ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbastl54d06 |
|---|---|
| Clone Library Name | barley_pub |
>ACOX5_CANTR (P08790) Acyl-coenzyme A oxidase 5 (EC 1.3.3.6) (Acyl-CoA oxidase| 5) (PXP-5) Length = 661 Score = 29.6 bits (65), Expect = 1.8 Identities = 16/46 (34%), Positives = 27/46 (58%), Gaps = 3/46 (6%) Frame = +3 Query: 15 LSVYIQNQYTHQNQYTSFQINMFNPQVYTR--VNV*IVIQC-KGQG 143 LS Y +++Y Q + +F+PQV+TR VN+ + + C +G G Sbjct: 70 LSRYFEHEYPDQQAQRLSILGVFDPQVFTRIGVNLGLFVSCVRGNG 115
>GSA_SHEON (Q8EHC8) Glutamate-1-semialdehyde 2,1-aminomutase (EC 5.4.3.8)| (GSA) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT) Length = 430 Score = 28.1 bits (61), Expect = 5.4 Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 4/41 (9%) Frame = -2 Query: 356 TENQCFNFESEASH--CGPPTEEKLAGIRSLC--FGYLLLL 246 TE C E A + C PP L G+RSLC FG LL++ Sbjct: 196 TEISCIIIEPVAGNMNCIPPIPGFLEGLRSLCDEFGALLII 236
>NAC1_RAT (Q01728) Sodium/calcium exchanger 1 precursor| (Na(+)/Ca(2+)-exchange protein 1) Length = 971 Score = 27.7 bits (60), Expect = 7.0 Identities = 13/31 (41%), Positives = 17/31 (54%) Frame = -1 Query: 213 IFWSVDF*YIIYTLYYNGVVCIICPALYIVL 121 +FW V F ++ T Y+NG C I L I L Sbjct: 781 VFWKVLFAFVPPTEYWNGWACFIVSILMIGL 811
>NAC1_MOUSE (P70414) Sodium/calcium exchanger 1 precursor| (Na(+)/Ca(2+)-exchange protein 1) Length = 970 Score = 27.7 bits (60), Expect = 7.0 Identities = 13/31 (41%), Positives = 17/31 (54%) Frame = -1 Query: 213 IFWSVDF*YIIYTLYYNGVVCIICPALYIVL 121 +FW V F ++ T Y+NG C I L I L Sbjct: 780 VFWKVLFAFVPPTEYWNGWACFIVSILMIGL 810
>NAC1_CAVPO (P48766) Sodium/calcium exchanger 1 precursor| (Na(+)/Ca(2+)-exchange protein 1) Length = 970 Score = 27.7 bits (60), Expect = 7.0 Identities = 13/31 (41%), Positives = 17/31 (54%) Frame = -1 Query: 213 IFWSVDF*YIIYTLYYNGVVCIICPALYIVL 121 +FW V F ++ T Y+NG C I L I L Sbjct: 780 VFWKVLFAFVPPTEYWNGWACFIVSILMIGL 810
>NAC1_BOVIN (P48765) Sodium/calcium exchanger 1 precursor| (Na(+)/Ca(2+)-exchange protein 1) Length = 970 Score = 27.7 bits (60), Expect = 7.0 Identities = 13/31 (41%), Positives = 17/31 (54%) Frame = -1 Query: 213 IFWSVDF*YIIYTLYYNGVVCIICPALYIVL 121 +FW V F ++ T Y+NG C I L I L Sbjct: 780 VFWKVLFAFVPPTEYWNGWACFIVSILMIGL 810
>GSA_PHOLL (Q7N845) Glutamate-1-semialdehyde 2,1-aminomutase (EC 5.4.3.8)| (GSA) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT) Length = 427 Score = 27.7 bits (60), Expect = 7.0 Identities = 13/26 (50%), Positives = 18/26 (69%), Gaps = 2/26 (7%) Frame = -2 Query: 317 HCGPPTEEKLAGIRSLC--FGYLLLL 246 +C PP E L G+R+LC FG LL++ Sbjct: 211 NCVPPQPEFLPGLRALCDEFGALLII 236
