ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl54b08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|Z97054.1|HS339A18 Human DNA sequence from clone RP3-339A18 o... 44 0.083
2dbj|AB002310.2| Homo sapiens mRNA for KIAA0312 gene, partial cds 44 0.083
3gb|AC103808.2| Homo sapiens chromosome 18, clone RP11-94B19, com... 42 0.33
4gb|AC016689.4| Homo sapiens BAC clone RP11-81H20 from 2, complet... 42 0.33
5ref|XM_479072.1| Oryza sativa (japonica cultivar-group), mRNA 40 1.3
6gb|AF499727.1| Cucumis melo BAC clone PIT92-60K17, complete sequ... 40 1.3
7gb|AC118592.7| Mus musculus chromosome 7, clone RP24-463B5, comp... 40 1.3
8gb|AC093123.4| Papio anubis clone RP41-171O6, complete sequence 40 1.3
9gb|AC098723.3| Mus musculus BAC clone RP23-3D10 from 7, complete... 40 1.3
10emb|AL035258.10|HS1097P24 Human DNA sequence from clone RP5-1097... 40 1.3
11emb|CR382139.1| Debaryomyces hansenii chromosome G of strain CBS... 40 1.3
12emb|CR626863.4| Mouse DNA sequence from clone RP23-348H1 on chro... 40 1.3
13gb|AC114954.2| Homo sapiens chromosome 5 clone RP11-103A10, comp... 40 1.3
14gb|AE009951.2| Fusobacterium nucleatum subsp. nucleatum ATCC 255... 40 1.3
15gb|AC158401.5| Mus musculus chromosome 7, clone RP23-84N6, compl... 40 1.3
16dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 1.3
17dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 1.3
18gb|AC017070.9| Homo sapiens BAC clone RP11-409F2 from 2, complet... 40 1.3
19dbj|AP003314.3| Oryza sativa (japonica cultivar-group) genomic D... 40 1.3
20dbj|AP002866.1| Oryza sativa (japonica cultivar-group) genomic D... 40 1.3
21dbj|AP005809.4| Oryza sativa (japonica cultivar-group) genomic D... 40 1.3
22dbj|AP005807.3| Oryza sativa (japonica cultivar-group) genomic D... 40 1.3
23gb|CP000025.1| Campylobacter jejuni RM1221, complete genome 38 5.1
24gb|AE014849.1| Plasmodium falciparum 3D7 chromosome 12, section ... 38 5.1
25gb|AC134792.9| Mus musculus chromosome 3, clone RP24-458L6, comp... 38 5.1
26gb|AC182400.3| Pan troglodytes BAC clone CH251-86D19 from chromo... 38 5.1
27gb|BC116450.1| Homo sapiens cDNA clone IMAGE:7962011, containing... 38 5.1
28gb|AC126448.3| Mus musculus BAC clone RP23-359M2 from chromosome... 38 5.1
29ref|XM_706742.1| Candida albicans SC5314 hypothetical protein (C... 38 5.1
30ref|XM_706720.1| Candida albicans SC5314 hypothetical protein (C... 38 5.1
31ref|NM_018165.3| Homo sapiens polybromo 1 (PB1), transcript vari... 38 5.1
32ref|XM_980312.1| PREDICTED: Mus musculus polybromo 1, transcript... 38 5.1
33ref|XM_980453.1| PREDICTED: Mus musculus polybromo 1, transcript... 38 5.1
34ref|XM_980353.1| PREDICTED: Mus musculus polybromo 1, transcript... 38 5.1
35ref|XM_980420.1| PREDICTED: Mus musculus polybromo 1, transcript... 38 5.1
36ref|XM_980516.1| PREDICTED: Mus musculus polybromo 1, transcript... 38 5.1
37ref|XM_980691.1| PREDICTED: Mus musculus polybromo 1, transcript... 38 5.1
38ref|XM_980648.1| PREDICTED: Mus musculus polybromo 1, transcript... 38 5.1
39ref|XM_980547.1| PREDICTED: Mus musculus polybromo 1, transcript... 38 5.1
40ref|XM_980611.1| PREDICTED: Mus musculus polybromo 1, transcript... 38 5.1
41ref|XM_980578.1| PREDICTED: Mus musculus polybromo 1, transcript... 38 5.1
42ref|XM_980484.1| PREDICTED: Mus musculus polybromo 1, transcript... 38 5.1
43ref|XM_898473.2| PREDICTED: Mus musculus polybromo 1, transcript... 38 5.1
44ref|XM_982426.1| PREDICTED: Mus musculus polybromo 1, transcript... 38 5.1
45ref|XM_982332.1| PREDICTED: Mus musculus polybromo 1, transcript... 38 5.1
46ref|XM_982397.1| PREDICTED: Mus musculus polybromo 1, transcript... 38 5.1
47ref|XM_982539.1| PREDICTED: Mus musculus polybromo 1, transcript... 38 5.1
48ref|XM_982679.1| PREDICTED: Mus musculus polybromo 1, transcript... 38 5.1
49ref|XM_898533.2| PREDICTED: Mus musculus polybromo 1, transcript... 38 5.1
50ref|XM_898551.2| PREDICTED: Mus musculus polybromo 1, transcript... 38 5.1
51ref|XM_898555.2| PREDICTED: Mus musculus polybromo 1, transcript... 38 5.1
52ref|XM_889384.2| PREDICTED: Mus musculus polybromo 1, transcript... 38 5.1
53ref|XM_619217.3| PREDICTED: Mus musculus polybromo 1, transcript... 38 5.1
54ref|XM_921805.2| PREDICTED: Mus musculus polybromo 1, transcript... 38 5.1
55ref|XM_983908.1| PREDICTED: Mus musculus polybromo 1, transcript... 38 5.1
56ref|XM_983789.1| PREDICTED: Mus musculus polybromo 1, transcript... 38 5.1
57ref|XM_983870.1| PREDICTED: Mus musculus polybromo 1, transcript... 38 5.1
58ref|XM_983981.1| PREDICTED: Mus musculus polybromo 1, transcript... 38 5.1
59ref|XM_984143.1| PREDICTED: Mus musculus polybromo 1, transcript... 38 5.1
60ref|XM_921875.2| PREDICTED: Mus musculus polybromo 1, transcript... 38 5.1
61ref|XM_921896.2| PREDICTED: Mus musculus polybromo 1, transcript... 38 5.1
62ref|XM_921905.2| PREDICTED: Mus musculus polybromo 1, transcript... 38 5.1
63ref|XM_910948.2| PREDICTED: Mus musculus polybromo 1, transcript... 38 5.1
64ref|XM_921867.2| PREDICTED: Mus musculus polybromo 1, transcript... 38 5.1
65emb|CT010475.5| Mouse DNA sequence from clone RP23-386L14 on chr... 38 5.1
