ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbastl54d02 |
|---|---|
| Clone Library Name | barley_pub |
>IDE_HUMAN (P14735) Insulin-degrading enzyme (EC 3.4.24.56) (Insulysin)| (Insulinase) (Insulin protease) Length = 1018 Score = 35.4 bits (80), Expect = 0.033 Identities = 15/47 (31%), Positives = 25/47 (53%) Frame = -1 Query: 399 FDMAKLEAEELRTVGKEDVISWYNTYIRSSSPTRRRLAIHVYGCNSD 259 FD E L+T+ KED+I +Y + +P R ++++HV D Sbjct: 917 FDRDNTEVAYLKTLTKEDIIKFYKEMLAVDAPRRHKVSVHVLAREMD 963
>IDE_RAT (P35559) Insulin-degrading enzyme (EC 3.4.24.56) (Insulysin)| (Insulinase) (Insulin protease) Length = 1019 Score = 35.0 bits (79), Expect = 0.043 Identities = 13/47 (27%), Positives = 26/47 (55%) Frame = -1 Query: 399 FDMAKLEAEELRTVGKEDVISWYNTYIRSSSPTRRRLAIHVYGCNSD 259 +D +E L+T+ K+D+I +Y + +P R ++++HV D Sbjct: 918 YDRDNIEVAYLKTLSKDDIIKFYKEMLAVDAPRRHKVSVHVLAREMD 964
>IDE_MOUSE (Q9JHR7) Insulin-degrading enzyme (EC 3.4.24.56) (Insulysin)| (Insulinase) (Insulin protease) Length = 1019 Score = 33.9 bits (76), Expect = 0.095 Identities = 13/47 (27%), Positives = 26/47 (55%) Frame = -1 Query: 399 FDMAKLEAEELRTVGKEDVISWYNTYIRSSSPTRRRLAIHVYGCNSD 259 +D +E L+T+ K+D+I +Y + +P R ++++HV D Sbjct: 918 YDRDNIEVAYLKTLTKDDIIRFYQEMLAVDAPRRHKVSVHVLAREMD 964
>S6A18_HUMAN (Q96N87) Sodium- and chloride-dependent transporter XTRP2 (Solute| carrier family 6 member 18) Length = 628 Score = 32.7 bits (73), Expect = 0.21 Identities = 16/66 (24%), Positives = 30/66 (45%), Gaps = 6/66 (9%) Frame = -2 Query: 188 RPNFIQTSAEGSWILFVWYN------AYIGSLPKLRWLFIICVAAVWTSLTIVDIKQLST 27 R F++ S + + WY A I ++W +IC+AA W + + I+ + T Sbjct: 145 RTGFVEECQGSSAVSYFWYRQTLNITADINDSGSIQWWLLICLAASWAVVYMCVIRGIET 204 Query: 26 ENHVVW 9 V++ Sbjct: 205 TGKVIY 210
>NRDC_RAT (P47245) Nardilysin precursor (EC 3.4.24.61) (N-arginine dibasic| convertase) (NRD convertase) (NRD-C) Length = 1161 Score = 32.3 bits (72), Expect = 0.28 Identities = 14/44 (31%), Positives = 24/44 (54%) Frame = -1 Query: 402 MFDMAKLEAEELRTVGKEDVISWYNTYIRSSSPTRRRLAIHVYG 271 +FD E E L++ K D++SW+ + P + L++HV G Sbjct: 1060 LFDRLAHEIEALKSFSKSDLVSWFKAH---RGPGSKMLSVHVVG 1100
>NRDC_MOUSE (Q8BHG1) Nardilysin precursor (EC 3.4.24.61) (N-arginine dibasic| convertase) (NRD convertase) (NRD-C) Length = 1161 Score = 32.3 bits (72), Expect = 0.28 Identities = 14/44 (31%), Positives = 24/44 (54%) Frame = -1 Query: 402 MFDMAKLEAEELRTVGKEDVISWYNTYIRSSSPTRRRLAIHVYG 271 +FD E E L++ K D++SW+ + P + L++HV G Sbjct: 1060 LFDRLAHEIEALKSFSKSDLVSWFKAH---RGPGSKMLSVHVVG 1100