>AURKB_HUMAN (Q96GD4) Serine/threonine-protein kinase 12 (EC 2.7.11.1) (Aurora-| and Ipl1-like midbody-associated protein 1) (AIM-1) (Aurora/IPL1-related kinase 2) (Aurora-related kinase 2) (STK-1) (Aurora-B) Length = 344 Score = 27.7 bits (60), Expect = 7.0 Identities = 23/86 (26%), Positives = 42/86 (48%), Gaps = 3/86 (3%) Frame = +3 Query: 96 YTRVNV*IVIQCKGQGRLYKQLHCNTMCRLCTRNQQ---TKKFNQYKSNCWPHQQK*IPK 266 Y R + ++++ +G LYK+L + CT ++Q T + + H +K I + Sbjct: 145 YDRRRIYLILEYAPRGELYKELQ-----KSCTFDEQRTATIMEELADALMYCHGKKVIHR 199 Query: 267 AQRPYSGKLLLRGWSAVAGFGFKVEA 344 +P + L L+G +A FG+ V A Sbjct: 200 DIKPENLLLGLKGELKIADFGWSVHA 225
>VPS53_CHICK (Q5ZLD7) Vacuolar protein sorting protein 53 homolog| Length = 831 Score = 27.7 bits (60), Expect = 7.0 Identities = 11/36 (30%), Positives = 19/36 (52%), Gaps = 1/36 (2%) Frame = +1 Query: 1 HAGHSSAYIYKISIHTKTSTPLFR-SICSIHKYIRE 105 H G S Y+ + +H K + P+ R ++ S KY + Sbjct: 629 HVGDQSPYVTSVILHIKQNVPIIRDNLASTRKYFTQ 664
>VPS53_MOUSE (Q8CCB4) Vacuolar protein sorting protein 53| Length = 832 Score = 27.7 bits (60), Expect = 7.0 Identities = 11/36 (30%), Positives = 19/36 (52%), Gaps = 1/36 (2%) Frame = +1 Query: 1 HAGHSSAYIYKISIHTKTSTPLFR-SICSIHKYIRE 105 H G S Y+ + +H K + P+ R ++ S KY + Sbjct: 630 HVGDQSPYVTSVILHIKQNVPIIRDNLASTRKYFTQ 665
>GSA_SHIFL (Q821C1) Glutamate-1-semialdehyde 2,1-aminomutase (EC 5.4.3.8)| (GSA) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT) Length = 426 Score = 27.7 bits (60), Expect = 7.0 Identities = 13/26 (50%), Positives = 18/26 (69%), Gaps = 2/26 (7%) Frame = -2 Query: 317 HCGPPTEEKLAGIRSLC--FGYLLLL 246 +C PP E L G+R+LC FG LL++ Sbjct: 211 NCVPPLPEFLPGLRALCDEFGALLII 236
>GSA_SALTY (P21267) Glutamate-1-semialdehyde 2,1-aminomutase (EC 5.4.3.8)| (GSA) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT) Length = 426 Score = 27.7 bits (60), Expect = 7.0 Identities = 13/26 (50%), Positives = 18/26 (69%), Gaps = 2/26 (7%) Frame = -2 Query: 317 HCGPPTEEKLAGIRSLC--FGYLLLL 246 +C PP E L G+R+LC FG LL++ Sbjct: 211 NCVPPLPEFLPGLRALCDEFGALLII 236
>GSA_SALTI (Q8Z9B4) Glutamate-1-semialdehyde 2,1-aminomutase (EC 5.4.3.8)| (GSA) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT) Length = 426 Score = 27.7 bits (60), Expect = 7.0 Identities = 13/26 (50%), Positives = 18/26 (69%), Gaps = 2/26 (7%) Frame = -2 Query: 317 HCGPPTEEKLAGIRSLC--FGYLLLL 246 +C PP E L G+R+LC FG LL++ Sbjct: 211 NCVPPLPEFLPGLRALCDEFGALLII 236
>GSA_SALPA (Q5PD43) Glutamate-1-semialdehyde 2,1-aminomutase (EC 5.4.3.8)| (GSA) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT) Length = 426 Score = 27.7 bits (60), Expect = 7.0 Identities = 13/26 (50%), Positives = 18/26 (69%), Gaps = 2/26 (7%) Frame = -2 Query: 317 HCGPPTEEKLAGIRSLC--FGYLLLL 246 +C PP E L G+R+LC FG LL++ Sbjct: 211 NCVPPLPEFLPGLRALCDEFGALLII 236