66gb|AC129183.3| Mus musculus BAC clone RP23-350M13 from chromosom... 38 5.1
67gb|AC015884.15| Homo sapiens chromosome 17, clone RP11-216P6, co... 38 5.1
68gb|AF225872.1| Homo sapiens polybromo-1 (PB1) mRNA, complete cds... 38 5.1
69gb|AF225871.1| Homo sapiens polybromo-1 (PB1) mRNA, complete cds... 38 5.1
70gb|AF225870.1| Homo sapiens polybromo-1 (PB1) mRNA, complete cds... 38 5.1
71gb|AF177387.1| Homo sapiens polybromo-1 (PB1) mRNA, complete cds... 38 5.1
72gb|AC122803.4| Mus musculus BAC clone RP23-292K9 from 17, comple... 38 5.1
73gb|BC041212.1| Xenopus laevis translocase of outer mitochondrial... 38 5.1
74gb|AC004543.2| Homo sapiens BAC clone CTB-17C20 from 7, complete... 38 5.1
75gb|AC110918.9| Mus musculus chromosome 5, clone RP23-189P23, com... 38 5.1
76ref|NM_018313.3| Homo sapiens polybromo 1 (PB1), transcript vari... 38 5.1
77ref|NM_181042.2| Homo sapiens polybromo 1 (PB1), transcript vari... 38 5.1
78gb|AC110557.10| Mus musculus chromosome 5, clone RP23-250P16, co... 38 5.1
79emb|CR391962.5| Zebrafish DNA sequence from clone CH211-215K15 i... 38 5.1
80gb|BC115011.1| Homo sapiens polybromo 1, mRNA (cDNA clone MGC:13... 38 5.1
81gb|BC115009.1| Homo sapiens polybromo 1, mRNA (cDNA clone MGC:13... 38 5.1
82emb|AL158218.11| Human DNA sequence from clone RP5-831K15 on chr... 38 5.1
83gb|AC112215.3| Homo sapiens chromosome 3 clone RP11-844E22, comp... 38 5.1
84gb|AC105934.3| Homo sapiens chromosome 3 clone RP11-620K19, comp... 38 5.1
85emb|CR759918.11| Zebrafish DNA sequence from clone CH211-278M11 ... 38 5.1
86gb|AC154872.10| Mus musculus chromosome 1, clone RP23-393C3, com... 38 5.1
87emb|AL929352.1|PFA929352 Plasmodium falciparum strain 3D7, chrom... 38 5.1
88emb|AL139078.2|CJ11168X5 Campylobacter jejuni subsp. jejuni NCTC... 38 5.1
89dbj|AK056541.1| Homo sapiens cDNA FLJ31979 fis, clone NT2RP70084... 38 5.1
90gb|BC029037.1| Mus musculus polybromo 1, mRNA (cDNA clone IMAGE:... 38 5.1
91gb|BC024438.1| Mus musculus polybromo 1, mRNA (cDNA clone IMAGE:... 38 5.1
92gb|AC091162.9| Homo sapiens chromosome 8, clone RP11-255E13, com... 38 5.1
93gb|AC104446.2| Homo sapiens chromosome 3 clone RP11-447A21, comp... 38 5.1
94gb|AC108081.2| Homo sapiens chromosome 16 clone CTC-661I16, comp... 38 5.1
95dbj|AK166588.1| Mus musculus 1 cell embryo 1 cell cDNA, RIKEN fu... 38 5.1
96dbj|AK165182.1| Mus musculus 12 days embryo whole body cDNA, RIK... 38 5.1
97gb|CP000123.1| Mycoplasma capricolum subsp. capricolum ATCC 2734... 38 5.1
98dbj|AK009582.1| Mus musculus adult male tongue cDNA, RIKEN full-... 38 5.1
99gb|AC154446.2| Mus musculus BAC clone RP24-181E7 from chromosome... 38 5.1
100gb|AC159191.2| Mus musculus BAC clone RP24-158G12 from chromosom... 38 5.1
101dbj|AK030781.1| Mus musculus 8 days embryo whole body cDNA, RIKE... 38 5.1
102dbj|AK030252.1| Mus musculus adult male testis cDNA, RIKEN full-... 38 5.1
103gb|AC068723.5|AC068723 Homo sapiens chromosome 15 clone RP11-126... 38 5.1
104gb|AC009090.12| Homo sapiens chromosome 16 clone RP11-407G23, co... 38 5.1
105gb|AC117389.5| Homo sapiens 3 BAC RP11-27H1 (Roswell Park Cancer... 38 5.1
106gb|AC104801.4| Homo sapiens BAC clone RP11-356J12 from 2, comple... 38 5.1
107gb|AF197569.1|AF197569 Homo sapiens BAF180 (BAF180) mRNA, comple... 38 5.1
108gb|AC010974.9| Homo sapiens BAC clone RP11-159N20 from 2, comple... 38 5.1
109ref|XM_240329.3| PREDICTED: Rattus norvegicus similar to polybro... 38 5.1
110gb|AC155995.2| Xenopus tropicalis clone ISB1-308H5, complete seq... 38 5.1
111gb|AC012443.8| Homo sapiens BAC clone RP11-17G11 from 2, complet... 38 5.1
112gb|AY281068.1| Homo sapiens polybromo-1D (PB1) mRNA, complete cds 38 5.1
113gb|AC117497.3| Homo sapiens 12 BAC RP11-422O21 (Roswell Park Can... 38 5.1
114dbj|AK066770.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 5.1
115emb|BX681416.9| Zebrafish DNA sequence from clone CH211-45M15 in... 38 5.1
116gb|AC154727.2| Mus musculus BAC clone RP24-375I15 from 14, compl... 38 5.1
117emb|CR388144.17| Zebrafish DNA sequence from clone DKEY-21I17 in... 38 5.1
118emb|AJ297551.1|HSA297551 Homo sapiens partial PIK3CB gene for ph... 38 5.1
119dbj|AP001686.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 38 5.1
120dbj|AP000623.6| Homo sapiens genomic DNA, chromosome 11 clone:CM... 38 5.1
121gb|U40411.1| Caenorhabditis elegans cosmid B0403, complete sequence 38 5.1
122gb|M64292.1|MUSTIS21 Mouse TIS21 gene, complete cds 38 5.1
123dbj|AP001255.1| Homo sapiens genomic DNA, chromosome 21q21.1-q21... 38 5.1 
>emb|Z97054.1|HS339A18 Human DNA sequence from clone RP3-339A18 on chromosome Xp11.1-11.4
              Contains the 5' end of the SMC1L1 gene for SMC1 structural
              maintenance of chromosomes 1-like 1 (yeast), a novel RIB43A
              domain containing protein (FLJ32783), the HADH2 gene for
              hydroxyacyl-Coenzyme A dehydrogenase type II, a novel
              pseudogene (FLJ20516), the 3' end of the gene for upstream
              regulatory element binding protein 1 (UREB1), a novel gene
              and three CpG islands, complete sequence
          Length = 132805

