Clone Information

BLAST Search Result

Clone Name	rbastl54d01
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	LOX21_HORVU (P93184) Lipoxygenase 2.1, chloroplast precursor (EC...	135	3e-32
2	LOX22_HORVU (Q8GSM3) Lipoxygenase 2.2, chloroplast precursor (EC...	97	8e-21
3	LOX23_HORVU (Q8GSM2) Lipoxygenase 2.3, chloroplast precursor (EC...	52	5e-07
4	LOX1_ARATH (Q06327) Lipoxygenase 1 (EC 1.13.11.12)	49	4e-06
5	LOX5_ORYSA (Q7XV13) Putative lipoxygenase 5 (EC 1.13.11.12)	48	5e-06
6	LOXC_ARATH (P38418) Lipoxygenase, chloroplast precursor (EC 1.13...	47	9e-06
7	LOX1_LENCU (P38414) Lipoxygenase (EC 1.13.11.12)	46	2e-05
8	LOX4_ORYSA (Q53RB0) Probable lipoxygenase 4 (EC 1.13.11.12)	44	1e-04
9	LOXC1_ORYSA (P38419) Lipoxygenase 7, chloroplast precursor (EC 1...	44	1e-04
10	LOX2_ORYSA (P29250) Lipoxygenase 2 (EC 1.13.11.12) (Lipoxygenase...	44	1e-04
11	LOX1_HORVU (P29114) Lipoxygenase 1 (EC 1.13.11.12)	43	2e-04
12	LOXC2_ORYSA (Q84YK8) Probable lipoxygenase 8, chloroplast precur...	42	3e-04
13	LOX3_PEA (P09918) Seed lipoxygenase-3 (EC 1.13.11.12)	42	3e-04
14	LOX4_SOYBN (P38417) Lipoxygenase-4 (EC 1.13.11.12) (L-4) (VSP94)	42	5e-04
15	LOX1_SOYBN (P08170) Seed lipoxygenase-1 (EC 1.13.11.12) (L-1)	42	5e-04
16	LOX2_SOYBN (P09439) Seed lipoxygenase-2 (EC 1.13.11.12) (L-2)	41	6e-04
17	LOXA_PHAVU (P27480) Lipoxygenase 1 (EC 1.13.11.12)	41	6e-04
18	LOX6_ORYSA (Q8H016) Probable lipoxygenase 6 (EC 1.13.11.12)	41	6e-04
19	LOX3_ORYSA (Q7G794) Putative lipoxygenase 3 (EC 1.13.11.12)	41	6e-04
20	LOX3_SOYBN (P09186) Seed lipoxygenase-3 (EC 1.13.11.12) (L-3)	40	0.002
21	LOX2_PEA (P14856) Seed lipoxygenase-2 (EC 1.13.11.12)	40	0.002
22	LOX1_ORYSA (Q76I22) Lipoxygenase 1 (EC 1.13.11.12) (9-lipoxygena...	39	0.003
23	LOXX_SOYBN (P24095) Seed lipoxygenase (EC 1.13.11.12)	37	0.009
24	LOXB_LYCES (P38416) Lipoxygenase B (EC 1.13.11.12)	36	0.021
25	LOX1_SOLTU (P37831) Lipoxygenase 1 (EC 1.13.11.12)	35	0.061
26	LOXA_LYCES (P38415) Lipoxygenase A (EC 1.13.11.12)	33	0.18
27	LOXB_PHAVU (P27481) Lipoxygenase (EC 1.13.11.12) (Fragment)	32	0.30
28	UREE_RHOS4 (Q3J156) Urease accessory protein ureE	32	0.51
29	DEFR7_MOUSE (P50715) Defensin-related cryptdin, related sequence...	31	0.67
30	CELR2_MOUSE (Q9R0M0) Cadherin EGF LAG seven-pass G-type receptor...	30	1.5
31	FKH_DROME (P14734) Fork head protein	29	3.3
32	ASPA_PROMM (Q7V5L6) Probable aspartoacylase (EC 3.5.1.15)	29	3.3
33	Y463_CHRVO (Q7P0V2) UPF0341 protein CV_0463	28	4.3
34	CPD1_DROME (P22058) Chromosomal protein D1	28	4.3
35	MUTS_STRT2 (Q5M6I1) DNA mismatch repair protein mutS	28	5.7
36	MUTS_STRT1 (Q5M1Z0) DNA mismatch repair protein mutS	28	5.7
37	YQC1_SCHPO (O74463) Hypothetical protein C1739.01 in chromosome III	28	7.4
38	PACC_FUSOX (Q870A3) pH-response transcription factor pacC/RIM101	27	9.7
39	EDG8_HUMAN (Q9H228) Sphingosine 1-phosphate receptor Edg-8 (Endo...	27	9.7
40	HDA1_YEAST (P53973) Histone deacetylase HDA1	27	9.7