>GSA_ECOLI (P23893) Glutamate-1-semialdehyde 2,1-aminomutase (EC 5.4.3.8)| (GSA) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT) Length = 426 Score = 27.7 bits (60), Expect = 7.0 Identities = 13/26 (50%), Positives = 18/26 (69%), Gaps = 2/26 (7%) Frame = -2 Query: 317 HCGPPTEEKLAGIRSLC--FGYLLLL 246 +C PP E L G+R+LC FG LL++ Sbjct: 211 NCVPPLPEFLPGLRALCDEFGALLII 236
>GSA_ECOL6 (Q8FL16) Glutamate-1-semialdehyde 2,1-aminomutase (EC 5.4.3.8)| (GSA) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT) Length = 426 Score = 27.7 bits (60), Expect = 7.0 Identities = 13/26 (50%), Positives = 18/26 (69%), Gaps = 2/26 (7%) Frame = -2 Query: 317 HCGPPTEEKLAGIRSLC--FGYLLLL 246 +C PP E L G+R+LC FG LL++ Sbjct: 211 NCVPPLPEFLPGLRALCDEFGALLII 236
>NAC1_HUMAN (P32418) Sodium/calcium exchanger 1 precursor| (Na(+)/Ca(2+)-exchange protein 1) Length = 973 Score = 27.7 bits (60), Expect = 7.0 Identities = 13/31 (41%), Positives = 17/31 (54%) Frame = -1 Query: 213 IFWSVDF*YIIYTLYYNGVVCIICPALYIVL 121 +FW V F ++ T Y+NG C I L I L Sbjct: 783 VFWKVLFAFVPPTEYWNGWACFIVSILMIGL 813
>I17RD_MOUSE (Q8JZL1) Interleukin-17 receptor D precursor (IL-17 receptor D)| (IL-17RD) (Interleukin-17D receptor) (IL-17D receptor) (Interleukin-17 receptor-like protein) (Sef homolog) (mSef) Length = 738 Score = 27.7 bits (60), Expect = 7.0 Identities = 13/35 (37%), Positives = 21/35 (60%) Frame = +1 Query: 1 HAGHSSAYIYKISIHTKTSTPLFRSICSIHKYIRE 105 H GHSS Y +K+ L+ +IC++H++I E Sbjct: 522 HPGHSSRRNY---FRSKSGRSLYVAICNMHQFIDE 553
>ESM1_RAT (P97682) Endothelial cell-specific molecule 1 precursor (ESM-1| secretory protein) (ESM-1) (PG25) Length = 184 Score = 27.7 bits (60), Expect = 7.0 Identities = 9/19 (47%), Positives = 12/19 (63%) Frame = -3 Query: 181 LHIVLQWSCLYNLPCPLHC 125 LH+ + WS Y + CP HC Sbjct: 14 LHLGMAWSAKYAVDCPEHC 32
>ESM1_MOUSE (Q9QYY7) Endothelial cell-specific molecule 1 precursor (ESM-1| secretory protein) (ESM-1) Length = 184 Score = 27.7 bits (60), Expect = 7.0 Identities = 9/19 (47%), Positives = 12/19 (63%) Frame = -3 Query: 181 LHIVLQWSCLYNLPCPLHC 125 LH+ + WS Y + CP HC Sbjct: 14 LHLGMAWSAKYAVDCPEHC 32
>EF1G1_YEAST (P29547) Elongation factor 1-gamma 1 (EF-1-gamma 1) (Translation| elongation factor 1B gamma 1) (Eukaryotic elongation factor 1Bgamma 1) (eEF1Bgamma 1) (Calcium and membrane-binding protein 1) (Calcium phospholipid-binding protein) (CPBP) Length = 415 Score = 27.7 bits (60), Expect = 7.0 Identities = 24/87 (27%), Positives = 40/87 (45%), Gaps = 8/87 (9%) Frame = +1 Query: 130 VKGRADYTNNSI--VIQCVDYVLEI--NRPKN---LINTN-RIVGLINKSKYPKHNDLIP 285 +KG A Y S+ + VD +++I NR KN L N + L+ S + ++ Sbjct: 118 LKGGAPYNKKSVDSAMDAVDKIVDIFENRLKNYTYLATENISLADLVAASIFTRY----- 172 Query: 286 ASFSSVGGPQWLASDSKLKHWFSVEQA 366 F S+ G +W A + WF+ +A Sbjct: 173 --FESLFGTEWRAQHPAIVRWFNTVRA 197
