ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl54b11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_482249.1| Oryza sativa (japonica cultivar-group), mRNA 96 7e-17
2dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 96 7e-17
3dbj|AP003947.3| Oryza sativa (japonica cultivar-group) genomic D... 96 7e-17
4dbj|AK120068.1| Oryza sativa (japonica cultivar-group) cDNA clon... 96 7e-17
5dbj|AP003904.3| Oryza sativa (japonica cultivar-group) genomic D... 96 7e-17
6dbj|AK105074.1| Oryza sativa (japonica cultivar-group) cDNA clon... 96 7e-17
7ref|XM_482258.1| Oryza sativa (japonica cultivar-group), mRNA 60 4e-06
8ref|XM_450614.1| Oryza sativa (japonica cultivar-group), mRNA 60 4e-06
9dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 60 4e-06
10dbj|AP005572.3| Oryza sativa (japonica cultivar-group) genomic D... 60 4e-06
11dbj|AK069520.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 4e-06
12dbj|AK068165.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 4e-06
13gb|BC034057.1| Mus musculus elastin, mRNA (cDNA clone IMAGE:4038... 48 0.015
14gb|AC091250.2| Mus musculus strain C57BL6/J chromosome 5 clone R... 48 0.015
15ref|NM_007925.2| Mus musculus elastin (Eln), mRNA 48 0.015
16dbj|AK080277.1| Mus musculus 3 days neonate thymus cDNA, RIKEN f... 48 0.015
17dbj|AK041860.1| Mus musculus 3 days neonate thymus cDNA, RIKEN f... 48 0.015
18gb|AF289665.1|AF289665 Mus musculus EIF4H gene, partial cds; LIM... 48 0.015
19gb|BC051649.1| Mus musculus elastin, mRNA (cDNA clone MGC:51697 ... 48 0.015
20gb|U08210.1|MMU08210 Mus musculus tropoelastin mRNA, complete cds 48 0.015
21ref|XM_663312.1| Cryptosporidium hominis TU502 hypothetical prot... 44 0.23
22ref|XM_545344.2| PREDICTED: Canis familiaris similar to glucose-... 42 0.90
23gb|AC009384.7| Drosophila melanogaster 3L BAC RP98-10L1 (Roswell... 42 0.90
24gb|AC009383.8| Drosophila melanogaster 3L BAC RP98-31C3 (Roswell... 42 0.90
25gb|AE003514.4| Drosophila melanogaster chromosome 3L, section 71... 42 0.90
26gb|AY845858.1| Homo sapiens KCR1 (ALG10) mRNA, complete cds 40 3.6
27ref|XM_450615.1| Oryza sativa (japonica cultivar-group), mRNA 40 3.6
28ref|XM_473322.1| Oryza sativa (japonica cultivar-group), predic... 40 3.6
29gb|AY330945.1| Badis corycaeus isolate B276 cytochrome b (cytb) ... 40 3.6
30gb|AY330944.1| Badis corycaeus isolate B274 cytochrome b (cytb) ... 40 3.6
31gb|AY330943.1| Badis corycaeus isolate B272 cytochrome b (cytb) ... 40 3.6
32gb|AY330942.1| Badis corycaeus isolate B244 cytochrome b (cytb) ... 40 3.6
33gb|AC022342.3| Drosophila melanogaster clone BACR33N21, complete... 40 3.6
34ref|NM_001013620.2| Homo sapiens asparagine-linked glycosylation... 40 3.6
35ref|XM_655127.1| Aspergillus nidulans FGSC A4 hypothetical prote... 40 3.6
36ref|XM_849584.1| PREDICTED: Canis familiaris similar to sal-like... 40 3.6
37emb|CR450841.7| Zebrafish DNA sequence from clone DKEY-16N9 in l... 40 3.6
38ref|XM_798984.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 3.6
39gb|AY186602.1| Chlamydomonas reinhardtii long flagella (LF3) gen... 40 3.6
40emb|AL662998.4|OSJN00196 Oryza sativa genomic DNA, chromosome 4,... 40 3.6
41gb|AC117372.2| Homo sapiens 12 BAC RP11-266O15 (Roswell Park Can... 40 3.6
42emb|BX936428.10| Zebrafish DNA sequence from clone RP71-19F19 in... 40 3.6
43gb|AC087599.14| Oryza sativa chromosome 10 BAC OSJNBa0057L21 gen... 40 3.6
44gb|AY669318.1| Bactrocera dorsalis female-specific doublesex pro... 40 3.6
45gb|AY669317.1| Bactrocera dorsalis male-specific double sex prot... 40 3.6
46gb|CP000249.1| Frankia sp. CcI3, complete genome 40 3.6
47gb|AY395708.1| Leishmania donovani RAD51 protein mRNA, complete cds 40 3.6
48gb|AF062379.1|AF062379 Leishmania major strain Friedlin Rad51 ho... 40 3.6
49gb|AF116684.1|AF116684 Homo sapiens PRO2037 mRNA, complete cds 40 3.6
50emb|BX649392.6| Zebrafish DNA sequence from clone DKEY-84J12 in ... 40 3.6
51ref|XM_392670.2| PREDICTED: Apis mellifera similar to CG5284-PB,... 40 3.6
52dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.6
53dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.6
54dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.6
55dbj|AB194902.1| Chlamydomonas reinhardtii LSP1 gene for putative... 40 3.6
56gb|AC009953.4| Homo sapiens BAC clone RP11-193F16 from 2, comple... 40 3.6
57dbj|AP003633.3| Oryza sativa (japonica cultivar-group) genomic D... 40 3.6
58ref|XM_321825.2| Anopheles gambiae str. PEST ENSANGP00000020376 ... 40 3.6
59dbj|AK109552.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 3.6
60dbj|AK068512.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 3.6
61emb|BX664610.10| Zebrafish DNA sequence from clone DKEY-11N6 in ... 40 3.6
62dbj|AK063299.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 3.6
63gb|AE003495.4| Drosophila melanogaster chromosome X, section 47 ... 40 3.6
64dbj|AP000797.6| Homo sapiens genomic DNA, chromosome 11 clone:CM... 40 3.6
65dbj|AP002991.3| Homo sapiens genomic DNA, chromosome 11 clone:CT... 40 3.6
66gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 3.6
67emb|AL713863.7| Mouse DNA sequence from clone RP23-330I16 on chr... 40 3.6 
>ref|XM_482249.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2685