>LOX21_HORVU (P93184) Lipoxygenase 2.1, chloroplast precursor (EC 1.13.11.12)|
            (LOX-100) (LOX2:Hv:1)
          Length = 936

 Score =  135 bits (339), Expect = 3e-32
 Identities = 67/74 (90%), Positives = 68/74 (91%), Gaps = 5/74 (6%)
 Frame = -2

Query: 334  DGVINQAFEEFEESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVPLRPS-----DGDPTDE 170
            DGVINQAFEEF+ESTRKIVEQVDEWNNDPDRKNRHGAGMVPYV LRPS     DGDPTDE
Sbjct: 863  DGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDGDPTDE 922

Query: 169  KMVMEMGIPNSISI 128
            KMVMEMGIPNSISI
Sbjct: 923  KMVMEMGIPNSISI 936

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>LOX22_HORVU (Q8GSM3) Lipoxygenase 2.2, chloroplast precursor (EC 1.13.11.12)|
            (LOX2:Hv:2)
          Length = 932

 Score = 97.4 bits (241), Expect = 8e-21
 Identities = 44/69 (63%), Positives = 55/69 (79%)
 Frame = -2

Query: 334  DGVINQAFEEFEESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVPLRPSDGDPTDEKMVME 155
            DG +++AF+ F++  R I EQV+EWN D  R+NRHGAG+VPYV LRP +G+P D K VME
Sbjct: 864  DGEVDKAFQVFQKKMRDIAEQVEEWNKDDSRRNRHGAGVVPYVLLRPLNGNPMDAKTVME 923

Query: 154  MGIPNSISI 128
            MGIPNSISI
Sbjct: 924  MGIPNSISI 932

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>LOX23_HORVU (Q8GSM2) Lipoxygenase 2.3, chloroplast precursor (EC 1.13.11.12)|
            (LOX2:Hv:3)
          Length = 896

 Score = 51.6 bits (122), Expect = 5e-07
 Identities = 29/67 (43%), Positives = 39/67 (58%)
 Frame = -2

Query: 328  VINQAFEEFEESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVPLRPSDGDPTDEKMVMEMG 149
            ++  AFE+F    ++    +D  NN+P+ KNR GAG+VPY  L+     P  E  V   G
Sbjct: 835  MVKAAFEKFSGRLKEAEGTIDMRNNNPENKNRCGAGIVPYELLK-----PFSEPGVTGRG 889

Query: 148  IPNSISI 128
            IPNSISI
Sbjct: 890  IPNSISI 896

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>LOX1_ARATH (Q06327) Lipoxygenase 1 (EC 1.13.11.12)|
          Length = 859

 Score = 48.5 bits (114), Expect = 4e-06
 Identities = 28/64 (43%), Positives = 37/64 (57%)
 Frame = -2

Query: 319 QAFEEFEESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVPLRPSDGDPTDEKMVMEMGIPN 140
           +AFE+F E  ++I + +DE N+D   KNR G   +PY  L PS      E  V   GIPN
Sbjct: 801 EAFEKFGEKVKEIEKNIDERNDDETLKNRTGLVKMPYTLLFPS-----SEGGVTGRGIPN 855