>VPS53_PONPY (Q5R5J4) Vacuolar protein sorting protein 53| Length = 699 Score = 27.7 bits (60), Expect = 7.0 Identities = 11/36 (30%), Positives = 19/36 (52%), Gaps = 1/36 (2%) Frame = +1 Query: 1 HAGHSSAYIYKISIHTKTSTPLFR-SICSIHKYIRE 105 H G S Y+ + +H K + P+ R ++ S KY + Sbjct: 630 HVGDQSPYVTSVILHIKQNVPIIRDNLASTRKYFTQ 665
>VPS53_HUMAN (Q5VIR6) Vacuolar protein sorting protein 53| Length = 699 Score = 27.7 bits (60), Expect = 7.0 Identities = 11/36 (30%), Positives = 19/36 (52%), Gaps = 1/36 (2%) Frame = +1 Query: 1 HAGHSSAYIYKISIHTKTSTPLFR-SICSIHKYIRE 105 H G S Y+ + +H K + P+ R ++ S KY + Sbjct: 630 HVGDQSPYVTSVILHIKQNVPIIRDNLASTRKYFTQ 665
>NAC1_FELCA (P48767) Sodium/calcium exchanger 1 precursor| (Na(+)/Ca(2+)-exchange protein 1) Length = 970 Score = 27.3 bits (59), Expect = 9.1 Identities = 12/29 (41%), Positives = 16/29 (55%) Frame = -1 Query: 213 IFWSVDF*YIIYTLYYNGVVCIICPALYI 127 +FW V F ++ T Y+NG C I L I Sbjct: 780 VFWKVLFAFVPPTEYWNGWACFIVSILMI 808
>NAC1_CANFA (P23685) Sodium/calcium exchanger 1 precursor| (Na(+)/Ca(2+)-exchange protein 1) Length = 970 Score = 27.3 bits (59), Expect = 9.1 Identities = 12/29 (41%), Positives = 16/29 (55%) Frame = -1 Query: 213 IFWSVDF*YIIYTLYYNGVVCIICPALYI 127 +FW V F ++ T Y+NG C I L I Sbjct: 780 VFWKVLFAFVPPTEYWNGWACFIVSILMI 808
>GDN_MOUSE (Q07235) Glia-derived nexin precursor (GDN) (Protease nexin I)| (PN-1) (Serine protease-inhibitor 4) Length = 397 Score = 27.3 bits (59), Expect = 9.1 Identities = 10/29 (34%), Positives = 17/29 (58%) Frame = +2 Query: 224 QIELLASSTKVNTQSTTTLFRQASPPWVV 310 +IE+ TK + +T L ++SPPW + Sbjct: 343 KIEVSEDGTKASAATTAILIARSSPPWFI 371
>YRHK_BACSU (O05401) Hypothetical protein yrhK| Length = 96 Score = 27.3 bits (59), Expect = 9.1 Identities = 13/22 (59%), Positives = 15/22 (68%) Frame = -2 Query: 287 AGIRSLCFGYLLLLMRPTIRFV 222 AGI G LLLL+RPTIR + Sbjct: 54 AGIWLFAIGSLLLLIRPTIRLI 75
>IMB2_YEAST (P38217) Importin beta-2 subunit (Karyopherin beta-2 subunit)| (Importin 104) (Transportin) (TRN) Length = 918 Score = 27.3 bits (59), Expect = 9.1 Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 3/61 (4%) Frame = +1 Query: 13 SSAYIYKISIHTKTSTPLFRSICSIHKYIRELMCRL*YNVKGRADYT---NNSIVIQCVD 183 SSAY+ + I TST + S +IHK + L + NV + YT N+S I ++ Sbjct: 845 SSAYMGFLKIINLTSTEVTMSNDTIHKIVTGLSSNVEANVFAQEIYTFLMNHSAQISAIN 904 Query: 184 Y 186 + Sbjct: 905 F 905