 Score = 95.6 bits (48), Expect = 7e-17
 Identities = 69/76 (90%)
 Strand = Plus / Minus

                                                                        
Query: 129  tgagcaaggctgggctcgctcttgatgctgtcgatccatctagcgctgatccgcaccctc 188
            ||||||||| | ||||||||| ||||||| ||||||||||| |||||||| || ||||||
Sbjct: 2651 tgagcaaggttaggctcgctcctgatgctctcgatccatctcgcgctgatacggaccctc 2592

                            
Query: 189  tcgaggctctgcttca 204
            ||||||||||||||||
Sbjct: 2591 tcgaggctctgcttca 2576
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 95.6 bits (48), Expect = 7e-17
 Identities = 69/76 (90%)
 Strand = Plus / Minus

                                                                            
Query: 129      tgagcaaggctgggctcgctcttgatgctgtcgatccatctagcgctgatccgcaccctc 188
                ||||||||| | ||||||||| ||||||| ||||||||||| |||||||| || ||||||
Sbjct: 19024048 tgagcaaggttaggctcgctcctgatgctctcgatccatctcgcgctgatacggaccctc 19023989

                                
Query: 189      tcgaggctctgcttca 204
                ||||||||||||||||
Sbjct: 19023988 tcgaggctctgcttca 19023973



 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 48/54 (88%)
 Strand = Plus / Minus

                                                                      
Query: 151      tgatgctgtcgatccatctagcgctgatccgcaccctctcgaggctctgcttca 204
                ||||||| ||||||||||| | ||||||||| |||||||| ||||| |||||||
Sbjct: 19068899 tgatgctctcgatccatctcgggctgatccggaccctctccaggctttgcttca 19068846
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>dbj|AP003947.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OJ1198_B10
          Length = 119768

 Score = 95.6 bits (48), Expect = 7e-17
 Identities = 69/76 (90%)
 Strand = Plus / Minus

                                                                          
Query: 129    tgagcaaggctgggctcgctcttgatgctgtcgatccatctagcgctgatccgcaccctc 188
              ||||||||| | ||||||||| ||||||| ||||||||||| |||||||| || ||||||
Sbjct: 108968 tgagcaaggttaggctcgctcctgatgctctcgatccatctcgcgctgatacggaccctc 108909