 Score = 44.1 bits (22), Expect = 0.083
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 47     tccagccttcaaagaaaaaata 68
              ||||||||||||||||||||||
Sbjct: 128355 tccagccttcaaagaaaaaata 128334
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>dbj|AB002310.2| Homo sapiens mRNA for KIAA0312 gene, partial cds
          Length = 10790

 Score = 44.1 bits (22), Expect = 0.083
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 47    tccagccttcaaagaaaaaata 68
             ||||||||||||||||||||||
Sbjct: 10735 tccagccttcaaagaaaaaata 10756
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>gb|AC103808.2| Homo sapiens chromosome 18, clone RP11-94B19, complete sequence
          Length = 152722

 Score = 42.1 bits (21), Expect = 0.33
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 54    ttcaaagaaaaaatacaaagg 74
             |||||||||||||||||||||
Sbjct: 50957 ttcaaagaaaaaatacaaagg 50937
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>gb|AC016689.4| Homo sapiens BAC clone RP11-81H20 from 2, complete sequence
          Length = 134841

 Score = 42.1 bits (21), Expect = 0.33
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 57    aaagaaaaaatacaaagggtt 77
             |||||||||||||||||||||
Sbjct: 79977 aaagaaaaaatacaaagggtt 79957
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>ref|XM_479072.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3136

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 20   aggaataattatatttcttctata 43
            ||||||| ||||||||||||||||
Sbjct: 3135 aggaatatttatatttcttctata 3112
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>gb|AF499727.1| Cucumis melo BAC clone PIT92-60K17, complete sequence
          Length = 116877

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 43    ataatccagccttcaaagaaaaaa 66
             |||||||| |||||||||||||||
Sbjct: 67602 ataatccatccttcaaagaaaaaa 67579
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>gb|AC118592.7| Mus musculus chromosome 7, clone RP24-463B5, complete sequence
          Length = 134114

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 55    tcaaagaaaaaatacaaagg 74
             ||||||||||||||||||||
Sbjct: 82659 tcaaagaaaaaatacaaagg 82678
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>gb|AC093123.4| Papio anubis clone RP41-171O6, complete sequence
          Length = 172369