>GIMA2_HUMAN (Q9UG22) GTPase, IMAP family member 2 (Immunity-associated protein| 2) (hIMAP2) Length = 337 Score = 27.3 bits (59), Expect = 9.1 Identities = 11/44 (25%), Positives = 25/44 (56%) Frame = -3 Query: 181 LHIVLQWSCLYNLPCPLHCITIYTLTLVYTCGLNILI*KEVYWF 50 L +++ W C+ + C L C ++++ ++ C L +I K++ F Sbjct: 281 LRLIILWLCILHSMCNLFCCLLFSMCNLF-CSLLFIIPKKLMIF 323
>GDN_HUMAN (P07093) Glia-derived nexin precursor (GDN) (Protease nexin I)| (PN-1) (Protease inhibitor 7) Length = 398 Score = 27.3 bits (59), Expect = 9.1 Identities = 10/29 (34%), Positives = 17/29 (58%) Frame = +2 Query: 224 QIELLASSTKVNTQSTTTLFRQASPPWVV 310 +IE+ TK + +T L ++SPPW + Sbjct: 344 KIEVSEDGTKASAATTAILIARSSPPWFI 372
>EDG3_HUMAN (Q99500) Sphingosine 1-phosphate receptor Edg-3 (S1P receptor| Edg-3) (Endothelial differentiation G-protein coupled receptor 3) (Sphingosine 1-phosphate receptor 3) (S1P3) Length = 378 Score = 27.3 bits (59), Expect = 9.1 Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 12/37 (32%) Frame = -3 Query: 172 VLQWSCLYNLP-----CPLH-------CITIYTLTLV 98 +L W+CL+NLP PL+ CI+I+T LV Sbjct: 173 ILGWNCLHNLPDCSTILPLYSKKYIAFCISIFTAILV 209
>GSA_YERPS (Q66EF1) Glutamate-1-semialdehyde 2,1-aminomutase (EC 5.4.3.8)| (GSA) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT) Length = 426 Score = 27.3 bits (59), Expect = 9.1 Identities = 13/26 (50%), Positives = 18/26 (69%), Gaps = 2/26 (7%) Frame = -2 Query: 317 HCGPPTEEKLAGIRSLC--FGYLLLL 246 +C PP E L G+R+LC FG LL++ Sbjct: 211 NCIPPLPEFLPGLRALCDEFGALLII 236
>GSA_YERPE (Q8ZBL9) Glutamate-1-semialdehyde 2,1-aminomutase (EC 5.4.3.8)| (GSA) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT) Length = 426 Score = 27.3 bits (59), Expect = 9.1 Identities = 13/26 (50%), Positives = 18/26 (69%), Gaps = 2/26 (7%) Frame = -2 Query: 317 HCGPPTEEKLAGIRSLC--FGYLLLL 246 +C PP E L G+R+LC FG LL++ Sbjct: 211 NCIPPLPEFLPGLRALCDEFGALLII 236
>DPM1_YEAST (P14020) Dolichol-phosphate mannosyltransferase (EC 2.4.1.83)| (Dolichol-phosphate mannose synthase) (Dolichyl-phosphate beta-D-mannosyltransferase) (Mannose-P-dolichol synthase) (MPD synthase) (DPM synthase) Length = 266 Score = 27.3 bits (59), Expect = 9.1 Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 8/55 (14%) Frame = -1 Query: 306 THGGEACRNKVVV--------LWVFTFVDEANNSICID*IFWSVDF*YIIYTLYY 166 T G KV++ L+VF F N++ + FWS+ F Y+ Y LY+ Sbjct: 212 TEGESKLSGKVIIQYLQQLKELYVFKF---GANNLILFITFWSILFFYVCYQLYH 263 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 56,753,267 Number of Sequences: 219361 Number of extensions: 1137069 Number of successful extensions: 3049 Number of sequences better than 10.0: 34 Number of HSP's better than 10.0 without gapping: 2989 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3049 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 1391514312 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