                              
Query: 189    tcgaggctctgcttca 204
              ||||||||||||||||
Sbjct: 108908 tcgaggctctgcttca 108893
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>dbj|AK120068.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002N11, full
            insert sequence
          Length = 2975

 Score = 95.6 bits (48), Expect = 7e-17
 Identities = 69/76 (90%)
 Strand = Plus / Minus

                                                                        
Query: 129  tgagcaaggctgggctcgctcttgatgctgtcgatccatctagcgctgatccgcaccctc 188
            ||||||||| | ||||||||| ||||||| ||||||||||| |||||||| || ||||||
Sbjct: 2693 tgagcaaggttaggctcgctcctgatgctctcgatccatctcgcgctgatacggaccctc 2634

                            
Query: 189  tcgaggctctgcttca 204
            ||||||||||||||||
Sbjct: 2633 tcgaggctctgcttca 2618
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>dbj|AP003904.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1051_A08
          Length = 137583

 Score = 95.6 bits (48), Expect = 7e-17
 Identities = 69/76 (90%)
 Strand = Plus / Minus

                                                                         
Query: 129   tgagcaaggctgggctcgctcttgatgctgtcgatccatctagcgctgatccgcaccctc 188
             ||||||||| | ||||||||| ||||||| ||||||||||| |||||||| || ||||||
Sbjct: 48835 tgagcaaggttaggctcgctcctgatgctctcgatccatctcgcgctgatacggaccctc 48776

                             
Query: 189   tcgaggctctgcttca 204
             ||||||||||||||||
Sbjct: 48775 tcgaggctctgcttca 48760



 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 48/54 (88%)
 Strand = Plus / Minus

                                                                   
Query: 151   tgatgctgtcgatccatctagcgctgatccgcaccctctcgaggctctgcttca 204
             ||||||| ||||||||||| | ||||||||| |||||||| ||||| |||||||
Sbjct: 93686 tgatgctctcgatccatctcgggctgatccggaccctctccaggctttgcttca 93633
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>dbj|AK105074.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-E10, full
           insert sequence
          Length = 356

 Score = 95.6 bits (48), Expect = 7e-17
 Identities = 69/76 (90%)
 Strand = Plus / Minus

                                                                       
Query: 129 tgagcaaggctgggctcgctcttgatgctgtcgatccatctagcgctgatccgcaccctc 188
           ||||||||| | ||||||||| ||||||| ||||||||||| |||||||| || ||||||
Sbjct: 93  tgagcaaggttaggctcgctcctgatgctctcgatccatctcgcgctgatacggaccctc 34

                           
Query: 189 tcgaggctctgcttca 204
           ||||||||||||||||
Sbjct: 33  tcgaggctctgcttca 18
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>ref|XM_482258.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 4017

 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 48/54 (88%)
 Strand = Plus / Minus

                                                                  
Query: 151  tgatgctgtcgatccatctagcgctgatccgcaccctctcgaggctctgcttca 204
            ||||||| ||||||||||| | ||||||||| |||||||| ||||| |||||||
Sbjct: 3779 tgatgctctcgatccatctcgggctgatccggaccctctccaggctttgcttca 3726
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>ref|XM_450614.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2984

 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                          
Query: 159  tcgatccatctagcgctgatccgcaccctctcgaggctctgcttca 204
            |||||||| || ||| ||||| ||||||||||||||||||||||||
Sbjct: 2553 tcgatccacctggcgttgatcagcaccctctcgaggctctgcttca 2508
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                              
Query: 159      tcgatccatctagcgctgatccgcaccctctcgaggctctgcttca 204
                |||||||| || ||| ||||| ||||||||||||||||||||||||
Sbjct: 11797077 tcgatccacctggcgttgatcagcaccctctcgaggctctgcttca 11797032



 Score = 40.1 bits (20), Expect = 3.6
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                                
Query: 171      gcgctgatccgcaccctctcgaggctctgctt 202
                ||||||||||||||  |||| |||||||||||
Sbjct: 11812197 gcgctgatccgcacattctccaggctctgctt 11812166
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>dbj|AP005572.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1506_A04
          Length = 114998

 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                           
Query: 159   tcgatccatctagcgctgatccgcaccctctcgaggctctgcttca 204
             |||||||| || ||| ||||| ||||||||||||||||||||||||
Sbjct: 39895 tcgatccacctggcgttgatcagcaccctctcgaggctctgcttca 39850



