>gb|AC113122.9| Mus musculus chromosome 8, clone RP23-349P4, complete sequence
          Length = 203728

 Score = 42.1 bits (21), Expect = 0.53
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 62    ccatttgaattttctataaag 82
             |||||||||||||||||||||
Sbjct: 23208 ccatttgaattttctataaag 23188

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 0.53
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 118     tatcaacttccaaacaaaaat 138
               |||||||||||||||||||||
Sbjct: 9829802 tatcaacttccaaacaaaaat 9829822



 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 1        ctcacagatcaacatcatt 19
                |||||||||||||||||||
Sbjct: 18717890 ctcacagatcaacatcatt 18717872

>dbj|AP005822.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0456E06
          Length = 164353

 Score = 42.1 bits (21), Expect = 0.53
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 118    tatcaacttccaaacaaaaat 138
              |||||||||||||||||||||
Sbjct: 120044 tatcaacttccaaacaaaaat 120064

>dbj|AP005695.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0063H02
          Length = 152326

 Score = 42.1 bits (21), Expect = 0.53
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 118   tatcaacttccaaacaaaaat 138
             |||||||||||||||||||||
Sbjct: 26437 tatcaacttccaaacaaaaat 26457

>gb|AC127294.4| Mus musculus BAC clone RP23-386L1 from chromosome 3, complete sequence
          Length = 212556

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 134    aaaatgccagtaggtcccaataaa 157
              ||||||||||||| ||||||||||
Sbjct: 119237 aaaatgccagtagatcccaataaa 119260

>gb|AC125339.4| Mus musculus BAC clone RP24-356P17 from chromosome 17, complete
             sequence
          Length = 156282

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 122   aacttccaaacaaaaatgcc 141
             ||||||||||||||||||||
Sbjct: 16747 aacttccaaacaaaaatgcc 16766

>emb|Z95310.1|CEH40L08 Caenorhabditis elegans Fosmid H40L08, complete sequence
          Length = 15122

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 122  aacttccaaacaaaaatgcc 141
            ||||||||||||||||||||
Sbjct: 3649 aacttccaaacaaaaatgcc 3668

>gb|AC138310.3| Mus musculus BAC clone RP23-205H21 from chromosome 17, complete sequence
          Length = 195483

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 122    aacttccaaacaaaaatgcc 141
              ||||||||||||||||||||
Sbjct: 160602 aacttccaaacaaaaatgcc 160621

>gb|AC146816.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone B1434D10 map
             near E1419S, complete sequence
          Length = 133421

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                        
Query: 52    tttcattgccccatttgaattttctat 78
             |||||||||||||| || |||||||||
Sbjct: 85596 tttcattgccccatgtgtattttctat 85622

>gb|AC146506.1| Solanum demissum chromosome 5 BAC PGEC989P08 genomic sequence, complete
             sequence
          Length = 121915

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 63    catttgaattttctataaa 81
             |||||||||||||||||||
Sbjct: 75708 catttgaattttctataaa 75690

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                           
Query: 52       tttcattgccccatttgaattttctat 78
                |||||||||||||| || |||||||||
Sbjct: 23818355 tttcattgccccatgtgtattttctat 23818329

>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence
          Length = 4895836

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 34      aattgggaaaaactggagt 52
               |||||||||||||||||||
Sbjct: 2986594 aattgggaaaaactggagt 2986576

>gb|AC025161.18| Homo sapiens 12 BAC RP11-669B18 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 83265

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 59    gccccatttgaattttcta 77
             |||||||||||||||||||
Sbjct: 24568 gccccatttgaattttcta 24550

>gb|AC154568.2| Mus musculus BAC clone RP23-246L11 from chromosome 16, complete
           sequence
          Length = 182206

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 145 aggtcccaataaaaacaga 163
           |||||||||||||||||||
Sbjct: 409 aggtcccaataaaaacaga 427

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 36      ttgggaaaaactggagttt 54
               |||||||||||||||||||
Sbjct: 2572908 ttgggaaaaactggagttt 2572926

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                           
Query: 52       tttcattgccccatttgaattttctat 78
                |||||||||||||| || |||||||||
Sbjct: 23811443 tttcattgccccatgtgtattttctat 23811417

>gb|AC092960.3| Homo sapiens 3 BAC RP11-393B14 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 172507

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 63     catttgaattttctataaa 81
              |||||||||||||||||||
Sbjct: 161099 catttgaattttctataaa 161081

>gb|AC155275.1| Mus musculus BAC clone RP23-20M21 from chromosome 16, complete sequence
          Length = 193211

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 145   aggtcccaataaaaacaga 163
             |||||||||||||||||||
Sbjct: 35494 aggtcccaataaaaacaga 35476

>dbj|AP005583.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0406E03
          Length = 201069

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 36     ttgggaaaaactggagttt 54
              |||||||||||||||||||
Sbjct: 159498 ttgggaaaaactggagttt 159516

>dbj|AP005582.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0006E02
          Length = 141782

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 36    ttgggaaaaactggagttt 54
             |||||||||||||||||||
Sbjct: 18186 ttgggaaaaactggagttt 18204

>dbj|AP005492.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0077L03
          Length = 171177

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 1     ctcacagatcaacatcatt 19
             |||||||||||||||||||
Sbjct: 43641 ctcacagatcaacatcatt 43623

>emb|AL929259.13| Mouse DNA sequence from clone RP23-141E12 on chromosome 2, complete
              sequence
          Length = 153645

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 64     atttgaattttctataaag 82
              |||||||||||||||||||
Sbjct: 137167 atttgaattttctataaag 137149

>gb|AC171730.1| Lycopersicon esculentum chromosome 01 clone C01HBa0256E08, complete
             sequence
          Length = 147630

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 62    ccatttgaattttctataa 80
             |||||||||||||||||||
Sbjct: 53107 ccatttgaattttctataa 53125


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,925,898
Number of Sequences: 3902068
Number of extensions: 1925898
Number of successful extensions: 131438
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 131202
Number of HSP's gapped (non-prelim): 236
length of query: 170
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 148
effective length of database: 17,147,199,772
effective search space: 2537785566256
effective search space used: 2537785566256
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)