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 5      ggaaaccagagttccaggaa 24
              ||||||||||||||||||||
Sbjct: 105015 ggaaaccagagttccaggaa 104996
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>gb|AC098723.3| Mus musculus BAC clone RP23-3D10 from 7, complete sequence
          Length = 227968

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 55    tcaaagaaaaaatacaaagg 74
             ||||||||||||||||||||
Sbjct: 10400 tcaaagaaaaaatacaaagg 10381
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>emb|AL035258.10|HS1097P24 Human DNA sequence from clone RP5-1097P24 on chromosome 20p11.21-12.3
            Contains a putative novel gene, ESTs, STSs and GSSs,
            complete sequence
          Length = 133072

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 16   ttccaggaataattatattt 35
            ||||||||||||||||||||
Sbjct: 8862 ttccaggaataattatattt 8843
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>emb|CR382139.1| Debaryomyces hansenii chromosome G of strain CBS767 of Debaryomyces
               hansenii
          Length = 2051428

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 29      tatatttcttctatataatc 48
               ||||||||||||||||||||
Sbjct: 1519128 tatatttcttctatataatc 1519147
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>emb|CR626863.4| Mouse DNA sequence from clone RP23-348H1 on chromosome 2, complete
             sequence
          Length = 42053

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 10    ccagagttccaggaataatt 29
             ||||||||||||||||||||
Sbjct: 13169 ccagagttccaggaataatt 13188
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>gb|AC114954.2| Homo sapiens chromosome 5 clone RP11-103A10, complete sequence
          Length = 157980

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 37     ttctatataatccagccttc 56
              ||||||||||||||||||||
Sbjct: 125499 ttctatataatccagccttc 125480
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>gb|AE009951.2| Fusobacterium nucleatum subsp. nucleatum ATCC 25586, complete genome
          Length = 2174500

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 88     ggggctaaaattcctaaggg 107
              ||||||||||||||||||||
Sbjct: 480522 ggggctaaaattcctaaggg 480541
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>gb|AC158401.5| Mus musculus chromosome 7, clone RP23-84N6, complete sequence
          Length = 247769

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 23     aataattatatttcttctat 42
              ||||||||||||||||||||
Sbjct: 130376 aataattatatttcttctat 130395
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 20       aggaataattatatttcttctata 43
                ||||||| ||||||||||||||||
Sbjct: 24610747 aggaatatttatatttcttctata 24610770
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 24       ataattatatttcttctata 43
                ||||||||||||||||||||
Sbjct: 24297204 ataattatatttcttctata 24297185
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>gb|AC017070.9| Homo sapiens BAC clone RP11-409F2 from 2, complete sequence
          Length = 150942

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 20    aggaataattatatttcttc 39
             ||||||||||||||||||||
Sbjct: 85106 aggaataattatatttcttc 85125
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>dbj|AP003314.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0046B10
          Length = 142596

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 24     ataattatatttcttctata 43
              ||||||||||||||||||||
Sbjct: 121768 ataattatatttcttctata 121749
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>dbj|AP002866.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0410E01
          Length = 166753

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 24    ataattatatttcttctata 43
             ||||||||||||||||||||
Sbjct: 43108 ataattatatttcttctata 43089
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>dbj|AP005809.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBb0039M16
          Length = 133229

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 20    aggaataattatatttcttctata 43
             ||||||| ||||||||||||||||
Sbjct: 66814 aggaatatttatatttcttctata 66837
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>dbj|AP005807.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OSJNBb0018H10
          Length = 135879

 Score = 40.1 bits (20), Expect = 1.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 20     aggaataattatatttcttctata 43
              ||||||| ||||||||||||||||
Sbjct: 104041 aggaatatttatatttcttctata 104064
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>gb|CP000025.1| Campylobacter jejuni RM1221, complete genome
          Length = 1777831

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 54      ttcaaagaaaaaatacaaa 72
               |||||||||||||||||||
Sbjct: 1425963 ttcaaagaaaaaatacaaa 1425945



 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 54      ttcaaagaaaaaatacaaa 72
               |||||||||||||||||||
Sbjct: 1424134 ttcaaagaaaaaatacaaa 1424116
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>gb|AE014849.1| Plasmodium falciparum 3D7 chromosome 12, section 6 of 9 of the complete
              sequence
          Length = 250421

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 20     aggaataattatatttctt 38
              |||||||||||||||||||
Sbjct: 145371 aggaataattatatttctt 145389
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>gb|AC134792.9| Mus musculus chromosome 3, clone RP24-458L6, complete sequence
          Length = 166417

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 57    aaagaaaaaatacaaaggg 75
             |||||||||||||||||||
Sbjct: 67637 aaagaaaaaatacaaaggg 67619
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>gb|AC182400.3| Pan troglodytes BAC clone CH251-86D19 from chromosome 8, complete
              sequence
          Length = 150420

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 60     gaaaaaatacaaagggtta 78
              |||||||||||||||||||
Sbjct: 142049 gaaaaaatacaaagggtta 142031
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>gb|BC116450.1| Homo sapiens cDNA clone IMAGE:7962011, containing frame-shift errors
          Length = 4989

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 51   gccttcaaagaaaaaatac 69
            |||||||||||||||||||
Sbjct: 1251 gccttcaaagaaaaaatac 1269
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>gb|AC126448.3| Mus musculus BAC clone RP23-359M2 from chromosome 17, complete sequence
          Length = 207537