>S6A19_PONPY (Q5R6J1) Sodium-dependent neutral amino acid transporter B(0)| (System B(0) neutral amino acid transporter) (B(0)AT1) (Solute carrier family 6 member 19) Length = 634 Score = 32.0 bits (71), Expect = 0.36 Identities = 14/64 (21%), Positives = 30/64 (46%), Gaps = 6/64 (9%) Frame = -2 Query: 179 FIQTSAEGSWILFVWY------NAYIGSLPKLRWLFIICVAAVWTSLTIVDIKQLSTENH 18 ++ A S + + WY + I ++W ++C+A W+ L + I+ + T Sbjct: 162 YVDECARSSPVDYFWYRETLNISTSISDSGSIQWRMLLCLACAWSVLYMCTIRGIETTGK 221 Query: 17 VVWL 6 VV++ Sbjct: 222 VVYI 225
>S6A18_RAT (Q62687) Sodium- and chloride-dependent transporter XTRP2 (Solute| carrier family 6 member 18) (Renal osmotic stress-induced Na-Cl organic solute cotransporter) (ROSIT) Length = 615 Score = 32.0 bits (71), Expect = 0.36 Identities = 13/66 (19%), Positives = 30/66 (45%), Gaps = 6/66 (9%) Frame = -2 Query: 188 RPNFIQTSAEGSWILFVWYN------AYIGSLPKLRWLFIICVAAVWTSLTIVDIKQLST 27 R F+Q + + WY + I + ++W +C+ A WT++ + I+ + + Sbjct: 144 RTGFVQECQSSGTVSYFWYRQTLNITSDISNTGTIQWKLFLCLVACWTTVYLCVIRGIES 203 Query: 26 ENHVVW 9 V++ Sbjct: 204 TGKVIY 209
>NRDC_HUMAN (O43847) Nardilysin precursor (EC 3.4.24.61) (N-arginine dibasic| convertase) (NRD convertase) (NRD-C) Length = 1150 Score = 31.2 bits (69), Expect = 0.62 Identities = 13/44 (29%), Positives = 24/44 (54%) Frame = -1 Query: 402 MFDMAKLEAEELRTVGKEDVISWYNTYIRSSSPTRRRLAIHVYG 271 +FD E E L++ K D+++W+ + P + L++HV G Sbjct: 1048 LFDRLAHEIEALKSFSKSDLVNWFKAH---RGPGSKMLSVHVVG 1088
>NRDC_PONPY (Q5R4H6) Nardilysin precursor (EC 3.4.24.61) (N-arginine dibasic| convertase) (NRD convertase) (NRD-C) Length = 1152 Score = 31.2 bits (69), Expect = 0.62 Identities = 13/44 (29%), Positives = 24/44 (54%) Frame = -1 Query: 402 MFDMAKLEAEELRTVGKEDVISWYNTYIRSSSPTRRRLAIHVYG 271 +FD E E L++ K D+++W+ + P + L++HV G Sbjct: 1050 LFDRLAHEIEALKSFSKSDLVNWFKAH---RGPGSKMLSVHVVG 1090
>S6A19_MOUSE (Q9D687) Sodium-dependent neutral amino acid transporter B(0)| (System B(0) neutral amino acid transporter) (B(0)AT1) (Solute carrier family 6 member 19) Length = 634 Score = 30.4 bits (67), Expect = 1.1 Identities = 12/64 (18%), Positives = 30/64 (46%), Gaps = 6/64 (9%) Frame = -2 Query: 179 FIQTSAEGSWILFVWY------NAYIGSLPKLRWLFIICVAAVWTSLTIVDIKQLSTENH 18 +++ A+ S + + WY + I ++W ++C+ W+ L + I+ + T Sbjct: 162 YVEECAKSSSVDYFWYRETLNISTSISDSGSIQWWILLCLTCAWSVLYVCIIRGIETTGK 221 Query: 17 VVWL 6 V++ Sbjct: 222 AVYI 225
>S6A19_HUMAN (Q695T7) Sodium-dependent neutral amino acid transporter B(0)| (System B(0) neutral amino acid transporter) (B(0)AT1) (Solute carrier family 6 member 19) Length = 634 Score = 30.4 bits (67), Expect = 1.1 Identities = 13/64 (20%), Positives = 29/64 (45%), Gaps = 6/64 (9%) Frame = -2 Query: 179 FIQTSAEGSWILFVWY------NAYIGSLPKLRWLFIICVAAVWTSLTIVDIKQLSTENH 18 ++ A S + + WY + I ++W ++C+A W+ L + I+ + T Sbjct: 162 YVDECARSSPVDYFWYRETLNISTSISDSGSIQWWMLLCLACAWSVLYMCTIRGIETTGK 221 Query: 17 VVWL 6 V++ Sbjct: 222 AVYI 225
