1-04 GHCP619B H... 40 5.3
34gb|DQ067591.1| Cocksfoot streak virus isolate UK-1-04 GHCP619A H... 40 5.3
35dbj|AK087859.1| Mus musculus 2 days pregnant adult female ovary ... 40 5.3
36dbj|AK031002.1| Mus musculus adult male thymus cDNA, RIKEN full-... 40 5.3
37dbj|AK036838.1| Mus musculus adult female vagina cDNA, RIKEN ful... 40 5.3
38emb|AL929238.22| Mouse DNA sequence from clone RP23-480I16 on ch... 40 5.3
39gb|BC093521.1| Mus musculus RIKEN cDNA 4930504E06 gene, mRNA (cD... 40 5.3
40emb|BX248130.8| Zebrafish DNA sequence from clone CH211-236E5 in... 40 5.3
41gb|BC094388.1| Mus musculus RIKEN cDNA 4930504E06 gene, mRNA (cD... 40 5.3
42gb|AC068129.6| Homo sapiens BAC clone RP11-619F9 from 2, complet... 40 5.3
43ref|NM_133858.2| Mus musculus RIKEN cDNA 4930504E06 gene (493050... 40 5.3
44dbj|AK215644.1| Mus musculus cDNA, clone:Y2G0135L06, strand:plus... 40 5.3
45dbj|AK206919.1| Mus musculus cDNA, clone:Y2G0106F22, strand:plus... 40 5.3
46dbj|AK186674.1| Mus musculus cDNA, clone:Y0G0138E15, strand:plus... 40 5.3
47dbj|AK182185.1| Mus musculus cDNA, clone:Y0G0121C01, strand:plus... 40 5.3
48emb|BX005450.9| Zebrafish DNA sequence from clone CH211-150O23, ... 40 5.3
49emb|BX119907.8| Zebrafish DNA sequence from clone CH211-208D14 i... 40 5.3
50dbj|AB075603.1| Mus musculus ni mRNA for NF-E2 inducible protein... 40 5.3
51emb|CR854912.18| Zebrafish DNA sequence from clone DKEY-39O12 in... 40 5.3
52emb|BX914207.15| Zebrafish DNA sequence from clone DKEY-158P11 i... 40 5.3
53emb|CT025771.7| Zebrafish DNA sequence from clone DKEY-20I10 in ... 40 5.3
54gb|AC092202.28| Mus musculus strain C57BL/6J chromosome 3 clone ... 40 5.3
55emb|AL935150.10| Mouse DNA sequence from clone RP24-482A24 on ch... 40 5.3
56gb|AC140190.3| Mus musculus BAC clone RP24-372P19 from 3, comple... 40 5.3 
>ref|XM_477026.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3193

 Score =  283 bits (143), Expect = 2e-73
 Identities = 245/279 (87%)
 Strand = Plus / Minus

                                                                        
Query: 120  tttagccatttgcaacaatttcatggatcctgtcactgacctccggatcatctgatctga 179
            |||||||||||||||| |||||||||||| ||||||||| ||| ||||||||||||||||
Sbjct: 2900 tttagccatttgcaacgatttcatggatcttgtcactgatctcaggatcatctgatctga 2841

                                                                        
Query: 180  cagctagcttcatggccacttctttcggcccgctgattccaaatgatagtctcaccaaaa 239
            | |||||||||||||||||||| ||||| ||||| | ||| ||||| || ||||| ||||
Sbjct: 2840 ctgctagcttcatggccacttccttcggtccgctaagtccgaatgacagcctcactaaaa 2781

                                                                        
Query: 240  ctttcacattaccgatgaacacacctgaaagcaggcaagtgtgcgatctcgaattgtttt 299
            |||||||||| ||||| |||||||| || |||||||||||||| || ||||||||| || 
Sbjct: 2780 ctttcacattgccgataaacacaccagatagcaggcaagtgtgtgacctcgaattgcttg 2721

                                                                        
Query: 300  ggacaacatcggttccctcgcaaggctgcatgccaaggatgcttataacagcactcacag 359
            |||| ||||| ||||||||||| ||||||||||||||||||| ||| |||||||||||||
Sbjct: 2720 ggaccacatcagttccctcgcagggctgcatgccaaggatgcctatgacagcactcacag 2661

                                                   
Query: 360  cctcggccaagttctccctaacaccaagtccatactcat 398
            |||| |||| | | |||||  | ||||| ||||||||||
Sbjct: 2660 cctcagccaggctttccctggcgccaagcccatactcat 2622
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>dbj|AK100095.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023004B12, full
            insert sequence
          Length = 3193

 Score =  283 bits (143), Expect = 2e-73
 Identities = 245/279 (87%)
 Strand = Plus / Minus

                                                                        
Query: 120  tttagccatttgcaacaatttcatggatcctgtcactgacctccggatcatctgatctga 179
            |||||||||||||||| |||||||||||| ||||||||| ||| ||||||||||||||||
Sbjct: 2900 tttagccatttgcaacgatttcatggatcttgtcactgatctcaggatcatctgatctga 2841