Query: 139 SISI 128
           S+SI
Sbjct: 856 SVSI 859

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>LOX5_ORYSA (Q7XV13) Putative lipoxygenase 5 (EC 1.13.11.12)|
          Length = 899

 Score = 48.1 bits (113), Expect = 5e-06
 Identities = 24/63 (38%), Positives = 36/63 (57%)
 Frame = -2

Query: 316  AFEEFEESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVPLRPSDGDPTDEKMVMEMGIPNS 137
            A  EF    R+  E+++  N DP R+NR GAG++PY  + PS G       +   G+PNS
Sbjct: 842  AAREFAADVRRAEEEIERRNADPSRRNRCGAGVLPYELMAPSSGPG-----ITCRGVPNS 896

Query: 136  ISI 128
            ++I
Sbjct: 897  VTI 899

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>LOXC_ARATH (P38418) Lipoxygenase, chloroplast precursor (EC 1.13.11.12)|
          Length = 896

 Score = 47.4 bits (111), Expect = 9e-06
 Identities = 30/67 (44%), Positives = 38/67 (56%)
 Frame = -2

Query: 328  VINQAFEEFEESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVPLRPSDGDPTDEKMVMEMG 149
            VIN AFE F+   + +   +DE N +   KNR GAG+V Y  L+     PT E  V  MG
Sbjct: 835  VINAAFERFKGKLQYLEGVIDERNVNITLKNRAGAGVVKYELLK-----PTSEHGVTGMG 889

Query: 148  IPNSISI 128
            +P SISI
Sbjct: 890  VPYSISI 896

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>LOX1_LENCU (P38414) Lipoxygenase (EC 1.13.11.12)|
          Length = 866

 Score = 46.2 bits (108), Expect = 2e-05
 Identities = 27/69 (39%), Positives = 39/69 (56%)
 Frame = -2

Query: 334 DGVINQAFEEFEESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVPLRPSDGDPTDEKMVME 155
           D V  +AF+ F +   +I E++ + NND   +NR+G   +PY  L PS      E+ +  
Sbjct: 803 DSVPKEAFKRFGKKLAEIEEKLTQRNNDESLRNRYGPVKMPYTLLYPS-----SEEGLTC 857

Query: 154 MGIPNSISI 128
            GIPNSISI
Sbjct: 858 RGIPNSISI 866

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>LOX4_ORYSA (Q53RB0) Probable lipoxygenase 4 (EC 1.13.11.12)|
          Length = 877

 Score = 43.9 bits (102), Expect = 1e-04
 Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
 Frame = -2

Query: 316  AFEEFEESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVPLRPSDGDPTDEK--MVMEMGIP 143
            AF+ F      I  ++ + N +   KNR+G   +PY+ L P+  D T EK   +  MGIP
Sbjct: 813  AFKRFGSRLVDIENRIKDMNGNSALKNRNGPVKMPYMLLYPNTSDVTKEKGQGLTAMGIP 872

Query: 142  NSISI 128
            NSISI
Sbjct: 873  NSISI 877

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>LOXC1_ORYSA (P38419) Lipoxygenase 7, chloroplast precursor (EC 1.13.11.12)|
          Length = 924

 Score = 43.5 bits (101), Expect = 1e-04
 Identities = 25/69 (36%), Positives = 36/69 (52%)
 Frame = -2

Query: 334  DGVINQAFEEFEESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVPLRPSDGDPTDEKMVME 155
            D  +  A++ F    ++I   +D  N D   KNR GAG++PY  ++     P  +  V  
Sbjct: 861  DAAVQAAYDGFAARLKEIEGVIDGRNKDRKLKNRCGAGILPYQLMK-----PFSDSGVTG 915

