Clone Name | rbastl54c01 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | HCP1_BRARE (Q7ZWG6) Heme carrier protein 1 | 30 | 1.8 | 2 | FRHA_METVO (Q00390) Coenzyme F420 hydrogenase alpha subunit (EC ... | 28 | 6.8 |
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>HCP1_BRARE (Q7ZWG6) Heme carrier protein 1| Length = 481 Score = 29.6 bits (65), Expect = 1.8 Identities = 10/23 (43%), Positives = 19/23 (82%) Frame = -3 Query: 184 VITVYLGCGEIFLLS*VSSPRCY 116 V+TV+LGC ++++L +S+P C+ Sbjct: 297 VVTVHLGCSDLYVLYELSAPLCW 319
>FRHA_METVO (Q00390) Coenzyme F420 hydrogenase alpha subunit (EC 1.12.98.1)| (8-hydroxy-5-deazaflavin-reducing hydrogenase alpha subunit) (FRH) Length = 398 Score = 27.7 bits (60), Expect = 6.8 Identities = 17/56 (30%), Positives = 26/56 (46%) Frame = +1 Query: 187 THVTEMSQLHDDHYLLGLSSYLQRQNAEYMAAISFAPTDILQSSFMSKSSVKACIL 354 T + E HD YL S+Y R+N E + P D+ + + +V+AC L Sbjct: 202 TEIPEKLGYHDFGYLATDSTYGNRENIEQKKVHEYTPYDV----YEKEVAVQACQL 253 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 60,188,837 Number of Sequences: 219361 Number of extensions: 1182078 Number of successful extensions: 1924 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 1887 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1924 length of database: 80,573,946 effective HSP length: 111 effective length of database: 56,224,875 effective search space used: 1349397000 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)