>S6A18_MOUSE (O88576) Sodium- and chloride-dependent transporter XTRP2 (Solute| carrier family 6 member 18) Length = 615 Score = 30.4 bits (67), Expect = 1.1 Identities = 12/66 (18%), Positives = 30/66 (45%), Gaps = 6/66 (9%) Frame = -2 Query: 188 RPNFIQTSAEGSWILFVWYN------AYIGSLPKLRWLFIICVAAVWTSLTIVDIKQLST 27 R F+Q + + WY + I + ++W +C+ A W+++ + I+ + + Sbjct: 144 RTGFVQECQSSGTVSYFWYRQTLNITSDISNTGTIQWKLFLCLVACWSTVYLCVIRGIES 203 Query: 26 ENHVVW 9 V++ Sbjct: 204 TGKVIY 209
>ADR1_MOUSE (Q91VH1) Adiponectin receptor protein 1| Length = 375 Score = 29.3 bits (64), Expect = 2.3 Identities = 12/47 (25%), Positives = 28/47 (59%) Frame = -2 Query: 158 GSWILFVWYNAYIGSLPKLRWLFIICVAAVWTSLTIVDIKQLSTENH 18 GS++ +++Y+ Y P+L +L I+CV + +++ + + +T H Sbjct: 218 GSFVPWLYYSFYCSPQPRLIYLSIVCVLGI-SAIIVAQWDRFATPKH 263
>ADR1_HUMAN (Q96A54) Adiponectin receptor protein 1 (Progestin and adipoQ| receptor family member I) Length = 375 Score = 29.3 bits (64), Expect = 2.3 Identities = 12/47 (25%), Positives = 28/47 (59%) Frame = -2 Query: 158 GSWILFVWYNAYIGSLPKLRWLFIICVAAVWTSLTIVDIKQLSTENH 18 GS++ +++Y+ Y P+L +L I+CV + +++ + + +T H Sbjct: 218 GSFVPWLYYSFYCSPQPRLIYLSIVCVLGI-SAIIVAQWDRFATPKH 263
>REC12_SCHPO (P40384) Meiotic recombination protein rec12| Length = 345 Score = 28.9 bits (63), Expect = 3.1 Identities = 12/30 (40%), Positives = 17/30 (56%) Frame = +3 Query: 156 SLSRGLDKIGTKPSRIQHHQLQSMTALAAW 245 +L G TKP I HH++ S+T+ A W Sbjct: 145 ALENGTVITATKPLLISHHRISSITSTAKW 174
>ATX2_HUMAN (Q99700) Ataxin-2 (Spinocerebellar ataxia type 2 protein)| (Trinucleotide repeat-containing gene 13 protein) Length = 1312 Score = 28.9 bits (63), Expect = 3.1 Identities = 13/28 (46%), Positives = 16/28 (57%) Frame = +3 Query: 192 PSRIQHHQLQSMTALAAWQPQQYQSCNH 275 PS +QHHQ Q+ AL PQQ + H Sbjct: 1167 PSPVQHHQHQAAQALHLASPQQQSAIYH 1194
>ATX2_MOUSE (O70305) Ataxin-2 (Spinocerebellar ataxia type 2 protein homolog)| Length = 1285 Score = 28.9 bits (63), Expect = 3.1 Identities = 13/28 (46%), Positives = 16/28 (57%) Frame = +3 Query: 192 PSRIQHHQLQSMTALAAWQPQQYQSCNH 275 PS +QHHQ Q+ AL PQQ + H Sbjct: 1141 PSPVQHHQHQAAQALHLASPQQQSAIYH 1168
>DUS_AZOBR (P45672) Probable tRNA-dihydrouridine synthase (EC 1.-.-.-)| Length = 328 Score = 28.9 bits (63), Expect = 3.1 Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%) Frame = -1 Query: 306 PTRRRLAIHVYGCNSDI-AEAAKLQEQSWTAIDDV 205 P + +A+ + GC D+ AEAAKL E AI D+ Sbjct: 64 PEQFPMAVQLAGCEPDVMAEAAKLNEDRGAAIIDI 98