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 26     aattatatttcttctatat 44
              |||||||||||||||||||
Sbjct: 195219 aattatatttcttctatat 195201
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>ref|XM_706742.1| Candida albicans SC5314 hypothetical protein (CaO19.27), mRNA
          Length = 1182

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 49  cagccttcaaagaaaaaat 67
           |||||||||||||||||||
Sbjct: 592 cagccttcaaagaaaaaat 610
to top
>ref|XM_706720.1| Candida albicans SC5314 hypothetical protein (CaO19.7698), mRNA
          Length = 1182

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 49  cagccttcaaagaaaaaat 67
           |||||||||||||||||||
Sbjct: 592 cagccttcaaagaaaaaat 610
to top
>ref|NM_018165.3| Homo sapiens polybromo 1 (PB1), transcript variant 1, mRNA
          Length = 7508

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 51   gccttcaaagaaaaaatac 69
            |||||||||||||||||||
Sbjct: 1140 gccttcaaagaaaaaatac 1158
to top
>ref|XM_980312.1| PREDICTED: Mus musculus polybromo 1, transcript variant 1 (Pb1), mRNA
          Length = 4113

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 51   gccttcaaagaaaaaatac 69
            |||||||||||||||||||
Sbjct: 1448 gccttcaaagaaaaaatac 1466
to top
>ref|XM_980453.1| PREDICTED: Mus musculus polybromo 1, transcript variant 5 (Pb1), mRNA
          Length = 7654

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 51   gccttcaaagaaaaaatac 69
            |||||||||||||||||||
Sbjct: 1448 gccttcaaagaaaaaatac 1466
to top
>ref|XM_980353.1| PREDICTED: Mus musculus polybromo 1, transcript variant 2 (Pb1), mRNA
          Length = 7750

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 51   gccttcaaagaaaaaatac 69
            |||||||||||||||||||
Sbjct: 1544 gccttcaaagaaaaaatac 1562
to top
>ref|XM_980420.1| PREDICTED: Mus musculus polybromo 1, transcript variant 4 (Pb1), mRNA
          Length = 7750

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 51   gccttcaaagaaaaaatac 69
            |||||||||||||||||||
Sbjct: 1544 gccttcaaagaaaaaatac 1562
to top
>ref|XM_980516.1| PREDICTED: Mus musculus polybromo 1, transcript variant 7 (Pb1), mRNA
          Length = 7810

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 51   gccttcaaagaaaaaatac 69
            |||||||||||||||||||
Sbjct: 1448 gccttcaaagaaaaaatac 1466
to top
>ref|XM_980691.1| PREDICTED: Mus musculus polybromo 1, transcript variant 12 (Pb1),
            mRNA
          Length = 7975

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 51   gccttcaaagaaaaaatac 69
            |||||||||||||||||||
Sbjct: 1448 gccttcaaagaaaaaatac 1466
to top
>ref|XM_980648.1| PREDICTED: Mus musculus polybromo 1, transcript variant 11 (Pb1),
            mRNA
          Length = 8071

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 51   gccttcaaagaaaaaatac 69
            |||||||||||||||||||
Sbjct: 1544 gccttcaaagaaaaaatac 1562
to top
>ref|XM_980547.1| PREDICTED: Mus musculus polybromo 1, transcript variant 8 (Pb1), mRNA
          Length = 8020

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 51   gccttcaaagaaaaaatac 69
            |||||||||||||||||||
Sbjct: 1448 gccttcaaagaaaaaatac 1466
to top
>ref|XM_980611.1| PREDICTED: Mus musculus polybromo 1, transcript variant 10 (Pb1),
            mRNA
          Length = 7909

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 51   gccttcaaagaaaaaatac 69
            |||||||||||||||||||
Sbjct: 1382 gccttcaaagaaaaaatac 1400
to top
>ref|XM_980578.1| PREDICTED: Mus musculus polybromo 1, transcript variant 9 (Pb1), mRNA
          Length = 8069

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 51   gccttcaaagaaaaaatac 69
            |||||||||||||||||||
Sbjct: 1542 gccttcaaagaaaaaatac 1560
to top
>ref|XM_980484.1| PREDICTED: Mus musculus polybromo 1, transcript variant 6 (Pb1), mRNA
          Length = 8116

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 51   gccttcaaagaaaaaatac 69
            |||||||||||||||||||
Sbjct: 1544 gccttcaaagaaaaaatac 1562
to top
>ref|XM_898473.2| PREDICTED: Mus musculus polybromo 1, transcript variant 3 (Pb1), mRNA
          Length = 4113

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 51   gccttcaaagaaaaaatac 69
            |||||||||||||||||||
Sbjct: 1448 gccttcaaagaaaaaatac 1466
to top
>ref|XM_982426.1| PREDICTED: Mus musculus polybromo 1, transcript variant 18 (Pb1),
            mRNA
          Length = 7655

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 51   gccttcaaagaaaaaatac 69
            |||||||||||||||||||
Sbjct: 1448 gccttcaaagaaaaaatac 1466
to top
>ref|XM_982332.1| PREDICTED: Mus musculus polybromo 1, transcript variant 16 (Pb1),
            mRNA
          Length = 7751

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 51   gccttcaaagaaaaaatac 69
            |||||||||||||||||||
Sbjct: 1544 gccttcaaagaaaaaatac 1562
to top
>ref|XM_982397.1| PREDICTED: Mus musculus polybromo 1, transcript variant 17 (Pb1),
            mRNA
          Length = 7751