 Score = 40.1 bits (20), Expect = 3.6
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 171   gcgctgatccgcaccctctcgaggctctgctt 202
             ||||||||||||||  |||| |||||||||||
Sbjct: 55015 gcgctgatccgcacattctccaggctctgctt 54984
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>dbj|AK069520.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023022E24, full
            insert sequence
          Length = 4017

 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 48/54 (88%)
 Strand = Plus / Minus

                                                                  
Query: 151  tgatgctgtcgatccatctagcgctgatccgcaccctctcgaggctctgcttca 204
            ||||||| ||||||||||| | ||||||||| |||||||| ||||| |||||||
Sbjct: 3779 tgatgctctcgatccatctcgggctgatccggaccctctccaggctttgcttca 3726
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>dbj|AK068165.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013134N07, full
            insert sequence
          Length = 2985

 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                          
Query: 159  tcgatccatctagcgctgatccgcaccctctcgaggctctgcttca 204
            |||||||| || ||| ||||| ||||||||||||||||||||||||
Sbjct: 2554 tcgatccacctggcgttgatcagcaccctctcgaggctctgcttca 2509
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>gb|BC034057.1| Mus musculus elastin, mRNA (cDNA clone IMAGE:4038838), with
           apparent retained intron
          Length = 3114

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 99  aactcctgcagcagcagctgctgc 122
           ||||||||||||||||||||||||
Sbjct: 615 aactcctgcagcagcagctgctgc 638
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>gb|AC091250.2| Mus musculus strain C57BL6/J chromosome 5 clone RP23-315E2, complete
             sequence
          Length = 201395

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                     
Query: 99    aactcctgcagcagcagctgctgc 122
             ||||||||||||||||||||||||
Sbjct: 63372 aactcctgcagcagcagctgctgc 63349
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>ref|NM_007925.2| Mus musculus elastin (Eln), mRNA
          Length = 3782

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                    
Query: 99   aactcctgcagcagcagctgctgc 122
            ||||||||||||||||||||||||
Sbjct: 1079 aactcctgcagcagcagctgctgc 1102
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>dbj|AK080277.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched
            library, clone:A630021B08 product:elastin, full insert
            sequence
          Length = 3751

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                    
Query: 99   aactcctgcagcagcagctgctgc 122
            ||||||||||||||||||||||||
Sbjct: 1102 aactcctgcagcagcagctgctgc 1125
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>dbj|AK041860.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched
            library, clone:A630042I19 product:elastin, full insert
            sequence
          Length = 3782

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                    
Query: 99   aactcctgcagcagcagctgctgc 122
            ||||||||||||||||||||||||
Sbjct: 1079 aactcctgcagcagcagctgctgc 1102
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>gb|AF289665.1|AF289665 Mus musculus EIF4H gene, partial cds; LIMK1 gene, complete cds; and ELN
             gene, partial cds
          Length = 107257

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                     
Query: 99    aactcctgcagcagcagctgctgc 122
             ||||||||||||||||||||||||
Sbjct: 87472 aactcctgcagcagcagctgctgc 87449
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>gb|BC051649.1| Mus musculus elastin, mRNA (cDNA clone MGC:51697 IMAGE:5346255),
            complete cds
          Length = 3643

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                    
Query: 99   aactcctgcagcagcagctgctgc 122
            ||||||||||||||||||||||||
Sbjct: 1147 aactcctgcagcagcagctgctgc 1170
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>gb|U08210.1|MMU08210 Mus musculus tropoelastin mRNA, complete cds
          Length = 2651

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                    
Query: 99   aactcctgcagcagcagctgctgc 122
            ||||||||||||||||||||||||
Sbjct: 1065 aactcctgcagcagcagctgctgc 1088
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>ref|XM_663312.1| Cryptosporidium hominis TU502 hypothetical protein (Chro.20119)
           partial mRNA
          Length = 321

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 101 ctcctgcagcagcagctgctgc 122
           ||||||||||||||||||||||
Sbjct: 61  ctcctgcagcagcagctgctgc 40
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>ref|XM_545344.2| PREDICTED: Canis familiaris similar to glucose-fructose
           oxidoreductase domain containing 1 (LOC488222), mRNA
          Length = 1184