>SERC_MYCTU (P63514) Putative phosphoserine aminotransferase (EC 2.6.1.52)| (PSAT) Length = 376 Score = 28.9 bits (63), Expect = 3.1 Identities = 12/38 (31%), Positives = 24/38 (63%) Frame = +3 Query: 129 IVPNKQDPTSLSRGLDKIGTKPSRIQHHQLQSMTALAA 242 + P+ + PT++ + G+ PS+++ QLQ++T AA Sbjct: 5 LTPHLEIPTAIKPRDGRFGSGPSKVRLEQLQTLTTTAA 42
>SERC_MYCBO (P63515) Putative phosphoserine aminotransferase (EC 2.6.1.52)| (PSAT) Length = 376 Score = 28.9 bits (63), Expect = 3.1 Identities = 12/38 (31%), Positives = 24/38 (63%) Frame = +3 Query: 129 IVPNKQDPTSLSRGLDKIGTKPSRIQHHQLQSMTALAA 242 + P+ + PT++ + G+ PS+++ QLQ++T AA Sbjct: 5 LTPHLEIPTAIKPRDGRFGSGPSKVRLEQLQTLTTTAA 42
>YEEF_ECOLI (P0AA47) Inner membrane transport protein yeeF| Length = 452 Score = 28.5 bits (62), Expect = 4.0 Identities = 10/43 (23%), Positives = 25/43 (58%) Frame = -2 Query: 140 VWYNAYIGSLPKLRWLFIICVAAVWTSLTIVDIKQLSTENHVV 12 +++ A + S+P W+F++ + A T+ + +K ++ N V+ Sbjct: 119 IYFEALVPSIPS--WMFVVALVAFMTAFNLRSLKSVANFNTVI 159
>YEEF_ECO57 (P0AA48) Inner membrane transport protein yeeF| Length = 452 Score = 28.5 bits (62), Expect = 4.0 Identities = 10/43 (23%), Positives = 25/43 (58%) Frame = -2 Query: 140 VWYNAYIGSLPKLRWLFIICVAAVWTSLTIVDIKQLSTENHVV 12 +++ A + S+P W+F++ + A T+ + +K ++ N V+ Sbjct: 119 IYFEALVPSIPS--WMFVVALVAFMTAFNLRSLKSVANFNTVI 159
>PEPT_GEOKA (Q5KZ39) Peptidase T (EC 3.4.11.4) (Tripeptide aminopeptidase)| (Aminotripeptidase) (Tripeptidase) Length = 411 Score = 28.5 bits (62), Expect = 4.0 Identities = 13/43 (30%), Positives = 24/43 (55%) Frame = -1 Query: 399 FDMAKLEAEELRTVGKEDVISWYNTYIRSSSPTRRRLAIHVYG 271 +++A++ EEL+ +G EDV N Y+ ++ P + V G Sbjct: 33 WELARMLVEELKAIGMEDVTIDDNGYVMATLPANTDKNVPVIG 75
>VWF_CANFA (Q28295) Von Willebrand factor precursor (vWF)| Length = 2813 Score = 28.1 bits (61), Expect = 5.2 Identities = 13/39 (33%), Positives = 23/39 (58%) Frame = -2 Query: 293 DWQSMCMVATLILLRLPSCKSSHGLQLMMLNP*RFRPNF 177 +++ +C + + L +P C+ GLQ+ + NP RPNF Sbjct: 2322 EYECVCDLVSCDLPPVPPCED--GLQMTLTNPGECRPNF 2358
>TYSY_BIFLO (Q8G3T9) Thymidylate synthase (EC 2.1.1.45) (TS) (TSase)| Length = 266 Score = 28.1 bits (61), Expect = 5.2 Identities = 17/66 (25%), Positives = 30/66 (45%), Gaps = 2/66 (3%) Frame = +3 Query: 135 PNKQDPTSLSRGLDKIGTKPSRIQHHQLQSMTALAAWQPQQYQ--SCNHTHGLPIVYVLE 308 P +DP +R +D+I I+HH ++AW P + + + H L YV + Sbjct: 103 PTPEDP---NRTIDQISNVLDLIKHHPDSRRMIVSAWNPAEVEKMALPPCHALFQFYVAD 159 Query: 309 KMILCR 326 + C+ Sbjct: 160 DKLSCQ 165