                                                                        
Query: 180  cagctagcttcatggccacttctttcggcccgctgattccaaatgatagtctcaccaaaa 239
            | |||||||||||||||||||| ||||| ||||| | ||| ||||| || ||||| ||||
Sbjct: 2840 ctgctagcttcatggccacttccttcggtccgctaagtccgaatgacagcctcactaaaa 2781

                                                                        
Query: 240  ctttcacattaccgatgaacacacctgaaagcaggcaagtgtgcgatctcgaattgtttt 299
            |||||||||| ||||| |||||||| || |||||||||||||| || ||||||||| || 
Sbjct: 2780 ctttcacattgccgataaacacaccagatagcaggcaagtgtgtgacctcgaattgcttg 2721

                                                                        
Query: 300  ggacaacatcggttccctcgcaaggctgcatgccaaggatgcttataacagcactcacag 359
            |||| ||||| ||||||||||| ||||||||||||||||||| ||| |||||||||||||
Sbjct: 2720 ggaccacatcagttccctcgcagggctgcatgccaaggatgcctatgacagcactcacag 2661

                                                   
Query: 360  cctcggccaagttctccctaacaccaagtccatactcat 398
            |||| |||| | | |||||  | ||||| ||||||||||
Sbjct: 2660 cctcagccaggctttccctggcgccaagcccatactcat 2622
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>gb|BT017026.1| Zea mays clone EK07D2312G12.c mRNA sequence
          Length = 1125

 Score =  252 bits (127), Expect = 7e-64
 Identities = 241/279 (86%)
 Strand = Plus / Minus

                                                                       
Query: 118 gttttagccatttgcaacaatttcatggatcctgtcactgacctccggatcatctgatct 177
           |||||||||||| || |||||||| |||||||||||||||| ||| |||||||| |||||
Sbjct: 960 gttttagccattagcgacaatttcgtggatcctgtcactgatctctggatcatcagatct 901

                                                                       
Query: 178 gacagctagcttcatggccacttctttcggcccgctgattccaaatgatagtctcaccaa 237
            || || |||||||||||||| || |||||  | || ||||||||||| |||||||||||
Sbjct: 900 aactgccagcttcatggccacctccttcggtgcactaattccaaatgacagtctcaccaa 841

                                                                       
Query: 238 aactttcacattaccgatgaacacacctgaaagcaggcaagtgtgcgatctcgaattgtt 297
            |||||||| || || || |||||||| || ||||| ||||||||||| || |||||| |
Sbjct: 840 gactttcacgttgccaataaacacaccagagagcagacaagtgtgcgaccttgaattgct 781

                                                                       
Query: 298 ttggacaacatcggttccctcgcaaggctgcatgccaaggatgcttataacagcactcac 357
           | |||| || || |||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct: 780 tgggaccacgtcagttccctcacaaggctgcatgccaaggatgcttataacagcacttac 721

                                                  
Query: 358 agcctcggccaagttctccctaacaccaagtccatactc 396
           |||||| |||||| ||||||| || ||||| ||||||||
Sbjct: 720 agcctcagccaagctctcccttactccaagcccatactc 682
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score =  210 bits (106), Expect = 3e-51
 Identities = 175/198 (88%)
 Strand = Plus / Minus

                                                                           
Query: 120     tttagccatttgcaacaatttcatggatcctgtcactgacctccggatcatctgatctga 179
               |||||||||||||||| |||||||||||| ||||||||| ||| ||||||||||||||||
Sbjct: 5491408 tttagccatttgcaacgatttcatggatcttgtcactgatctcaggatcatctgatctga 5491349

                                                                           
Query: 180     cagctagcttcatggccacttctttcggcccgctgattccaaatgatagtctcaccaaaa 239
               | |||||||||||||||||||| ||||| ||||| | ||| ||||| || ||||| ||||
Sbjct: 5491348 ctgctagcttcatggccacttccttcggtccgctaagtccgaatgacagcctcactaaaa 5491289

                                                                           
Query: 240     ctttcacattaccgatgaacacacctgaaagcaggcaagtgtgcgatctcgaattgtttt 299
               |||||||||| ||||| |||||||| || |||||||||||||| || ||||||||| || 
Sbjct: 5491288 ctttcacattgccgataaacacaccagatagcaggcaagtgtgtgacctcgaattgcttg 5491229

                                 
Query: 300     ggacaacatcggttccct 317
               |||| ||||| |||||||
Sbjct: 5491228 ggaccacatcagttccct 5491211



 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 73/84 (86%)
 Strand = Plus / Minus

                                                                           
Query: 315     cctcgcaaggctgcatgccaaggatgcttataacagcactcacagcctcggccaagttct 374
               ||||||| ||||||||||||||||||| ||| ||||||||||||||||| |||| | | |
Sbjct: 5490995 cctcgcagggctgcatgccaaggatgcctatgacagcactcacagcctcagccaggcttt 5490936

