Clone Name | rbastl54d05 |
---|---|
Clone Library Name | barley_pub |
>E137_ARATH (Q9M069) Putative glucan endo-1,3-beta-glucosidase 7 precursor (EC| 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) (Beta-1,3-glucanase) Length = 356 Score = 32.0 bits (71), Expect = 0.42 Identities = 18/54 (33%), Positives = 22/54 (40%) Frame = +2 Query: 122 FTQTNYSFFVYESDPGPINFRFCFFFA*LQPEERRMGQKKTQPRRLANDITHAA 283 F Y FF Y+SDP P FC F + + G K T D H+A Sbjct: 196 FAINPYPFFAYQSDPRPETLAFCLFEPNAGRVDSKTGIKYTNMFDAQVDAVHSA 249
>YM67_CAEEL (P34528) Putative serine protease K12H4.7 precursor (EC 3.4.-.-)| Length = 510 Score = 31.2 bits (69), Expect = 0.71 Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 2/67 (2%) Frame = +1 Query: 40 WALHITYRVVRHGSIHPSTNI*LPN--YIIYTNELQFLRLRVRPGTHQFPLLLLLRIVTT 213 W I +R +G HP++++ +PN Y+ ++ ++ T +FP L + VT Sbjct: 127 WVFDIEHRF--YGETHPTSDMSVPNLKYLSSAQAIEDAAAFIKAMTAKFPQLANAKWVTF 184 Query: 214 GGKEDGA 234 GG GA Sbjct: 185 GGSYSGA 191
>RAIA_SHIFL (P0AD52) Ribosome-associated inhibitor A| Length = 112 Score = 30.0 bits (66), Expect = 1.6 Identities = 14/28 (50%), Positives = 18/28 (64%) Frame = +3 Query: 48 TYNIQSRQARIHPSIHQHLATKLYHLHK 131 T NI S+Q I P+I QH+A +L L K Sbjct: 1 TMNITSKQMEITPAIRQHVADRLAKLEK 28
>RAIA_ECOLI (P0AD49) Ribosome-associated inhibitor A (Protein Y) (SpotY) (pY)| Length = 112 Score = 30.0 bits (66), Expect = 1.6 Identities = 14/28 (50%), Positives = 18/28 (64%) Frame = +3 Query: 48 TYNIQSRQARIHPSIHQHLATKLYHLHK 131 T NI S+Q I P+I QH+A +L L K Sbjct: 1 TMNITSKQMEITPAIRQHVADRLAKLEK 28
>RAIA_ECOL6 (P0AD50) Ribosome-associated inhibitor A| Length = 112 Score = 30.0 bits (66), Expect = 1.6 Identities = 14/28 (50%), Positives = 18/28 (64%) Frame = +3 Query: 48 TYNIQSRQARIHPSIHQHLATKLYHLHK 131 T NI S+Q I P+I QH+A +L L K Sbjct: 1 TMNITSKQMEITPAIRQHVADRLAKLEK 28
>RAIA_ECO57 (P0AD51) Ribosome-associated inhibitor A| Length = 112 Score = 30.0 bits (66), Expect = 1.6 Identities = 14/28 (50%), Positives = 18/28 (64%) Frame = +3 Query: 48 TYNIQSRQARIHPSIHQHLATKLYHLHK 131 T NI S+Q I P+I QH+A +L L K Sbjct: 1 TMNITSKQMEITPAIRQHVADRLAKLEK 28
>TOLB_DESVH (Q726K4) Protein tolB precursor| Length = 456 Score = 27.7 bits (60), Expect = 7.9 Identities = 16/52 (30%), Positives = 23/52 (44%) Frame = +2 Query: 2 DLTIPNLFSLSKHGHYI*HTESSGTDPSIHPPTSSYQTISFTQTNYSFFVYE 157 D+T + +SK G Y T+PSI P + T T + FVY+ Sbjct: 342 DMTTGQVTRISKTGSY-------NTEPSISPDGTLVAFTKMTDTGHRIFVYD 386 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 42,296,304 Number of Sequences: 219361 Number of extensions: 782284 Number of successful extensions: 1719 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 1698 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1719 length of database: 80,573,946 effective HSP length: 70 effective length of database: 65,218,676 effective search space used: 1565248224 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)