Query: 154  MGIPNSISI 128
            MGIPNS SI
Sbjct: 916  MGIPNSTSI 924

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>LOX2_ORYSA (P29250) Lipoxygenase 2 (EC 1.13.11.12) (Lipoxygenase L-2)|
          Length = 870

 Score = 43.5 bits (101), Expect = 1e-04
 Identities = 27/65 (41%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
 Frame = -2

Query: 319  QAFEEFEESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVPLRPSDGD-PTDEKMVMEMGIP 143
            +AF+ F     +I  +V   N DP RKNR G    PY  L P+  D   D   +   GIP
Sbjct: 806  EAFKRFGARLTEIESRVVAMNKDPHRKNRVGPTNFPYTLLYPNTSDLKGDAAGLSARGIP 865

Query: 142  NSISI 128
            NSISI
Sbjct: 866  NSISI 870

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>LOX1_HORVU (P29114) Lipoxygenase 1 (EC 1.13.11.12)|
          Length = 862

 Score = 42.7 bits (99), Expect = 2e-04
 Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
 Frame = -2

Query: 319 QAFEEFEESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVPLRPSDGDPTDEKM-VMEMGIP 143
           + F+ F +   +I  +V   N+DP+ KNR+G    PY+ L P+  D       +   GIP
Sbjct: 798 EVFKRFSDRLVEIESKVVGMNHDPELKNRNGPAKFPYMLLYPNTSDHKGAAAGLTAKGIP 857

Query: 142 NSISI 128
           NSISI
Sbjct: 858 NSISI 862

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>LOXC2_ORYSA (Q84YK8) Probable lipoxygenase 8, chloroplast precursor (EC|
            1.13.11.12)
          Length = 941

 Score = 42.4 bits (98), Expect = 3e-04
 Identities = 27/70 (38%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
 Frame = -2

Query: 334  DGVINQAFEEFEESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVPLRP-SDGDPTDEKMVM 158
            D  +  A+  F    ++I   +D  N D   KNR GAG++PY  ++P SD   T      
Sbjct: 878  DAAVQAAYAGFTARLKEIEGVIDGRNKDRKLKNRCGAGILPYQLMKPFSDAGVTG----- 932

Query: 157  EMGIPNSISI 128
             MGIPNS SI
Sbjct: 933  -MGIPNSTSI 941

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>LOX3_PEA (P09918) Seed lipoxygenase-3 (EC 1.13.11.12)|
          Length = 861

 Score = 42.4 bits (98), Expect = 3e-04
 Identities = 24/64 (37%), Positives = 37/64 (57%)
 Frame = -2

Query: 319 QAFEEFEESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVPLRPSDGDPTDEKMVMEMGIPN 140
           +AF++F     +I +++ + NND   +NRHG   +PY  L PS      ++ +   GIPN
Sbjct: 803 EAFKKFGNKLAEIEKKLTQRNNDEKLRNRHGPVEMPYTLLYPS-----SKEGLTFRGIPN 857

Query: 139 SISI 128
           SISI
Sbjct: 858 SISI 861

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>LOX4_SOYBN (P38417) Lipoxygenase-4 (EC 1.13.11.12) (L-4) (VSP94)|
          Length = 853

 Score = 41.6 bits (96), Expect = 5e-04
 Identities = 24/64 (37%), Positives = 36/64 (56%)
 Frame = -2

Query: 319 QAFEEFEESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVPLRPSDGDPTDEKMVMEMGIPN 140
           +AF+ F +   +I +++ E N D   +NR+G   +PY  L PS      E+ +   GIPN
Sbjct: 795 EAFKRFGKKLEEIEKKLIEKNKDETLRNRYGPAKMPYTLLYPS-----SEEGLTFRGIPN 849

Query: 139 SISI 128
           SISI
Sbjct: 850 SISI 853

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>LOX1_SOYBN (P08170) Seed lipoxygenase-1 (EC 1.13.11.12) (L-1)|
          Length = 839

 Score = 41.6 bits (96), Expect = 5e-04
 Identities = 27/65 (41%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
 Frame = -2