                                       
Query: 375     ccctaacaccaagtccatactcat 398
               ||||  | ||||| ||||||||||
Sbjct: 5490935 ccctggcgccaagcccatactcat 5490912
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>dbj|AP005171.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
            clone:OSJNBa0081K20
          Length = 117287

 Score =  210 bits (106), Expect = 3e-51
 Identities = 175/198 (88%)
 Strand = Plus / Minus

                                                                        
Query: 120  tttagccatttgcaacaatttcatggatcctgtcactgacctccggatcatctgatctga 179
            |||||||||||||||| |||||||||||| ||||||||| ||| ||||||||||||||||
Sbjct: 4493 tttagccatttgcaacgatttcatggatcttgtcactgatctcaggatcatctgatctga 4434

                                                                        
Query: 180  cagctagcttcatggccacttctttcggcccgctgattccaaatgatagtctcaccaaaa 239
            | |||||||||||||||||||| ||||| ||||| | ||| ||||| || ||||| ||||
Sbjct: 4433 ctgctagcttcatggccacttccttcggtccgctaagtccgaatgacagcctcactaaaa 4374

                                                                        
Query: 240  ctttcacattaccgatgaacacacctgaaagcaggcaagtgtgcgatctcgaattgtttt 299
            |||||||||| ||||| |||||||| || |||||||||||||| || ||||||||| || 
Sbjct: 4373 ctttcacattgccgataaacacaccagatagcaggcaagtgtgtgacctcgaattgcttg 4314

                              
Query: 300  ggacaacatcggttccct 317
            |||| ||||| |||||||
Sbjct: 4313 ggaccacatcagttccct 4296



 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 73/84 (86%)
 Strand = Plus / Minus

                                                                        
Query: 315  cctcgcaaggctgcatgccaaggatgcttataacagcactcacagcctcggccaagttct 374
            ||||||| ||||||||||||||||||| ||| ||||||||||||||||| |||| | | |
Sbjct: 4080 cctcgcagggctgcatgccaaggatgcctatgacagcactcacagcctcagccaggcttt 4021

                                    
Query: 375  ccctaacaccaagtccatactcat 398
            ||||  | ||||| ||||||||||
Sbjct: 4020 ccctggcgccaagcccatactcat 3997
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>dbj|AP005259.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0519E02
          Length = 139321

 Score =  210 bits (106), Expect = 3e-51
 Identities = 175/198 (88%)
 Strand = Plus / Minus

                                                                          
Query: 120    tttagccatttgcaacaatttcatggatcctgtcactgacctccggatcatctgatctga 179
              |||||||||||||||| |||||||||||| ||||||||| ||| ||||||||||||||||
Sbjct: 125389 tttagccatttgcaacgatttcatggatcttgtcactgatctcaggatcatctgatctga 125330

                                                                          
Query: 180    cagctagcttcatggccacttctttcggcccgctgattccaaatgatagtctcaccaaaa 239
              | |||||||||||||||||||| ||||| ||||| | ||| ||||| || ||||| ||||
Sbjct: 125329 ctgctagcttcatggccacttccttcggtccgctaagtccgaatgacagcctcactaaaa 125270

                                                                          
Query: 240    ctttcacattaccgatgaacacacctgaaagcaggcaagtgtgcgatctcgaattgtttt 299
              |||||||||| ||||| |||||||| || |||||||||||||| || ||||||||| || 
Sbjct: 125269 ctttcacattgccgataaacacaccagatagcaggcaagtgtgtgacctcgaattgcttg 125210

                                
Query: 300    ggacaacatcggttccct 317
              |||| ||||| |||||||
Sbjct: 125209 ggaccacatcagttccct 125192



 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 73/84 (86%)
 Strand = Plus / Minus

                                                                          
Query: 315    cctcgcaaggctgcatgccaaggatgcttataacagcactcacagcctcggccaagttct 374
              ||||||| ||||||||||||||||||| ||| ||||||||||||||||| |||| | | |
Sbjct: 124976 cctcgcagggctgcatgccaaggatgcctatgacagcactcacagcctcagccaggcttt 124917

                                      
Query: 375    ccctaacaccaagtccatactcat 398
              ||||  | ||||| ||||||||||
Sbjct: 124916 ccctggcgccaagcccatactcat 124893
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>ref|NM_187618.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2481

 Score =  198 bits (100), Expect = 1e-47
 Identities = 226/268 (84%)
 Strand = Plus / Minus

                                                                        
Query: 131  gcaacaatttcatggatcctgtcactgacctccggatcatctgatctgacagctagcttc 190
            |||||||| || |||||| |||||||||| || ||||||||||| ||||| || ||||||
Sbjct: 2471 gcaacaatctcgtggatcttgtcactgacttcgggatcatctgacctgacggcaagcttc 2412

                                                                        
Query: 191  atggccacttctttcggcccgctgattccaaatgatagtctcaccaaaactttcacatta 250
            || |||||||| || |||||||| | |||||| ||||| || || | ||| ||  | |  
Sbjct: 2411 atcgccacttccttgggcccgctcagtccaaacgatagcctgacaagaaccttggcgtcg 2352