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 51   gccttcaaagaaaaaatac 69
            |||||||||||||||||||
Sbjct: 1544 gccttcaaagaaaaaatac 1562
to top
>ref|XM_982539.1| PREDICTED: Mus musculus polybromo 1, transcript variant 19 (Pb1),
            mRNA
          Length = 7811

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 51   gccttcaaagaaaaaatac 69
            |||||||||||||||||||
Sbjct: 1448 gccttcaaagaaaaaatac 1466
to top
>ref|XM_982679.1| PREDICTED: Mus musculus polybromo 1, transcript variant 20 (Pb1),
            mRNA
          Length = 7976

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 51   gccttcaaagaaaaaatac 69
            |||||||||||||||||||
Sbjct: 1448 gccttcaaagaaaaaatac 1466
to top
>ref|XM_898533.2| PREDICTED: Mus musculus polybromo 1, transcript variant 11 (Pb1),
            mRNA
          Length = 8021

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 51   gccttcaaagaaaaaatac 69
            |||||||||||||||||||
Sbjct: 1448 gccttcaaagaaaaaatac 1466
to top
>ref|XM_898551.2| PREDICTED: Mus musculus polybromo 1, transcript variant 14 (Pb1),
            mRNA
          Length = 7910

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 51   gccttcaaagaaaaaatac 69
            |||||||||||||||||||
Sbjct: 1382 gccttcaaagaaaaaatac 1400
to top
>ref|XM_898555.2| PREDICTED: Mus musculus polybromo 1, transcript variant 15 (Pb1),
            mRNA
          Length = 8070

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 51   gccttcaaagaaaaaatac 69
            |||||||||||||||||||
Sbjct: 1542 gccttcaaagaaaaaatac 1560
to top
>ref|XM_889384.2| PREDICTED: Mus musculus polybromo 1, transcript variant 2 (Pb1), mRNA
          Length = 8072

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 51   gccttcaaagaaaaaatac 69
            |||||||||||||||||||
Sbjct: 1544 gccttcaaagaaaaaatac 1562
to top
>ref|XM_619217.3| PREDICTED: Mus musculus polybromo 1, transcript variant 1 (Pb1), mRNA
          Length = 8117

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 51   gccttcaaagaaaaaatac 69
            |||||||||||||||||||
Sbjct: 1544 gccttcaaagaaaaaatac 1562
to top
>ref|XM_921805.2| PREDICTED: Mus musculus polybromo 1, transcript variant 17 (Pb1),
            mRNA
          Length = 4113

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 51   gccttcaaagaaaaaatac 69
            |||||||||||||||||||
Sbjct: 1448 gccttcaaagaaaaaatac 1466
to top
>ref|XM_983908.1| PREDICTED: Mus musculus polybromo 1, transcript variant 33 (Pb1),
            mRNA
          Length = 7655

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 51   gccttcaaagaaaaaatac 69
            |||||||||||||||||||
Sbjct: 1448 gccttcaaagaaaaaatac 1466
to top
>ref|XM_983789.1| PREDICTED: Mus musculus polybromo 1, transcript variant 31 (Pb1),
            mRNA
          Length = 7751

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 51   gccttcaaagaaaaaatac 69
            |||||||||||||||||||
Sbjct: 1544 gccttcaaagaaaaaatac 1562
to top
>ref|XM_983870.1| PREDICTED: Mus musculus polybromo 1, transcript variant 32 (Pb1),
            mRNA
          Length = 7751

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 51   gccttcaaagaaaaaatac 69
            |||||||||||||||||||
Sbjct: 1544 gccttcaaagaaaaaatac 1562
to top
>ref|XM_983981.1| PREDICTED: Mus musculus polybromo 1, transcript variant 34 (Pb1),
            mRNA
          Length = 7811

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 51   gccttcaaagaaaaaatac 69
            |||||||||||||||||||
Sbjct: 1448 gccttcaaagaaaaaatac 1466
to top
>ref|XM_984143.1| PREDICTED: Mus musculus polybromo 1, transcript variant 35 (Pb1),
            mRNA
          Length = 7976

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 51   gccttcaaagaaaaaatac 69
            |||||||||||||||||||
Sbjct: 1448 gccttcaaagaaaaaatac 1466
to top
>ref|XM_921875.2| PREDICTED: Mus musculus polybromo 1, transcript variant 26 (Pb1),
            mRNA
          Length = 8021

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 51   gccttcaaagaaaaaatac 69
            |||||||||||||||||||
Sbjct: 1448 gccttcaaagaaaaaatac 1466
to top
>ref|XM_921896.2| PREDICTED: Mus musculus polybromo 1, transcript variant 29 (Pb1),
            mRNA
          Length = 7910

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 51   gccttcaaagaaaaaatac 69
            |||||||||||||||||||
Sbjct: 1382 gccttcaaagaaaaaatac 1400
to top
>ref|XM_921905.2| PREDICTED: Mus musculus polybromo 1, transcript variant 30 (Pb1),
            mRNA
          Length = 8070

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 51   gccttcaaagaaaaaatac 69
            |||||||||||||||||||
Sbjct: 1542 gccttcaaagaaaaaatac 1560
to top
>ref|XM_910948.2| PREDICTED: Mus musculus polybromo 1, transcript variant 16 (Pb1),
            mRNA
          Length = 8072