Query: 319 QAFEEFEESTRKIVEQVDEWNNDPD-RKNRHGAGMVPYVPLRPSDGDPTDEKMVMEMGIP 143
           QAF++F    ++I E++   NNDP  + NR G   +PY  L PS      E+ +   GIP
Sbjct: 780 QAFQKFGNKLKEIEEKLVRRNNDPSLQGNRLGPVQLPYTLLYPS-----SEEGLTFRGIP 834

Query: 142 NSISI 128
           NSISI
Sbjct: 835 NSISI 839

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>LOX2_SOYBN (P09439) Seed lipoxygenase-2 (EC 1.13.11.12) (L-2)|
          Length = 865

 Score = 41.2 bits (95), Expect = 6e-04
 Identities = 25/64 (39%), Positives = 33/64 (51%)
 Frame = -2

Query: 319 QAFEEFEESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVPLRPSDGDPTDEKMVMEMGIPN 140
           QAF++F    ++I E++   NND    NR G   +PY  L P+    T        GIPN
Sbjct: 808 QAFQKFGNKLKEIEEKLARKNNDQSLSNRLGPVQLPYTLLHPNSEGLTCR------GIPN 861

Query: 139 SISI 128
           SISI
Sbjct: 862 SISI 865

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>LOXA_PHAVU (P27480) Lipoxygenase 1 (EC 1.13.11.12)|
          Length = 862

 Score = 41.2 bits (95), Expect = 6e-04
 Identities = 23/64 (35%), Positives = 37/64 (57%)
 Frame = -2

Query: 319 QAFEEFEESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVPLRPSDGDPTDEKMVMEMGIPN 140
           QAF+ F +  ++I E++   N D   +NR+G   +PY  L P+     +++ +   GIPN
Sbjct: 803 QAFKRFGQKLKEIEEKIMGRNKDSSLRNRNGPVKMPYTVLLPT----CEDEGLTFRGIPN 858

Query: 139 SISI 128
           SISI
Sbjct: 859 SISI 862

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>LOX6_ORYSA (Q8H016) Probable lipoxygenase 6 (EC 1.13.11.12)|
          Length = 918

 Score = 41.2 bits (95), Expect = 6e-04
 Identities = 25/59 (42%), Positives = 31/59 (52%)
 Frame = -2

Query: 304  FEESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVPLRPSDGDPTDEKMVMEMGIPNSISI 128
            F    R+  E ++  N D  RKNR GAG++PY  L PS         V   G+PNSISI
Sbjct: 865  FAADVRRAEETIERRNADHGRKNRCGAGVLPYELLAPS-----SPPGVTCRGVPNSISI 918

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>LOX3_ORYSA (Q7G794) Putative lipoxygenase 3 (EC 1.13.11.12)|
          Length = 866

 Score = 41.2 bits (95), Expect = 6e-04
 Identities = 25/65 (38%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
 Frame = -2

Query: 319 QAFEEFEESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVPLRPSDGDPTDEKM-VMEMGIP 143
           +AF  F +   +I  +V   N D   KNR+G    PY+ L P+  D T     +   GIP
Sbjct: 802 EAFRRFSDRLVEIEGKVVGMNGDAGLKNRNGPAEFPYMLLYPNTSDVTGAAAGITAKGIP 861

Query: 142 NSISI 128
           NSISI
Sbjct: 862 NSISI 866

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>LOX3_SOYBN (P09186) Seed lipoxygenase-3 (EC 1.13.11.12) (L-3)|
          Length = 857

 Score = 39.7 bits (91), Expect = 0.002
 Identities = 24/64 (37%), Positives = 34/64 (53%)
 Frame = -2

Query: 319 QAFEEFEESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVPLRPSDGDPTDEKMVMEMGIPN 140
           +AF+ F     +I  ++ E NND   +NR G   +PY  L PS      ++ +   GIPN
Sbjct: 799 EAFKRFGNKLAQIENKLSERNNDEKLRNRCGPVQMPYTLLLPS-----SKEGLTFRGIPN 853

