ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl54b12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ADA20_HUMAN (O43506) ADAM 20 precursor (EC 3.4.24.-) (A disinteg... 29 3.9

>ADA20_HUMAN (O43506) ADAM 20 precursor (EC 3.4.24.-) (A disintegrin and|
           metalloproteinase domain 20)
          Length = 726

 Score = 28.9 bits (63), Expect = 3.9
 Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
 Frame = -1

Query: 177 LARVLGFELGPS*SNRWCICTIDHCAVMYVYC*YRPK-CNVNWQRIWAS 34
           L   LG  LG     +WC+C +  C +M+ Y     K  N ++ + W S
Sbjct: 340 LGHELGHNLGMQHDTQWCVCELQWC-IMHAYRKVTTKFSNCSYAQYWDS 387


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,096,552
Number of Sequences: 219361
Number of extensions: 428003
Number of successful extensions: 938
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 925
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 938
length of database: 80,573,946
effective HSP length: 40
effective length of database: 71,799,506
effective search space used: 1723188144
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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