ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl54c12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1GRK5_HUMAN (P34947) G protein-coupled receptor kinase 5 (EC 2.7.... 28 6.8
2TS1R1_MOUSE (Q99PG6) Taste receptor type 1 member 1 precursor (G... 28 6.8
3PPCE_FLAME (P27028) Prolyl endopeptidase precursor (EC 3.4.21.26... 28 6.8
4CAF5_SCHPO (O94528) Caffeine resistance protein 5 28 6.8
5TS1R1_HUMAN (Q7RTX1) Taste receptor type 1 member 1 precursor (G... 28 8.9
6GRK5_BOVIN (P43249) G protein-coupled receptor kinase 5 (EC 2.7.... 28 8.9
7POL2_BRSV (P14547) RNA2 polyprotein (P2) [Contains: P2A protein ... 28 8.9
8HV16_MOUSE (P01783) Ig heavy chain V region MOPC 21 precursor (F... 28 8.9

>GRK5_HUMAN (P34947) G protein-coupled receptor kinase 5 (EC 2.7.11.16) (G|
           protein-coupled receptor kinase GRK5)
          Length = 590

 Score = 28.1 bits (61), Expect = 6.8
 Identities = 14/32 (43%), Positives = 15/32 (46%)
 Frame = +3

Query: 18  FTNVRQLGKTGVSLPHLNFL*RGHPPHPQKKG 113
           F  +   G  G   P LN   R HPP P KKG
Sbjct: 521 FKELNVFGPNGTLPPDLN---RNHPPEPPKKG 549



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>TS1R1_MOUSE (Q99PG6) Taste receptor type 1 member 1 precursor (G-protein|
           coupled receptor 70)
          Length = 842

 Score = 28.1 bits (61), Expect = 6.8
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = -3

Query: 162 LFLLGPTGIFVWKLILPLFFADGGDVPFI 76
           L L+G  G+F W+L  P+  + GG + F+
Sbjct: 580 LLLIGTAGLFAWRLHTPVVRSAGGRLCFL 608



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>PPCE_FLAME (P27028) Prolyl endopeptidase precursor (EC 3.4.21.26)|
           (Proline-specific endopeptidase) (PSE) (Post-proline
           cleaving enzyme) (PE)
          Length = 705

 Score = 28.1 bits (61), Expect = 6.8
 Identities = 14/40 (35%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
 Frame = +2

Query: 11  NIIYKRKAIGKNWSFIAPFEFSIKGT---SPPSAKKRGSI 121
           +++Y++ A GK   F+ P +FS KGT   +  S  K+G++
Sbjct: 119 SVLYRKDAAGKTEVFLDPNKFSEKGTTSLASVSFNKKGTL 158



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>CAF5_SCHPO (O94528) Caffeine resistance protein 5|
          Length = 531

 Score = 28.1 bits (61), Expect = 6.8
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = -3

Query: 168 GSLFLLGPTGIFVWKLILPLFFADGGD 88
           G+L  L    +F++K+++P F A GGD
Sbjct: 366 GALITLACYFVFLYKVMIPAFMASGGD 392



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>TS1R1_HUMAN (Q7RTX1) Taste receptor type 1 member 1 precursor (G-protein|
           coupled receptor 70) (Gm148)
          Length = 841

 Score = 27.7 bits (60), Expect = 8.9
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = -3

Query: 162 LFLLGPTGIFVWKLILPLFFADGGDVPFI 76
           L LLG  G+F W L  P+  + GG + F+
Sbjct: 579 LLLLGTAGLFAWHLDTPVVRSAGGRLCFL 607



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>GRK5_BOVIN (P43249) G protein-coupled receptor kinase 5 (EC 2.7.11.16) (G|
           protein-coupled receptor kinase GRK5)
          Length = 590

 Score = 27.7 bits (60), Expect = 8.9
 Identities = 14/32 (43%), Positives = 15/32 (46%)
 Frame = +3

Query: 18  FTNVRQLGKTGVSLPHLNFL*RGHPPHPQKKG 113
           F  +   G  G   P LN   R HPP P KKG
Sbjct: 521 FKELNVFGPHGTLSPDLN---RSHPPEPPKKG 549



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>POL2_BRSV (P14547) RNA2 polyprotein (P2) [Contains: P2A protein (2A);|
           Movement protein (2B-MP); Coat protein (2C-CP)]
          Length = 1357

 Score = 27.7 bits (60), Expect = 8.9
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -2

Query: 106 FCGWGGCPLYRKFKWGNETPVFPNC 32
           FC  GG PL  + KW +E    P+C
Sbjct: 95  FCSCGGIPLPGENKWEDELVPIPDC 119



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>HV16_MOUSE (P01783) Ig heavy chain V region MOPC 21 precursor (Fragment)|
          Length = 136

 Score = 27.7 bits (60), Expect = 8.9
 Identities = 12/27 (44%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
 Frame = -2

Query: 121 DTAPFFCG-WGGCPLYRKFKWGNETPV 44
           DTA ++C  WG  P Y    WG  T V
Sbjct: 106 DTAMYYCARWGNYPYYAMDYWGQGTSV 132


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,609,976
Number of Sequences: 219361
Number of extensions: 478302
Number of successful extensions: 1521
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1512
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1521
length of database: 80,573,946
effective HSP length: 32
effective length of database: 73,554,394
effective search space used: 1765305456
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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