Query: 139 SISI 128
           SISI
Sbjct: 854 SISI 857

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>LOX2_PEA (P14856) Seed lipoxygenase-2 (EC 1.13.11.12)|
          Length = 864

 Score = 39.7 bits (91), Expect = 0.002
 Identities = 24/64 (37%), Positives = 34/64 (53%)
 Frame = -2

Query: 319 QAFEEFEESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVPLRPSDGDPTDEKMVMEMGIPN 140
           QAF++F     +I  ++   NNDP   +R G   +PY  L PS      ++ +   GIPN
Sbjct: 806 QAFQKFGNKLAEIEAKLTNKNNDPSLYHRVGPVQLPYTLLHPS-----SKEGLTFRGIPN 860

Query: 139 SISI 128
           SISI
Sbjct: 861 SISI 864

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>LOX1_ORYSA (Q76I22) Lipoxygenase 1 (EC 1.13.11.12) (9-lipoxygenase) (r9-LOX1)|
          Length = 863

 Score = 38.9 bits (89), Expect = 0.003
 Identities = 24/65 (36%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
 Frame = -2

Query: 319 QAFEEFEESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVPLRPSDGDPTD-EKMVMEMGIP 143
           +AF+ F     +I  +V   N DP  KNR G    PY  + P+  D     + +   GIP
Sbjct: 799 EAFKRFSRQLVEIESKVLNMNKDPLLKNRVGPANFPYTLMFPNTSDNKGAAEGITARGIP 858

Query: 142 NSISI 128
           NSISI
Sbjct: 859 NSISI 863

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>LOXX_SOYBN (P24095) Seed lipoxygenase (EC 1.13.11.12)|
          Length = 864

 Score = 37.4 bits (85), Expect = 0.009
 Identities = 23/64 (35%), Positives = 33/64 (51%)
 Frame = -2

Query: 319 QAFEEFEESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVPLRPSDGDPTDEKMVMEMGIPN 140
           +AF+ F      I  +++  N+DP  +NR G   +PY  L  S      E+ +   GIPN
Sbjct: 806 EAFKRFGSKLTGIEGKINARNSDPSLRNRTGPVQLPYTLLHRS-----SEEGLTFKGIPN 860

Query: 139 SISI 128
           SISI
Sbjct: 861 SISI 864

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>LOXB_LYCES (P38416) Lipoxygenase B (EC 1.13.11.12)|
          Length = 859

 Score = 36.2 bits (82), Expect = 0.021
 Identities = 24/63 (38%), Positives = 31/63 (49%)
 Frame = -2

Query: 316 AFEEFEESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVPLRPSDGDPTDEKMVMEMGIPNS 137
           AFE F +    I  ++   N+    KNR G   VPY  L      PT E+ +   GIPNS
Sbjct: 802 AFERFGKMLSDIENRIMIMNSHKSWKNRSGPVNVPYTLL-----FPTSEEGLTGKGIPNS 856

Query: 136 ISI 128
           +SI
Sbjct: 857 VSI 859

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>LOX1_SOLTU (P37831) Lipoxygenase 1 (EC 1.13.11.12)|
          Length = 861

 Score = 34.7 bits (78), Expect = 0.061
 Identities = 23/63 (36%), Positives = 30/63 (47%)
 Frame = -2

Query: 316 AFEEFEESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVPLRPSDGDPTDEKMVMEMGIPNS 137
           AF+ F +    I +Q+ + N D    NR G    PY  L      PT E  +   GIPNS
Sbjct: 804 AFDRFGKKLTDIEKQIIQRNGDNILTNRSGPVNAPYTLL-----FPTSEGGLTGKGIPNS 858

Query: 136 ISI 128
           +SI
Sbjct: 859 VSI 861

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>LOXA_LYCES (P38415) Lipoxygenase A (EC 1.13.11.12)|
          Length = 860