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 102 tcctgcagcagcagctgctgcgccg 126
           |||||||||||||||| ||||||||
Sbjct: 749 tcctgcagcagcagctcctgcgccg 725
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>gb|AC009384.7| Drosophila melanogaster 3L BAC RP98-10L1 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 168652

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 98     aaactcctgcagcagcagctgctgc 122
              ||||||||||||| |||||||||||
Sbjct: 145885 aaactcctgcagcggcagctgctgc 145861
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>gb|AC009383.8| Drosophila melanogaster 3L BAC RP98-31C3 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 179283

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 98    aaactcctgcagcagcagctgctgc 122
             ||||||||||||| |||||||||||
Sbjct: 21254 aaactcctgcagcggcagctgctgc 21230
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>gb|AE003514.4| Drosophila melanogaster chromosome 3L, section 71 of 83 of the complete
             sequence
          Length = 299903

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 98    aaactcctgcagcagcagctgctgc 122
             ||||||||||||| |||||||||||
Sbjct: 64271 aaactcctgcagcggcagctgctgc 64247
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>gb|AY845858.1| Homo sapiens KCR1 (ALG10) mRNA, complete cds
          Length = 1623

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 233  agtggcaaagaactgggaaa 252
            ||||||||||||||||||||
Sbjct: 1585 agtggcaaagaactgggaaa 1604
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>ref|XM_450615.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2622

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 171  gcgctgatccgcaccctctcgaggctctgctt 202
            ||||||||||||||  |||| |||||||||||
Sbjct: 2549 gcgctgatccgcacattctccaggctctgctt 2518
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>ref|XM_473322.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1131

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 104 ctgcagcagcagctgctgcgccgt 127
           ||||||| ||||||||||||||||
Sbjct: 912 ctgcagctgcagctgctgcgccgt 889
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>gb|AY330945.1| Badis corycaeus isolate B276 cytochrome b (cytb) gene, complete
           cds; and tRNA-Thr gene, partial sequence; mitochondrial
          Length = 1173

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 252 acctcagcagctttctcctc 271
           ||||||||||||||||||||
Sbjct: 175 acctcagcagctttctcctc 194
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>gb|AY330944.1| Badis corycaeus isolate B274 cytochrome b (cytb) gene, complete
           cds; and tRNA-Thr gene, partial sequence; mitochondrial
          Length = 1143

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 252 acctcagcagctttctcctc 271
           ||||||||||||||||||||
Sbjct: 175 acctcagcagctttctcctc 194
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>gb|AY330943.1| Badis corycaeus isolate B272 cytochrome b (cytb) gene, complete
           cds; and tRNA-Thr gene, partial sequence; mitochondrial
          Length = 1173

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 252 acctcagcagctttctcctc 271
           ||||||||||||||||||||
Sbjct: 175 acctcagcagctttctcctc 194
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>gb|AY330942.1| Badis corycaeus isolate B244 cytochrome b (cytb) gene, complete
           cds; and tRNA-Thr gene, partial sequence; mitochondrial
          Length = 1173

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 252 acctcagcagctttctcctc 271
           ||||||||||||||||||||
Sbjct: 175 acctcagcagctttctcctc 194
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>gb|AC022342.3| Drosophila melanogaster clone BACR33N21, complete sequence
          Length = 179839

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 107   cagcagcagctgctgcgccg 126
             ||||||||||||||||||||
Sbjct: 47889 cagcagcagctgctgcgccg 47870
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>ref|NM_001013620.2| Homo sapiens asparagine-linked glycosylation 10 homolog B (yeast,
            alpha-1,2-glucosyltransferase) (ALG10B), mRNA
          Length = 1763

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 233  agtggcaaagaactgggaaa 252
            ||||||||||||||||||||
Sbjct: 1725 agtggcaaagaactgggaaa 1744
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>ref|XM_655127.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN2615.2), mRNA
          Length = 2049

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 103 cctgcagcagcagctgctgc 122
           ||||||||||||||||||||
Sbjct: 418 cctgcagcagcagctgctgc 399
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>ref|XM_849584.1| PREDICTED: Canis familiaris similar to sal-like 4 (LOC483067), mRNA
          Length = 723

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 103 cctgcagcagcagctgctgc 122
           ||||||||||||||||||||
Sbjct: 87  cctgcagcagcagctgctgc 106
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>emb|CR450841.7| Zebrafish DNA sequence from clone DKEY-16N9 in linkage group 11, complete
              sequence
          Length = 263287