                                                                        
Query: 251  ccgatgaacacacctgaaagcaggcaagtgtgcgatctcgaattgttttggacaacatcg 310
            |||||||||||||| || |||||||||||||||||||| | ||| ||| | ||||| || 
Sbjct: 2351 ccgatgaacacaccagacagcaggcaagtgtgcgatcttgcattctttggtacaacctca 2292

                                                                        
Query: 311  gttccctcgcaaggctgcatgccaaggatgcttataacagcactcacagcctcggccaag 370
            || ||||| ||||||||||| |||||||| || || ||||||||||||||||| ||||||
Sbjct: 2291 gtgccctcacaaggctgcataccaaggatactaatgacagcactcacagcctcagccaag 2232

                                        
Query: 371  ttctccctaacaccaagtccatactcat 398
             |||| ||||||||||||||||||||||
Sbjct: 2231 ctctctctaacaccaagtccatactcat 2204
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>gb|BT017505.1| Zea mays clone EL01N0414H09.c mRNA sequence
          Length = 886

 Score =  198 bits (100), Expect = 1e-47
 Identities = 223/264 (84%)
 Strand = Plus / Minus

                                                                       
Query: 135 caatttcatggatcctgtcactgacctccggatcatctgatctgacagctagcttcatgg 194
           ||||||| |||||| ||||||||| ||| |||||||| ||||| || || || |||||||
Sbjct: 679 caatttcgtggatcttgtcactgagctctggatcatcagatctaactgccaggttcatgg 620

                                                                       
Query: 195 ccacttctttcggcccgctgattccaaatgatagtctcaccaaaactttcacattaccga 254
           |||| || |||||  | ||||||||||| || ||||||||||| |||||||| || || |
Sbjct: 619 ccacctccttcggggcactgattccaaaggaaagtctcaccaagactttcacgttgccaa 560

                                                                       
Query: 255 tgaacacacctgaaagcaggcaagtgtgcgatctcgaattgttttggacaacatcggttc 314
           | | ||| || || ||||| ||||||||||| || |||||| || |||| || || || |
Sbjct: 559 taaccaccccagagagcagacaagtgtgcgaccttgaattgcttgggaccacgtcagtcc 500

                                                                       
Query: 315 cctcgcaaggctgcatgccaaggatgcttataacagcactcacagcctcggccaagttct 374
           |||| ||||||||||||||||||||||||||||||||||| |||||||| |||||| |||
Sbjct: 499 cctcacaaggctgcatgccaaggatgcttataacagcacttacagcctcagccaagctct 440

                                   
Query: 375 ccctaacaccaagtccatactcat 398
           |||| || ||||| ||||||||||
Sbjct: 439 cccttactccaagcccatactcat 416
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>dbj|AK068454.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013155G01, full
            insert sequence
          Length = 3214

 Score =  198 bits (100), Expect = 1e-47
 Identities = 226/268 (84%)
 Strand = Plus / Minus

                                                                        
Query: 131  gcaacaatttcatggatcctgtcactgacctccggatcatctgatctgacagctagcttc 190
            |||||||| || |||||| |||||||||| || ||||||||||| ||||| || ||||||
Sbjct: 2825 gcaacaatctcgtggatcttgtcactgacttcgggatcatctgacctgacggcaagcttc 2766

                                                                        
Query: 191  atggccacttctttcggcccgctgattccaaatgatagtctcaccaaaactttcacatta 250
            || |||||||| || |||||||| | |||||| ||||| || || | ||| ||  | |  
Sbjct: 2765 atcgccacttccttgggcccgctcagtccaaacgatagcctgacaagaaccttggcgtcg 2706

                                                                        
Query: 251  ccgatgaacacacctgaaagcaggcaagtgtgcgatctcgaattgttttggacaacatcg 310
            |||||||||||||| || |||||||||||||||||||| | ||| ||| | ||||| || 
Sbjct: 2705 ccgatgaacacaccagacagcaggcaagtgtgcgatcttgcattctttggtacaacctca 2646

                                                                        
Query: 311  gttccctcgcaaggctgcatgccaaggatgcttataacagcactcacagcctcggccaag 370
            || ||||| ||||||||||| |||||||| || || ||||||||||||||||| ||||||
Sbjct: 2645 gtgccctcacaaggctgcataccaaggatactaatgacagcactcacagcctcagccaag 2586

                                        
Query: 371  ttctccctaacaccaagtccatactcat 398
             |||| ||||||||||||||||||||||
Sbjct: 2585 ctctctctaacaccaagtccatactcat 2558
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  107 bits (54), Expect = 3e-20
 Identities = 132/158 (83%)
 Strand = Plus / Minus

                                                                           
Query: 131     gcaacaatttcatggatcctgtcactgacctccggatcatctgatctgacagctagcttc 190
               |||||||| || |||||| |||||||||| || ||||||||||| ||||| || ||||||
Sbjct: 6651732 gcaacaatctcgtggatcttgtcactgacttcgggatcatctgacctgacggcaagcttc 6651673