 Score = 33.1 bits (74), Expect = 0.18
 Identities = 23/63 (36%), Positives = 29/63 (46%)
 Frame = -2

Query: 316 AFEEFEESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVPLRPSDGDPTDEKMVMEMGIPNS 137
           AFE F      I +Q+ + N +    NR G    PY  L      PT E  +   GIPNS
Sbjct: 803 AFERFGNKLTDIEKQIMQRNGNNILTNRTGPVNAPYTLL-----FPTSEGGLTGKGIPNS 857

Query: 136 ISI 128
           +SI
Sbjct: 858 VSI 860

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>LOXB_PHAVU (P27481) Lipoxygenase (EC 1.13.11.12) (Fragment)|
          Length = 741

 Score = 32.3 bits (72), Expect = 0.30
 Identities = 15/43 (34%), Positives = 25/43 (58%)
 Frame = -2

Query: 319 QAFEEFEESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVPLRPS 191
           +AF+ F +   +I +++ + NND   +NR G   +PY  L PS
Sbjct: 689 EAFKRFGKKLAEIEKKLVQKNNDETLRNRTGPAKMPYTLLYPS 731

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>UREE_RHOS4 (Q3J156) Urease accessory protein ureE|
          Length = 182

 Score = 31.6 bits (70), Expect = 0.51
 Identities = 19/53 (35%), Positives = 25/53 (47%)
 Frame = -1

Query: 281 RGAGG*VEQRPRPEKPTRRRHGAVCAAQAVGR*SHGREDGDGDGHPQQHLHLS 123
           RG G  +E R  P +P     GA    + +G   HG   G G  HP  H+H+S
Sbjct: 120 RGLGLTLEPRTEPFRP---EGGAYGHGRTLGH-DHGPAQGHGHDHPHVHVHIS 168

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>DEFR7_MOUSE (P50715) Defensin-related cryptdin, related sequence 7 precursor|
           (Cryptdin-related protein 4C-2) (CRS4C)
          Length = 91

 Score = 31.2 bits (69), Expect = 0.67
 Identities = 13/22 (59%), Positives = 13/22 (59%)
 Frame = +1

Query: 253 RCSTHPPAPRSSWCSPRTPQMP 318
           RC   PP PR SWC PR P  P
Sbjct: 64  RCPRCPPCPRCSWC-PRCPTCP 84

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>CELR2_MOUSE (Q9R0M0) Cadherin EGF LAG seven-pass G-type receptor 2 precursor|
           (Flamingo 1) (mFmi1)
          Length = 2920

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = +3

Query: 213 GTMPAPCRFFRSGSLFHSSTCSTIFLVLSSNSSNAWLIT 329
           G    PCR   SG    S  C+ +  +  +++SN WL T
Sbjct: 31  GDQVGPCRSLGSGGRSSSGACAPVGWLCPASASNLWLYT 69

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>FKH_DROME (P14734) Fork head protein|
          Length = 510

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 17/44 (38%), Positives = 20/44 (45%)
 Frame = +3

Query: 123 AQMEMLLGMPISITIFSSVGSPSDGLSGTYGTMPAPCRFFRSGS 254
           A M   LG        S+    + GLSGTYG MP   R   +GS
Sbjct: 144 ASMGSPLGNMGGCMAMSAASMSAAGLSGTYGAMPPGSREMETGS 187

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>ASPA_PROMM (Q7V5L6) Probable aspartoacylase (EC 3.5.1.15)|
          Length = 304

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -2

Query: 271 VDEWNNDPDRKNRHGAGMVPYV 206
           +D+W+  P+  N HG G+VP +
Sbjct: 23  LDQWSQTPELINTHGVGVVPVI 44

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>Y463_CHRVO (Q7P0V2) UPF0341 protein CV_0463|
          Length = 258

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 16/35 (45%), Positives = 17/35 (48%)
 Frame = -1