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 27     cagagcctttccaaaacatt 46
              ||||||||||||||||||||
Sbjct: 146376 cagagcctttccaaaacatt 146395
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>ref|XM_798984.1| Trypanosoma cruzi strain CL Brener hypothetical protein
            (Tc00.1047053509337.10) partial mRNA
          Length = 1890

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Minus

                                        
Query: 95   ttaaaactcct-gcagcagcagctgctg 121
            ||||||||||| ||||||||||||||||
Sbjct: 1172 ttaaaactcctcgcagcagcagctgctg 1145
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>gb|AY186602.1| Chlamydomonas reinhardtii long flagella (LF3) gene, complete cds
          Length = 7467

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 103  cctgcagcagcagctgctgc 122
            ||||||||||||||||||||
Sbjct: 1569 cctgcagcagcagctgctgc 1550
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>emb|AL662998.4|OSJN00196 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0020O11,
            complete sequence
          Length = 113677

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 104  ctgcagcagcagctgctgcgccgt 127
            ||||||| ||||||||||||||||
Sbjct: 5087 ctgcagctgcagctgctgcgccgt 5064
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>gb|AC117372.2| Homo sapiens 12 BAC RP11-266O15 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 165301

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 233    agtggcaaagaactgggaaa 252
              ||||||||||||||||||||
Sbjct: 138981 agtggcaaagaactgggaaa 139000
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>emb|BX936428.10| Zebrafish DNA sequence from clone RP71-19F19 in linkage group 5, complete
              sequence
          Length = 188618

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 46     ttattatgcagtcatggcac 65
              ||||||||||||||||||||
Sbjct: 154235 ttattatgcagtcatggcac 154254
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>gb|AC087599.14| Oryza sativa chromosome 10 BAC OSJNBa0057L21 genomic sequence, complete
             sequence
          Length = 183046

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 101   ctcctgcagcagcagctgctgcgc 124
             |||||||||| |||||||||||||
Sbjct: 67265 ctcctgcagctgcagctgctgcgc 67288
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>gb|AY669318.1| Bactrocera dorsalis female-specific doublesex protein (dsx-F) mRNA,
           complete cds
          Length = 1758

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 104 ctgcagcagcagctgctgcg 123
           ||||||||||||||||||||
Sbjct: 569 ctgcagcagcagctgctgcg 588
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>gb|AY669317.1| Bactrocera dorsalis male-specific double sex protein (dsx-M) mRNA,
           complete cds
          Length = 2250

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 104 ctgcagcagcagctgctgcg 123
           ||||||||||||||||||||
Sbjct: 569 ctgcagcagcagctgctgcg 588
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>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 106     gcagcagcagctgctgcgcc 125
               ||||||||||||||||||||
Sbjct: 2367462 gcagcagcagctgctgcgcc 2367481
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>gb|AY395708.1| Leishmania donovani RAD51 protein mRNA, complete cds
          Length = 1134

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 103 cctgcagcagcagctgctgc 122
           ||||||||||||||||||||
Sbjct: 730 cctgcagcagcagctgctgc 711
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>gb|AF062379.1|AF062379 Leishmania major strain Friedlin Rad51 homolog (RAD51) gene,
           complete cds
          Length = 1134

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 103 cctgcagcagcagctgctgc 122
           ||||||||||||||||||||
Sbjct: 730 cctgcagcagcagctgctgc 711
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>gb|AF116684.1|AF116684 Homo sapiens PRO2037 mRNA, complete cds
          Length = 1330

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 58  catggcacataatctcttct 77
           ||||||||||||||||||||
Sbjct: 873 catggcacataatctcttct 854
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>emb|BX649392.6| Zebrafish DNA sequence from clone DKEY-84J12 in linkage group 5, complete
              sequence
          Length = 197352

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 46     ttattatgcagtcatggcac 65
              ||||||||||||||||||||
Sbjct: 102844 ttattatgcagtcatggcac 102825
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>ref|XM_392670.2| PREDICTED: Apis mellifera similar to CG5284-PB, isoform B
            (LOC409144), mRNA
          Length = 2837

