>TMPS5_MOUSE (Q9ER04) Transmembrane protease, serine 5 (EC 3.4.21.-) (Spinesin)|
          Length = 455

 Score = 30.8 bits (68), Expect = 0.85
 Identities = 21/69 (30%), Positives = 33/69 (47%)
 Frame = -2

Query: 351 DCPWDSCEEGWLPGSP*YQRHDCG*RCLSMVILNPALVLNME*PERLDQSVWVLVCHKCL 172
           +CP  SCEE  LP  P         + +S  I    L+L ++   R D   W+LVCH+  
Sbjct: 92  NCPGVSCEEELLPSLP---------KTVSFRINGEDLLLQVQVRARPD---WLLVCHEGW 139

Query: 171 DQSVWVLLC 145
             ++ + +C
Sbjct: 140 SPALGMHIC 148

>ENV_BAEVM (P10269) Env polyprotein precursor (Coat polyprotein) [Contains:|
           Outer membrane protein GP70; Transmembrane protein p20E]
          Length = 563

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 11/25 (44%), Positives = 18/25 (72%)
 Frame = -3

Query: 230 WSNLNALTNLSGYLCAINALTNLCG 156
           +SN  ++TN++G +CA+N    LCG
Sbjct: 304 FSNCTSITNVTGPICAVNGSVFLCG 328

>ZN709_HUMAN (Q8N972) Zinc finger protein 709|
          Length = 641

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 20/83 (24%), Positives = 36/83 (43%), Gaps = 1/83 (1%)
 Frame = +2

Query: 29  GQDVQETTHNMFNIRD-TRFHNTDWSRCLKYYA*HVQLTGHKSTHTDWSRHLWHTSTQTD 205
           G+ + +T +   N +  TR    + S C K Y  H  L  H  +HT+   + +H   +  
Sbjct: 80  GETISQTPNPKPNKKTFTRVKPYECSVCGKDYMCHSSLNRHMRSHTEHRSYEYHKYGEKS 139

Query: 206 WSRRSGYSMFNTRAGFKITMLKH 274
           +  +     F+ R+ F+I    H
Sbjct: 140 YECKECGKRFSFRSSFRIHERTH 162

>HEMH_ERWCT (Q6D7Z4) Ferrochelatase (EC 4.99.1.1) (Protoheme ferro-lyase) (Heme|
           synthetase)
          Length = 320

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 12/34 (35%), Positives = 21/34 (61%)
 Frame = +1

Query: 160 HRLVKAFMAHKYPDRLVKAFRLLHVQHKSRVQDY 261
           HR+ ++F  H  PDRLV ++  + V++ +   DY
Sbjct: 174 HRVEQSFAEHGEPDRLVISYHGIPVRYANEGDDY 207

>KLF3_MOUSE (Q60980) Krueppel-like factor 3 (Basic krueppel-like factor)|
           (CACCC-box-binding protein BKLF) (TEF-2)
          Length = 344

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 12/31 (38%), Positives = 14/31 (45%)
 Frame = +2

Query: 71  RDTRFHNTDWSRCLKYYA*HVQLTGHKSTHT 163
           R  R H  D+  C K Y     L  H+ THT
Sbjct: 254 RKRRIHRCDYDGCNKVYTKSSHLKAHRRTHT 284

>KLF3_HUMAN (P57682) Krueppel-like factor 3 (Basic krueppel-like factor)|
           (CACCC-box-binding protein BKLF) (TEF-2)
          Length = 345

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 12/31 (38%), Positives = 14/31 (45%)
 Frame = +2

Query: 71  RDTRFHNTDWSRCLKYYA*HVQLTGHKSTHT 163
           R  R H  D+  C K Y     L  H+ THT
Sbjct: 255 RKRRIHRCDYDGCNKVYTKSSHLKAHRRTHT 285

>Y3012_BACCR (Q81BX6) Putative adenine deaminase BC_3012 (EC 3.5.4.2) (Adenase)|
           (Adenine aminase)
          Length = 589

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = +2

Query: 146 HKSTHTDWSRHLWHTSTQTDWSRRSGYSMFNTRAGFKI 259
           H++ H DWS+H   T    DWS      +F+ + G  +
Sbjct: 375 HEALHIDWSKHK-VTPLSLDWSIEKEDMIFSNKTGIHL 411

>Y1237_ARCFU (O29031) Hypothetical protein AF1237 precursor|
          Length = 297

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 24/89 (26%), Positives = 37/89 (41%), Gaps = 19/89 (21%)
 Frame = +3

Query: 129 MFNSQGTKVPTQIGQ------------------GIYGTQVPRQIGQGVQVTPCSTQEQGS 254
           MF + GTKV   IG                   G+ G  +   +G G+  +P  ++EQ  
Sbjct: 104 MFVNNGTKVVNWIGYITLKKAPEGYEDLVGSFTGLTGCSMCHGVGMGLPPSPQESEEQLG 163

Query: 255 RLPCLSTFIHSR-DADIKGTLVASLPHKN 338
            + CL+   H++ D  + G L   L  KN
Sbjct: 164 NIDCLA--CHAKPDVYVSGVLGIKLGLKN 190

>KLF12_MOUSE (O35738) Krueppel-like factor 12 (Transcriptional repressor|
           AP-2rep)
          Length = 402

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 12/31 (38%), Positives = 14/31 (45%)
 Frame = +2

Query: 71  RDTRFHNTDWSRCLKYYA*HVQLTGHKSTHT 163
           R  R H  D+  C K Y     L  H+ THT
Sbjct: 312 RKRRIHRCDFEGCNKVYTKSSHLKAHRRTHT 342

>KLF12_HUMAN (Q9Y4X4) Krueppel-like factor 12 (Transcriptional repressor|
           AP-2rep)
          Length = 402

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 12/31 (38%), Positives = 14/31 (45%)
 Frame = +2

Query: 71  RDTRFHNTDWSRCLKYYA*HVQLTGHKSTHT 163
           R  R H  D+  C K Y     L  H+ THT
Sbjct: 312 RKRRIHRCDFEGCNKVYTKSSHLKAHRRTHT 342

>SYE_MESFL (Q6F0G6) Glutamyl-tRNA synthetase (EC 6.1.1.17) (Glutamate--tRNA|
           ligase) (GluRS)
          Length = 482

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
 Frame = +1

Query: 43  GNYT*HVQHKRYKIPQHRLVKVFKILRITCSTHRAQK-YPHRLVKAFMAHKY 195
           G Y    +  RY+    +L+ + K  R  C+T   +K Y  ++ K  +A KY
Sbjct: 82  GKYMQSQKFGRYQELAEKLISIKKAYRCFCTTEELEKDYEDQVAKGIVATKY 133

>XKDV_BACSU (P54341) Phage-like element PBSX protein xkdV|
          Length = 687

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 14/46 (30%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
 Frame = +2

Query: 104 RCLKYYA*HVQLTGHKSTHTD-WSRHLWHTSTQTDWSRRSGYSMFN 238
           R  +Y+  +   T     H   W RH W  S  T W + SG++  N
Sbjct: 493 RFTQYFYGNADTTSGSYDHVGTWIRHWWADSGWTAWQKISGFAHAN 538


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,002,541
Number of Sequences: 219361
Number of extensions: 1054203
Number of successful extensions: 2610
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2519
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2609
length of database: 80,573,946
effective HSP length: 94
effective length of database: 59,954,012
effective search space used: 1438896288
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)