Query: 248 RPEKPTRRRHGAVCAAQAVGR*SHGREDGDGDGHP 144
           R E  T  +HGAV A    G   H RE G G G P
Sbjct: 45  RLELLTTGKHGAVYAEFVEGAARHRREQGGGRGQP 79

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>CPD1_DROME (P22058) Chromosomal protein D1|
          Length = 355

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 20/57 (35%), Positives = 29/57 (50%)
 Frame = -1

Query: 320 PGI*GVRGEHQEDRGAGG*VEQRPRPEKPTRRRHGAVCAAQAVGR*SHGREDGDGDG 150
           PGI   RG   +++G+ G   QR RP K ++ ++      +       G EDGDGDG
Sbjct: 31  PGI-KKRGRPAKNKGSSGGGGQRGRPPKASKIQNDEDPEDE-------GEEDGDGDG 79

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>MUTS_STRT2 (Q5M6I1) DNA mismatch repair protein mutS|
          Length = 852

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = -2

Query: 331 GVINQAFEEFEESTRKIVEQVDEWNNDPDRKNRHGAGM 218
           G+I   F+E  +  RK++ +   W  D + K R  +G+
Sbjct: 410 GIIRDGFDETLDKYRKVMSEGTSWIADIEAKEREASGI 447

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>MUTS_STRT1 (Q5M1Z0) DNA mismatch repair protein mutS|
          Length = 852

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = -2

Query: 331 GVINQAFEEFEESTRKIVEQVDEWNNDPDRKNRHGAGM 218
           G+I   F+E  +  RK++ +   W  D + K R  +G+
Sbjct: 410 GIIRDGFDETLDKYRKVMSEGTSWIADIEAKEREASGI 447

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>YQC1_SCHPO (O74463) Hypothetical protein C1739.01 in chromosome III|
          Length = 547

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = +3

Query: 183 SPSDGLSGTYGTMPAPCRFFRSGSLFHSSTC 275
           +P +G+S        PC+FFR+G+      C
Sbjct: 31  TPENGVSTVKNLQHVPCKFFRNGTCTAGENC 61

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>PACC_FUSOX (Q870A3) pH-response transcription factor pacC/RIM101|
          Length = 609

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 4/57 (7%)
 Frame = +3

Query: 147 MPISITIFSSVGSP----SDGLSGTYGTMPAPCRFFRSGSLFHSSTCSTIFLVLSSN 305
           M   +T  SS G+P    S  +S T G  P+P     S    H ST S ++  L ++
Sbjct: 397 MASPLTAISSTGTPAVTASSSMSYTSGHSPSPSSSAMSPQSRHGSTASVMYPTLPTS 453

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>EDG8_HUMAN (Q9H228) Sphingosine 1-phosphate receptor Edg-8 (Endothelial|
           differentiation sphingolipid G-protein-coupled receptor
           8) (Sphingosine 1-phosphate receptor 5) (S1P5)
          Length = 398

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 16/32 (50%), Positives = 19/32 (59%)
 Frame = +2

Query: 26  NLVLIPIIPTAGPRD*RHSYLRLVELHTHTQG 121
           N +L PII T   RD RH+ LRLV    H+ G
Sbjct: 298 NSLLNPIIYTLTNRDLRHALLRLVCCGRHSCG 329

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>HDA1_YEAST (P53973) Histone deacetylase HDA1|
          Length = 706

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 11/28 (39%), Positives = 19/28 (67%)
 Frame = -2

Query: 334 DGVINQAFEEFEESTRKIVEQVDEWNND 251
           DG+ N   E FEE+T  I++  +EW+++
Sbjct: 678 DGLNNIIEERFEEATDFILDSFEEWSDE 705


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 57,224,111
Number of Sequences: 219361
Number of extensions: 1195766
Number of successful extensions: 3583
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 3413
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3558
length of database: 80,573,946
effective HSP length: 87
effective length of database: 61,489,539
effective search space used: 1475748936
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result