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 51   gccttcaaagaaaaaatac 69
            |||||||||||||||||||
Sbjct: 1544 gccttcaaagaaaaaatac 1562
to top
>ref|XM_921867.2| PREDICTED: Mus musculus polybromo 1, transcript variant 25 (Pb1),
            mRNA
          Length = 8117

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 51   gccttcaaagaaaaaatac 69
            |||||||||||||||||||
Sbjct: 1544 gccttcaaagaaaaaatac 1562
to top
>emb|CT010475.5| Mouse DNA sequence from clone RP23-386L14 on chromosome 13, complete
              sequence
          Length = 202971

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 55     tcaaagaaaaaatacaaag 73
              |||||||||||||||||||
Sbjct: 147131 tcaaagaaaaaatacaaag 147149
to top
>gb|AC129183.3| Mus musculus BAC clone RP23-350M13 from chromosome 3, complete sequence
          Length = 201277

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 54     ttcaaagaaaaaatacaaa 72
              |||||||||||||||||||
Sbjct: 140102 ttcaaagaaaaaatacaaa 140120
to top
>gb|AC015884.15| Homo sapiens chromosome 17, clone RP11-216P6, complete sequence
          Length = 207661

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 3     agggaaaccagagttccag 21
             |||||||||||||||||||
Sbjct: 26003 agggaaaccagagttccag 25985
to top
>gb|AF225872.1| Homo sapiens polybromo-1 (PB1) mRNA, complete cds, alternatively
            spliced
          Length = 4825

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 51   gccttcaaagaaaaaatac 69
            |||||||||||||||||||
Sbjct: 1236 gccttcaaagaaaaaatac 1254
to top
>gb|AF225871.1| Homo sapiens polybromo-1 (PB1) mRNA, complete cds, alternatively
            spliced
          Length = 4766

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 51   gccttcaaagaaaaaatac 69
            |||||||||||||||||||
Sbjct: 1236 gccttcaaagaaaaaatac 1254
to top
>gb|AF225870.1| Homo sapiens polybromo-1 (PB1) mRNA, complete cds, alternatively
            spliced
          Length = 4885

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 51   gccttcaaagaaaaaatac 69
            |||||||||||||||||||
Sbjct: 1140 gccttcaaagaaaaaatac 1158
to top
>gb|AF177387.1| Homo sapiens polybromo-1 (PB1) mRNA, complete cds, alternatively
            spliced
          Length = 4981

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 51   gccttcaaagaaaaaatac 69
            |||||||||||||||||||
Sbjct: 1236 gccttcaaagaaaaaatac 1254
to top
>gb|AC122803.4| Mus musculus BAC clone RP23-292K9 from 17, complete sequence
          Length = 149990

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 26    aattatatttcttctatat 44
             |||||||||||||||||||
Sbjct: 45931 aattatatttcttctatat 45913
to top
>gb|BC041212.1| Xenopus laevis translocase of outer mitochondrial membrane 20
           homolog (yeast), mRNA (cDNA clone MGC:52684
           IMAGE:4682559), complete cds
          Length = 814

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 56  caaagaaaaaatacaaagggtta 78
           |||||||| ||||||||||||||
Sbjct: 639 caaagaaagaatacaaagggtta 661
to top
>gb|AC004543.2| Homo sapiens BAC clone CTB-17C20 from 7, complete sequence
          Length = 122121

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 54    ttcaaagaaaaaatacaaa 72
             |||||||||||||||||||
Sbjct: 40699 ttcaaagaaaaaatacaaa 40717
to top
>gb|AC110918.9| Mus musculus chromosome 5, clone RP23-189P23, complete sequence
          Length = 267946

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 38     tctatataatccagccttc 56
              |||||||||||||||||||
Sbjct: 124962 tctatataatccagccttc 124980
to top
>ref|NM_018313.3| Homo sapiens polybromo 1 (PB1), transcript variant 2, mRNA
          Length = 7545

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 51   gccttcaaagaaaaaatac 69
            |||||||||||||||||||
Sbjct: 1333 gccttcaaagaaaaaatac 1351
to top
>ref|NM_181042.2| Homo sapiens polybromo 1 (PB1), transcript variant 4, mRNA
          Length = 7448

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 51   gccttcaaagaaaaaatac 69
            |||||||||||||||||||
Sbjct: 1236 gccttcaaagaaaaaatac 1254
to top
>gb|AC110557.10| Mus musculus chromosome 5, clone RP23-250P16, complete sequence
          Length = 221232

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 38     tctatataatccagccttc 56
              |||||||||||||||||||
Sbjct: 180874 tctatataatccagccttc 180892
to top
>emb|CR391962.5| Zebrafish DNA sequence from clone CH211-215K15 in linkage group 16,
              complete sequence
          Length = 144859

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 23     aataattatatttcttctatata 45
              |||||||||||||||| ||||||
Sbjct: 137193 aataattatatttcttttatata 137215
to top
>gb|BC115011.1| Homo sapiens polybromo 1, mRNA (cDNA clone MGC:131579 IMAGE:7962010),
            complete cds
          Length = 4996

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 51   gccttcaaagaaaaaatac 69
            |||||||||||||||||||
Sbjct: 1252 gccttcaaagaaaaaatac 1270
to top
>gb|BC115009.1| Homo sapiens polybromo 1, mRNA (cDNA clone MGC:131576 IMAGE:7962003),
            complete cds
          Length = 4402