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 98   aaactcctgcagcagcagctgctg 121
            |||||||||||||||| |||||||
Sbjct: 1196 aaactcctgcagcagctgctgctg 1173
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 104      ctgcagcagcagctgctgcgccgt 127
                ||||||| ||||||||||||||||
Sbjct: 26778108 ctgcagctgcagctgctgcgccgt 26778131
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 101      ctcctgcagcagcagctgctgcgc 124
                |||||||||| |||||||||||||
Sbjct: 21941056 ctcctgcagctgcagctgctgcgc 21941033
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 106      gcagcagcagctgctgcgcc 125
                ||||||||||||||||||||
Sbjct: 27193302 gcagcagcagctgctgcgcc 27193321
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>dbj|AB194902.1| Chlamydomonas reinhardtii LSP1 gene for putative signal transducer
            for phototaxis, complete cds
          Length = 6480

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 104  ctgcagcagcagctgctgcg 123
            ||||||||||||||||||||
Sbjct: 1770 ctgcagcagcagctgctgcg 1789
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>gb|AC009953.4| Homo sapiens BAC clone RP11-193F16 from 2, complete sequence
          Length = 160810

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 58    catggcacataatctcttct 77
             ||||||||||||||||||||
Sbjct: 35073 catggcacataatctcttct 35092
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>dbj|AP003633.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0637D03
          Length = 180159

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 106   gcagcagcagctgctgcgcc 125
             ||||||||||||||||||||
Sbjct: 50318 gcagcagcagctgctgcgcc 50337
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>ref|XM_321825.2| Anopheles gambiae str. PEST ENSANGP00000020376
           (ENSANGG00000017887), partial mRNA
          Length = 3643

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 107 cagcagcagctgctgcgccg 126
           ||||||||||||||||||||
Sbjct: 691 cagcagcagctgctgcgccg 710
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>dbj|AK109552.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-124-A06, full
            insert sequence
          Length = 1418

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 104  ctgcagcagcagctgctgcgccgt 127
            ||||||| ||||||||||||||||
Sbjct: 1022 ctgcagctgcagctgctgcgccgt 999
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>dbj|AK068512.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013152F03, full
            insert sequence
          Length = 2232

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 171  gcgctgatccgcaccctctcgaggctctgctt 202
            ||||||||||||||  |||| |||||||||||
Sbjct: 1810 gcgctgatccgcacattctccaggctctgctt 1779
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>emb|BX664610.10| Zebrafish DNA sequence from clone DKEY-11N6 in linkage group 22,
             complete sequence
          Length = 206964

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 33    ctttccaaaacatttattat 52
             ||||||||||||||||||||
Sbjct: 31340 ctttccaaaacatttattat 31359
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>dbj|AK063299.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-113-F01, full
           insert sequence
          Length = 1763

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 101 ctcctgcagcagcagctgctgcgc 124
           |||||||||| |||||||||||||
Sbjct: 126 ctcctgcagctgcagctgctgcgc 149
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>gb|AE003495.4| Drosophila melanogaster chromosome X, section 47 of 74 of the complete
              sequence
          Length = 314743

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 107    cagcagcagctgctgcgccg 126
              ||||||||||||||||||||
Sbjct: 194266 cagcagcagctgctgcgccg 194247
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>dbj|AP000797.6| Homo sapiens genomic DNA, chromosome 11 clone:CMB9-36B5, complete
             sequence
          Length = 148490

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 103   cctgcagcagcagctgctgc 122
             ||||||||||||||||||||
Sbjct: 53495 cctgcagcagcagctgctgc 53514
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>dbj|AP002991.3| Homo sapiens genomic DNA, chromosome 11 clone:CTC-774J1, complete
              sequence
          Length = 167901

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 103    cctgcagcagcagctgctgc 122
              ||||||||||||||||||||
Sbjct: 165481 cctgcagcagcagctgctgc 165500
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 101      ctcctgcagcagcagctgctgcgc 124
                |||||||||| |||||||||||||
Sbjct: 21952719 ctcctgcagctgcagctgctgcgc 21952696
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>emb|AL713863.7| Mouse DNA sequence from clone RP23-330I16 on chromosome X, complete
              sequence
          Length = 203422

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 103    cctgcagcagcagctgctgc 122
              ||||||||||||||||||||
Sbjct: 173760 cctgcagcagcagctgctgc 173741


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,818,205
Number of Sequences: 3902068
Number of extensions: 2818205
Number of successful extensions: 63698
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 66
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 63403
Number of HSP's gapped (non-prelim): 294
length of query: 274
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 252
effective length of database: 17,147,199,772
effective search space: 4321094342544
effective search space used: 4321094342544
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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