Clone Name | rbastl54c09 |
---|---|
Clone Library Name | barley_pub |
>XYL1_ARATH (Q9S7Y7) Alpha-xylosidase precursor (EC 3.2.1.-)| Length = 915 Score = 32.0 bits (71), Expect = 0.39 Identities = 14/30 (46%), Positives = 19/30 (63%) Frame = -3 Query: 345 EGEKRGVTMEVGGLELPLGKSFTMTWNTHI 256 E E + V +EV GLE+ +GK F M+W I Sbjct: 885 EEENKSVMVEVRGLEMLVGKDFNMSWKMGI 914
>MUC5B_HUMAN (Q9HC84) Mucin-5B precursor (Mucin 5 subtype B, tracheobronchial)| (High molecular weight salivary mucin MG1) (Sublingual gland mucin) Length = 5703 Score = 31.6 bits (70), Expect = 0.50 Identities = 14/42 (33%), Positives = 21/42 (50%) Frame = +2 Query: 20 NGRMQFHSPARLSFNG*IRVHKWCSRVTNPHTSYITDSSTMN 145 N R F P LS WCSR+T+P++++ S +N Sbjct: 600 NARNSFEDPCSLSVENENYARHWCSRLTDPNSAFSRCHSIIN 641
>Y1742_STRPN (Q97P99) UPF0348 protein SP1742| Length = 365 Score = 28.1 bits (61), Expect = 5.6 Identities = 12/32 (37%), Positives = 20/32 (62%) Frame = +1 Query: 25 PNAVSFPCKTELQWVNQSSQMVFEGNQPPHKL 120 P+++S+P KT+ W + + + F GN P H L Sbjct: 125 PDSLSYPQKTQAMW-KEFAGLDFSGNTPNHVL 155
>Y1587_STRR6 (Q8DNR1) UPF0348 protein spr1587| Length = 365 Score = 28.1 bits (61), Expect = 5.6 Identities = 12/32 (37%), Positives = 20/32 (62%) Frame = +1 Query: 25 PNAVSFPCKTELQWVNQSSQMVFEGNQPPHKL 120 P+++S+P KT+ W + + + F GN P H L Sbjct: 125 PDSLSYPQKTQAMW-KEFAGLDFSGNTPNHVL 155
>ITPK1_HUMAN (Q13572) Inositol-tetrakisphosphate 1-kinase (EC 2.7.1.134)| (Inositol-triphosphate 5/6-kinase) (EC 2.7.1.-) (Inositol 1,3,4-trisphosphate 5/6-kinase) Length = 414 Score = 27.7 bits (60), Expect = 7.3 Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 9/54 (16%) Frame = +1 Query: 28 NAVSFP--CKTELQWVNQSSQMVFEGNQ-------PPHKLHNRLKHDELLFKLY 162 N ++FP CKT + S +M NQ PP + N + H+ +L+K++ Sbjct: 148 NGLTFPFICKTRVAHGTNSHEMAIVFNQEGLNAIQPPCVVQNFINHNAVLYKVF 201
>ITPK1_MOUSE (Q8BYN3) Inositol-tetrakisphosphate 1-kinase (EC 2.7.1.134)| (Inositol-triphosphate 5/6-kinase) (EC 2.7.1.-) (Inositol 1,3,4-trisphosphate 5/6-kinase) Length = 419 Score = 27.7 bits (60), Expect = 7.3 Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 9/54 (16%) Frame = +1 Query: 28 NAVSFP--CKTELQWVNQSSQMVFEGNQ-------PPHKLHNRLKHDELLFKLY 162 N ++FP CKT + S +M NQ PP + N + H+ +L+K++ Sbjct: 148 NGLAFPFICKTRVAHGTNSHEMAIVFNQEGLNAIQPPCVVQNFINHNAVLYKVF 201
>ITPK1_BOVIN (P0C0T1) Inositol-tetrakisphosphate 1-kinase (EC 2.7.1.134)| (Inositol-triphosphate 5/6-kinase) (EC 2.7.1.-) (Inositol 1,3,4-trisphosphate 5/6-kinase) Length = 419 Score = 27.7 bits (60), Expect = 7.3 Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 9/54 (16%) Frame = +1 Query: 28 NAVSFP--CKTELQWVNQSSQMVFEGNQ-------PPHKLHNRLKHDELLFKLY 162 N ++FP CKT + S +M NQ PP + N + H+ +L+K++ Sbjct: 148 NGLAFPFICKTRVAHGTNSHEMAIVFNQEGLSAIQPPCVVQNFINHNAVLYKVF 201
>DLDH_CANFA (P49819) Dihydrolipoyl dehydrogenase, mitochondrial precursor (EC| 1.8.1.4) (Dihydrolipoamide dehydrogenase) Length = 509 Score = 27.7 bits (60), Expect = 7.3 Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 6/46 (13%) Frame = +1 Query: 160 YKFKLDTTTTSRTKKAHA------DGSRGKCSSILLCFDVRVPCHG 279 +KFKL+T T TKK+ +G+ G + ++ C DV + C G Sbjct: 270 FKFKLNTKVTGATKKSDGKIDVSIEGASGGKAEVITC-DVLLVCIG 314
>END3_YEAST (P39013) Protein END3| Length = 349 Score = 27.3 bits (59), Expect = 9.5 Identities = 12/36 (33%), Positives = 23/36 (63%) Frame = +1 Query: 88 VFEGNQPPHKLHNRLKHDELLFKLYKFKLDTTTTSR 195 +F G +P + N++ HD++L LY KLD++ ++ Sbjct: 15 IFSGLKP---IENKVNHDQVLPILYNSKLDSSVLNK 47 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 43,163,208 Number of Sequences: 219361 Number of extensions: 660327 Number of successful extensions: 1872 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 1830 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1871 length of database: 80,573,946 effective HSP length: 92 effective length of database: 60,392,734 effective search space used: 1449425616 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)