                                                                           
Query: 191     atggccacttctttcggcccgctgattccaaatgatagtctcaccaaaactttcacatta 250
               || |||||||| || |||||||| | |||||| ||||| || || | ||| ||  | |  
Sbjct: 6651672 atcgccacttccttgggcccgctcagtccaaacgatagcctgacaagaaccttggcgtcg 6651613

                                                     
Query: 251     ccgatgaacacacctgaaagcaggcaagtgtgcgatct 288
               |||||||||||||| || ||||||||||||||||||||
Sbjct: 6651612 ccgatgaacacaccagacagcaggcaagtgtgcgatct 6651575



 Score =  103 bits (52), Expect = 4e-19
 Identities = 76/84 (90%)
 Strand = Plus / Minus

                                                                           
Query: 315     cctcgcaaggctgcatgccaaggatgcttataacagcactcacagcctcggccaagttct 374
               |||| ||||||||||| |||||||| || || ||||||||||||||||| |||||| |||
Sbjct: 6651423 cctcacaaggctgcataccaaggatactaatgacagcactcacagcctcagccaagctct 6651364

                                       
Query: 375     ccctaacaccaagtccatactcat 398
               | ||||||||||||||||||||||
Sbjct: 6651363 ctctaacaccaagtccatactcat 6651340
to top
>gb|AC104473.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1626B05,
             complete sequence
          Length = 127946

 Score =  107 bits (54), Expect = 3e-20
 Identities = 132/158 (83%)
 Strand = Plus / Minus

                                                                         
Query: 131   gcaacaatttcatggatcctgtcactgacctccggatcatctgatctgacagctagcttc 190
             |||||||| || |||||| |||||||||| || ||||||||||| ||||| || ||||||
Sbjct: 37280 gcaacaatctcgtggatcttgtcactgacttcgggatcatctgacctgacggcaagcttc 37221

                                                                         
Query: 191   atggccacttctttcggcccgctgattccaaatgatagtctcaccaaaactttcacatta 250
             || |||||||| || |||||||| | |||||| ||||| || || | ||| ||  | |  
Sbjct: 37220 atcgccacttccttgggcccgctcagtccaaacgatagcctgacaagaaccttggcgtcg 37161

                                                   
Query: 251   ccgatgaacacacctgaaagcaggcaagtgtgcgatct 288
             |||||||||||||| || ||||||||||||||||||||
Sbjct: 37160 ccgatgaacacaccagacagcaggcaagtgtgcgatct 37123



 Score =  103 bits (52), Expect = 4e-19
 Identities = 76/84 (90%)
 Strand = Plus / Minus

                                                                         
Query: 315   cctcgcaaggctgcatgccaaggatgcttataacagcactcacagcctcggccaagttct 374
             |||| ||||||||||| |||||||| || || ||||||||||||||||| |||||| |||
Sbjct: 36971 cctcacaaggctgcataccaaggatactaatgacagcactcacagcctcagccaagctct 36912

                                     
Query: 375   ccctaacaccaagtccatactcat 398
             | ||||||||||||||||||||||
Sbjct: 36911 ctctaacaccaagtccatactcat 36888
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  107 bits (54), Expect = 3e-20
 Identities = 132/158 (83%)
 Strand = Plus / Minus

                                                                           
Query: 131     gcaacaatttcatggatcctgtcactgacctccggatcatctgatctgacagctagcttc 190
               |||||||| || |||||| |||||||||| || ||||||||||| ||||| || ||||||
Sbjct: 6650945 gcaacaatctcgtggatcttgtcactgacttcgggatcatctgacctgacggcaagcttc 6650886

                                                                           
Query: 191     atggccacttctttcggcccgctgattccaaatgatagtctcaccaaaactttcacatta 250
               || |||||||| || |||||||| | |||||| ||||| || || | ||| ||  | |  
Sbjct: 6650885 atcgccacttccttgggcccgctcagtccaaacgatagcctgacaagaaccttggcgtcg 6650826

                                                     
Query: 251     ccgatgaacacacctgaaagcaggcaagtgtgcgatct 288
               |||||||||||||| || ||||||||||||||||||||
Sbjct: 6650825 ccgatgaacacaccagacagcaggcaagtgtgcgatct 6650788



 Score =  103 bits (52), Expect = 4e-19
 Identities = 76/84 (90%)
 Strand = Plus / Minus

                                                                           
Query: 315     cctcgcaaggctgcatgccaaggatgcttataacagcactcacagcctcggccaagttct 374
               |||| ||||||||||| |||||||| || || ||||||||||||||||| |||||| |||
Sbjct: 6650636 cctcacaaggctgcataccaaggatactaatgacagcactcacagcctcagccaagctct 6650577

                                       
Query: 375     ccctaacaccaagtccatactcat 398
               | ||||||||||||||||||||||
Sbjct: 6650576 ctctaacaccaagtccatactcat 6650553
to top
>gb|AY111369.1| Zea mays CL858_1 mRNA sequence
          Length = 1437

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 77/92 (83%)
 Strand = Plus / Minus