>Y1311_METJA (Q58707) Hypothetical protein MJ1311| Length = 293 Score = 28.1 bits (61), Expect = 5.2 Identities = 15/48 (31%), Positives = 27/48 (56%) Frame = -1 Query: 375 EELRTVGKEDVISWYNTYIRSSSPTRRRLAIHVYGCNSDIAEAAKLQE 232 E+L+ +G + VIS N IR + ++ L ++ N +AE K++E Sbjct: 246 EKLKEIGYDGVISIENKNIRDAVKSKEILKEYLEIVNEKVAEKEKIEE 293
>ATC5_YEAST (P32660) Probable phospholipid-transporting ATPase DNF1 (EC| 3.6.3.1) Length = 1571 Score = 28.1 bits (61), Expect = 5.2 Identities = 17/57 (29%), Positives = 29/57 (50%) Frame = -1 Query: 342 ISWYNTYIRSSSPTRRRLAIHVYGCNSDIAEAAKLQEQSWTAIDDVESLKVSSQFYP 172 +S+ Y + + R+R I V E A++ + T ID++ +L +SQFYP Sbjct: 687 VSYGRAYTEALAGLRKRQGIDVE--TEGRREKAEIAKDRDTMIDELRALSGNSQFYP 741
>THF1_SYNSC (Q3AJN7) Protein thf1| Length = 215 Score = 27.7 bits (60), Expect = 6.8 Identities = 21/71 (29%), Positives = 40/71 (56%), Gaps = 5/71 (7%) Frame = -1 Query: 390 AKLEAEELRTVGKEDVISWYNTYIRSSSPTRRRLAIHVYGCNSDIAEAAKLQEQSWTAID 211 ++ EA EL +VG + + ++T+I+ P + A+ C+S+ +AAKL++ + ++ Sbjct: 44 SRFEANELFSVG---LCTVFDTFIKGYRPEAQTDALFRALCSSNGFDAAKLRKTYASLVE 100 Query: 210 -----DVESLK 193 D ESLK Sbjct: 101 QAKGKDPESLK 111
>GUN_SALTI (Q8Z289) Endoglucanase precursor (EC 3.2.1.4)| (Endo-1,4-beta-glucanase) (Cellulase) (Carboxymethylcellulase) (CMCase) Length = 369 Score = 27.7 bits (60), Expect = 6.8 Identities = 13/35 (37%), Positives = 17/35 (48%) Frame = -3 Query: 169 PLLREVGSCLFGTMPT*DHFPSSDGYLSFVWLRFG 65 P L+ G+ DHFP SD Y ++V FG Sbjct: 307 PFLQNRGAQAVQRQRVADHFPGSDAYYNYVLTLFG 341
>MNTC_BACSU (O35024) Manganese transport system membrane protein mntC| Length = 435 Score = 27.7 bits (60), Expect = 6.8 Identities = 16/60 (26%), Positives = 31/60 (51%) Frame = -1 Query: 207 VESLKVSSQFYPNLC*GKLDPVCLVQCLHRITSQAQMAIYHLCGCGLDISYHS*YKTIIY 28 VES++ + P+LC L+ + +C+ RI + I+ + G++ YH+ K +Y Sbjct: 318 VESVRKKRRLSPSLCLKALNDLEQERCIERI----ENGIWQITSKGIEKGYHTALKQRMY 373
>SC6A7_HUMAN (Q99884) Sodium-dependent proline transporter (Solute carrier| family 6 member 7) Length = 636 Score = 27.3 bits (59), Expect = 8.9 Identities = 11/48 (22%), Positives = 25/48 (52%) Frame = -2 Query: 152 WILFVWYNAYIGSLPKLRWLFIICVAAVWTSLTIVDIKQLSTENHVVW 9 ++L + + IGS ++RW +C+ W + + +K + + VV+ Sbjct: 197 YVLHIQGSQGIGSPGEIRWNLCLCLLLAWVIVFLCILKGVKSSGKVVY 244 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 61,559,730 Number of Sequences: 219361 Number of extensions: 1212009 Number of successful extensions: 3043 Number of sequences better than 10.0: 32 Number of HSP's better than 10.0 without gapping: 2993 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3042 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 1359926328 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