                                                                        
Query: 134  acaatttcatggatcctgtcactgacctccggatcatctgatctgacagctagcttcatg 193
            ||||| ||||| ||| | |||||||| || || ||||||||||| |||||||  ||||| 
Sbjct: 1194 acaatctcatgaatcttatcactgacttcagggtcatctgatctcacagctaatttcatt 1135

                                            
Query: 194  gccacttctttcggcccgctgattccaaatga 225
            |||||||| || |||||||| | |||||||||
Sbjct: 1134 gccacttcgttgggcccgctcagtccaaatga 1103



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 69/85 (81%)
 Strand = Plus / Minus

                                                                        
Query: 314  ccctcgcaaggctgcatgccaaggatgcttataacagcactcacagcctcggccaagttc 373
            ||||| || |||||||| ||||||||  | || |||||| | |||||||| |||||  | 
Sbjct: 1014 ccctcacacggctgcattccaaggatattaatgacagcattgacagcctcagccaaactt 955

                                     
Query: 374  tccctaacaccaagtccatactcat 398
            || ||||| || |||||||||||||
Sbjct: 954  tctctaaccccgagtccatactcat 930
to top
>gb|AY389774.1| Hyacinthus orientalis coatomer protein gamma subunit mRNA, partial
           cds
          Length = 871

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 37/39 (94%)
 Strand = Plus / Minus

                                                  
Query: 302 acaacatcggttccctcgcaaggctgcatgccaaggatg 340
           ||||| || ||||||||||||||||||||||||||||||
Sbjct: 736 acaacttcagttccctcgcaaggctgcatgccaaggatg 698
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 70       tggaaagccaaaacaacaaaa 90
                |||||||||||||||||||||
Sbjct: 21750132 tggaaagccaaaacaacaaaa 21750112
to top
>dbj|AP004665.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0429B05
          Length = 155024

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 70    tggaaagccaaaacaacaaaa 90
             |||||||||||||||||||||
Sbjct: 29715 tggaaagccaaaacaacaaaa 29695
to top
>dbj|AP004564.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0479C12
          Length = 136799

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 70     tggaaagccaaaacaacaaaa 90
              |||||||||||||||||||||
Sbjct: 117702 tggaaagccaaaacaacaaaa 117682
to top
>gb|AE015924.1| Porphyromonas gingivalis W83, complete genome
          Length = 2343476

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 354     tcacagcctcggccaagttct 374
               |||||||||||||||||||||
Sbjct: 1150569 tcacagcctcggccaagttct 1150589
to top
>dbj|AP006864.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT18I21, TM1144,
             complete sequence
          Length = 135217

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 79    aaaacaacaaaaaggtcaaccaaaa 103
             |||||||||||||||||||| ||||
Sbjct: 66692 aaaacaacaaaaaggtcaacaaaaa 66716
to top
>gb|AC129981.9| Mus musculus chromosome 5, clone RP23-114I13, complete sequence
          Length = 198469

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 219    caaatgatagtctcaccaaa 238
              ||||||||||||||||||||
Sbjct: 134144 caaatgatagtctcaccaaa 134163
to top
>gb|AY544051.1| Salmo salar clone Rsa473 microsatellite sequence
          Length = 1015

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 314 ccctcgcaaggctgcatgcc 333
           ||||||||||||||||||||
Sbjct: 252 ccctcgcaaggctgcatgcc 271
to top
>gb|BC057901.1| Mus musculus RIKEN cDNA 4930504E06 gene, mRNA (cDNA clone
           IMAGE:5028141), partial cds
          Length = 1361

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 346 aacagcactcacagcctcgg 365
           ||||||||||||||||||||
Sbjct: 282 aacagcactcacagcctcgg 263
to top
>gb|BC051048.1| Mus musculus RIKEN cDNA 4930504E06 gene, mRNA (cDNA clone
           IMAGE:4456314), partial cds
          Length = 1747

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 346 aacagcactcacagcctcgg 365
           ||||||||||||||||||||
Sbjct: 636 aacagcactcacagcctcgg 617
to top
>gb|BC039762.1| Mus musculus RIKEN cDNA 4930504E06 gene, mRNA (cDNA clone
           IMAGE:4010223), partial cds
          Length = 1671

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 346 aacagcactcacagcctcgg 365
           ||||||||||||||||||||
Sbjct: 571 aacagcactcacagcctcgg 552
to top
>gb|AC116324.6| Mus musculus BAC clone RP23-282P1 from 16, complete sequence
          Length = 200774

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 228    gtctcaccaaaactttcaca 247
              ||||||||||||||||||||
Sbjct: 141172 gtctcaccaaaactttcaca 141153
to top
>gb|BC019507.1| Mus musculus cDNA clone IMAGE:4221726, **** WARNING: chimeric clone
            ****
          Length = 2832

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 346  aacagcactcacagcctcgg 365
            ||||||||||||||||||||
Sbjct: 1737 aacagcactcacagcctcgg 1718
to top
>gb|AC126722.7| Rattus norvegicus 4 BAC CH230-5L13 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 217690

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 79    aaaacaacaaaaaggtcaac 98
             ||||||||||||||||||||
Sbjct: 30996 aaaacaacaaaaaggtcaac 31015
to top
>emb|BX321857.1| Nitrosomonas europaea ATCC 19718, complete genome; segment 2/10
          Length = 313050

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 74  aagccaaaacaacaaaaagg 93
           ||||||||||||||||||||
Sbjct: 565 aagccaaaacaacaaaaagg 584
to top
>emb|BX294445.10| Zebrafish DNA sequence from clone DKEY-265K11 in linkage group 1,
             complete sequence
          Length = 159780

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 258   acacacctgaaagcaggcaa 277
             ||||||||||||||||||||
Sbjct: 98857 acacacctgaaagcaggcaa 98876
to top
>gb|AC099065.2| Homo sapiens chromosome 1 clone RP11-105I12, complete sequence
          Length = 181253

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                  
Query: 69     atggaaagccaaaacaacaaaaaggtcaaccaaaaa 104
              ||||||||| |||| || |||||||||||| |||||
Sbjct: 156807 atggaaagcaaaaaaaaaaaaaaggtcaactaaaaa 156842
to top
>dbj|AK169673.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN
            full-length enriched library, clone:E430005P13
            product:NF-E2 inducible protein, full insert sequence
          Length = 2832

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 346  aacagcactcacagcctcgg 365
            ||||||||||||||||||||
Sbjct: 1753 aacagcactcacagcctcgg 1734
to top
>gb|DQ067593.1| Cocksfoot streak virus isolate UK-1-04 GHCP619C HC-Pro protein
            (HC-Pro) gene, partial cds
          Length = 1371

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 282  gcgatctcgaattgttttgg 301
            ||||||||||||||||||||
Sbjct: 1110 gcgatctcgaattgttttgg 1091
to top
>gb|DQ067592.1| Cocksfoot streak virus isolate UK-1-04 GHCP619B HC-Pro protein
            (HC-Pro) gene, partial cds
          Length = 1371

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 282  gcgatctcgaattgttttgg 301
            ||||||||||||||||||||
Sbjct: 1110 gcgatctcgaattgttttgg 1091
to top
>gb|DQ067591.1| Cocksfoot streak virus isolate UK-1-04 GHCP619A HC-Pro protein
            (HC-Pro) gene, partial cds
          Length = 1371

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 282  gcgatctcgaattgttttgg 301
            ||||||||||||||||||||
Sbjct: 1110 gcgatctcgaattgttttgg 1091
to top
>dbj|AK087859.1| Mus musculus 2 days pregnant adult female ovary cDNA, RIKEN
            full-length enriched library, clone:E330031O04
            product:hypothetical protein, full insert sequence
          Length = 2650

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 346  aacagcactcacagcctcgg 365
            ||||||||||||||||||||
Sbjct: 1566 aacagcactcacagcctcgg 1547
to top
>dbj|AK031002.1| Mus musculus adult male thymus cDNA, RIKEN full-length enriched
           library, clone:5830485N12 product:similar to Protein
           C20orf24 (Rab5-interacting protein) (RIP5) (PNAS-11)
           [Homo sapiens], full insert sequence
          Length = 2005

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 77  ccaaaacaacaaaaaggtca 96
           ||||||||||||||||||||
Sbjct: 906 ccaaaacaacaaaaaggtca 887
to top
>dbj|AK036838.1| Mus musculus adult female vagina cDNA, RIKEN full-length enriched
            library, clone:9930017F13 product:hypothetical protein,
            full insert sequence
          Length = 2796

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 346  aacagcactcacagcctcgg 365
            ||||||||||||||||||||
Sbjct: 1745 aacagcactcacagcctcgg 1726
to top
>emb|AL929238.22| Mouse DNA sequence from clone RP23-480I16 on chromosome 2, complete
             sequence
          Length = 174226

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 6     agaaaaccaacttacacata 25
             ||||||||||||||||||||
Sbjct: 14949 agaaaaccaacttacacata 14968
to top
>gb|BC093521.1| Mus musculus RIKEN cDNA 4930504E06 gene, mRNA (cDNA clone
           MGC:103304 IMAGE:4007022), complete cds
          Length = 1438

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 346 aacagcactcacagcctcgg 365
           ||||||||||||||||||||
Sbjct: 322 aacagcactcacagcctcgg 303
to top
>emb|BX248130.8| Zebrafish DNA sequence from clone CH211-236E5 in linkage group 1,
              complete sequence
          Length = 183058

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 258    acacacctgaaagcaggcaa 277
              ||||||||||||||||||||
Sbjct: 145464 acacacctgaaagcaggcaa 145483
to top
>gb|BC094388.1| Mus musculus RIKEN cDNA 4930504E06 gene, mRNA (cDNA clone MGC:106429
            IMAGE:5708548), complete cds
          Length = 2667

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 346  aacagcactcacagcctcgg 365
            ||||||||||||||||||||
Sbjct: 1570 aacagcactcacagcctcgg 1551
to top
>gb|AC068129.6| Homo sapiens BAC clone RP11-619F9 from 2, complete sequence
          Length = 150646

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 81    aacaacaaaaaggtcaacca 100
             ||||||||||||||||||||
Sbjct: 44400 aacaacaaaaaggtcaacca 44419
to top
>ref|NM_133858.2| Mus musculus RIKEN cDNA 4930504E06 gene (4930504E06Rik), mRNA
          Length = 2796

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 346  aacagcactcacagcctcgg 365
            ||||||||||||||||||||
Sbjct: 1745 aacagcactcacagcctcgg 1726
to top
>dbj|AK215644.1| Mus musculus cDNA, clone:Y2G0135L06, strand:plus,
           reference:ENSEMBL:Mouse-Transcript-
           ENST:ENSMUST00000039537, based on BLAT search
          Length = 318

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 346 aacagcactcacagcctcgg 365
           ||||||||||||||||||||
Sbjct: 20  aacagcactcacagcctcgg 1
to top
>dbj|AK206919.1| Mus musculus cDNA, clone:Y2G0106F22, strand:plus,
           reference:ENSEMBL:Mouse-Transcript-
           ENST:ENSMUST00000039537, based on BLAT search
          Length = 318

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 346 aacagcactcacagcctcgg 365
           ||||||||||||||||||||
Sbjct: 20  aacagcactcacagcctcgg 1
to top
>dbj|AK186674.1| Mus musculus cDNA, clone:Y0G0138E15, strand:plus,
           reference:ENSEMBL:Mouse-Transcript-
           ENST:ENSMUST00000039537, based on BLAT search
          Length = 134

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 346 aacagcactcacagcctcgg 365
           ||||||||||||||||||||
Sbjct: 20  aacagcactcacagcctcgg 1
to top
>dbj|AK182185.1| Mus musculus cDNA, clone:Y0G0121C01, strand:plus,
           reference:ENSEMBL:Mouse-Transcript-
           ENST:ENSMUST00000039537, based on BLAT search
          Length = 318

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 346 aacagcactcacagcctcgg 365
           ||||||||||||||||||||
Sbjct: 20  aacagcactcacagcctcgg 1
to top
>emb|BX005450.9| Zebrafish DNA sequence from clone CH211-150O23, complete sequence
          Length = 164218

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 36     ataattaatcgaaatccctt 55
              ||||||||||||||||||||
Sbjct: 160378 ataattaatcgaaatccctt 160359
to top
>emb|BX119907.8| Zebrafish DNA sequence from clone CH211-208D14 in linkage group 6,
             complete sequence
          Length = 181060

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 79    aaaacaacaaaaaggtcaac 98
             ||||||||||||||||||||
Sbjct: 24478 aaaacaacaaaaaggtcaac 24459
to top
>dbj|AB075603.1| Mus musculus ni mRNA for NF-E2 inducible protein, complete cds
          Length = 1412

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 346 aacagcactcacagcctcgg 365
           ||||||||||||||||||||
Sbjct: 764 aacagcactcacagcctcgg 745
to top
>emb|CR854912.18| Zebrafish DNA sequence from clone DKEY-39O12 in linkage group 6,
             complete sequence
          Length = 170067

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 79    aaaacaacaaaaaggtcaac 98
             ||||||||||||||||||||
Sbjct: 11246 aaaacaacaaaaaggtcaac 11265
to top
>emb|BX914207.15| Zebrafish DNA sequence from clone DKEY-158P11 in linkage group 4,
             complete sequence
          Length = 92140

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 344   ataacagcactcacagcctc 363
             ||||||||||||||||||||
Sbjct: 74498 ataacagcactcacagcctc 74517
to top
>emb|CT025771.7| Zebrafish DNA sequence from clone DKEY-20I10 in linkage group 13,
             complete sequence
          Length = 190607

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 344   ataacagcactcacagcctc 363
             ||||||||||||||||||||
Sbjct: 25665 ataacagcactcacagcctc 25684
to top
>gb|AC092202.28| Mus musculus strain C57BL/6J chromosome 3 clone rp23-407b16, complete
              sequence
          Length = 196249

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 346    aacagcactcacagcctcgg 365
              ||||||||||||||||||||
Sbjct: 158109 aacagcactcacagcctcgg 158128
to top
>emb|AL935150.10| Mouse DNA sequence from clone RP24-482A24 on chromosome 2, complete
             sequence
          Length = 163240

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 77    ccaaaacaacaaaaaggtca 96
             ||||||||||||||||||||
Sbjct: 91724 ccaaaacaacaaaaaggtca 91705
to top
>gb|AC140190.3| Mus musculus BAC clone RP24-372P19 from 3, complete sequence
          Length = 205702

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 346    aacagcactcacagcctcgg 365
              ||||||||||||||||||||
Sbjct: 179084 aacagcactcacagcctcgg 179065


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,992,467
Number of Sequences: 3902068
Number of extensions: 3992467
Number of successful extensions: 78040
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 77845
Number of HSP's gapped (non-prelim): 195
length of query: 398
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 376
effective length of database: 17,147,199,772
effective search space: 6447347114272
effective search space used: 6447347114272
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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