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 51   gccttcaaagaaaaaatac 69
            |||||||||||||||||||
Sbjct: 1251 gccttcaaagaaaaaatac 1269
to top
>emb|AL158218.11| Human DNA sequence from clone RP5-831K15 on chromosome 1p31.1-31.3
             Contains a ribosomal protein L7 (RPL7) pseudogene,
             complete sequence
          Length = 103186

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 55    tcaaagaaaaaatacaaag 73
             |||||||||||||||||||
Sbjct: 95955 tcaaagaaaaaatacaaag 95973
to top
>gb|AC112215.3| Homo sapiens chromosome 3 clone RP11-844E22, complete sequence
          Length = 199310

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 51     gccttcaaagaaaaaatac 69
              |||||||||||||||||||
Sbjct: 184586 gccttcaaagaaaaaatac 184568
to top
>gb|AC105934.3| Homo sapiens chromosome 3 clone RP11-620K19, complete sequence
          Length = 217029

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 51     gccttcaaagaaaaaatac 69
              |||||||||||||||||||
Sbjct: 176222 gccttcaaagaaaaaatac 176204
to top
>emb|CR759918.11| Zebrafish DNA sequence from clone CH211-278M11 in linkage group 15,
              complete sequence
          Length = 160374

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 62     aaaaatacaaagggttaca 80
              |||||||||||||||||||
Sbjct: 148472 aaaaatacaaagggttaca 148454
to top
>gb|AC154872.10| Mus musculus chromosome 1, clone RP23-393C3, complete sequence
          Length = 193086

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 57     aaagaaaaaatacaaaggg 75
              |||||||||||||||||||
Sbjct: 173942 aaagaaaaaatacaaaggg 173960
to top
>emb|AL929352.1|PFA929352 Plasmodium falciparum strain 3D7, chromosome 5, segment 2/4
          Length = 313050

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 52     ccttcaaagaaaaaataca 70
              |||||||||||||||||||
Sbjct: 281246 ccttcaaagaaaaaataca 281264
to top
>emb|AL139078.2|CJ11168X5 Campylobacter jejuni subsp. jejuni NCTC 11168 complete genome; segment
             5/6
          Length = 263335

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 54    ttcaaagaaaaaatacaaa 72
             |||||||||||||||||||
Sbjct: 50973 ttcaaagaaaaaatacaaa 50955



 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 54    ttcaaagaaaaaatacaaa 72
             |||||||||||||||||||
Sbjct: 49144 ttcaaagaaaaaatacaaa 49126
to top
>dbj|AK056541.1| Homo sapiens cDNA FLJ31979 fis, clone NT2RP7008441, highly similar to
            Polybromo 1 protein
          Length = 3256

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 51   gccttcaaagaaaaaatac 69
            |||||||||||||||||||
Sbjct: 1065 gccttcaaagaaaaaatac 1083
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>gb|BC029037.1| Mus musculus polybromo 1, mRNA (cDNA clone IMAGE:4946106), containing
            frame-shift errors
          Length = 2848

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 51   gccttcaaagaaaaaatac 69
            |||||||||||||||||||
Sbjct: 1361 gccttcaaagaaaaaatac 1379
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>gb|BC024438.1| Mus musculus polybromo 1, mRNA (cDNA clone IMAGE:4973507)
          Length = 1941

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 51  gccttcaaagaaaaaatac 69
           |||||||||||||||||||
Sbjct: 400 gccttcaaagaaaaaatac 418
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>gb|AC091162.9| Homo sapiens chromosome 8, clone RP11-255E13, complete sequence
          Length = 149697

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 60    gaaaaaatacaaagggtta 78
             |||||||||||||||||||
Sbjct: 73701 gaaaaaatacaaagggtta 73719
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>gb|AC104446.2| Homo sapiens chromosome 3 clone RP11-447A21, complete sequence
          Length = 186734

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 51    gccttcaaagaaaaaatac 69
             |||||||||||||||||||
Sbjct: 87441 gccttcaaagaaaaaatac 87423
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>gb|AC108081.2| Homo sapiens chromosome 16 clone CTC-661I16, complete sequence
          Length = 100808

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 33   tttcttctatataatccag 51
            |||||||||||||||||||
Sbjct: 8453 tttcttctatataatccag 8471
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>dbj|AK166588.1| Mus musculus 1 cell embryo 1 cell cDNA, RIKEN full-length enriched
            library, clone:I0C0032E15 product:POLYBROMO-1 homolog
            (Fragment) homolog [Mus musculus], full insert sequence
          Length = 3140

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 51   gccttcaaagaaaaaatac 69
            |||||||||||||||||||
Sbjct: 1543 gccttcaaagaaaaaatac 1561
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>dbj|AK165182.1| Mus musculus 12 days embryo whole body cDNA, RIKEN full-length
            enriched library, clone:E970005H16 product:POLYBROMO-1
            homolog (Fragment) homolog [Mus musculus], full insert
            sequence
          Length = 3020

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 51   gccttcaaagaaaaaatac 69
            |||||||||||||||||||
Sbjct: 1546 gccttcaaagaaaaaatac 1564
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>gb|CP000123.1| Mycoplasma capricolum subsp. capricolum ATCC 27343, complete genome
          Length = 1010023

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 54     ttcaaagaaaaaatacaaa 72
              |||||||||||||||||||
Sbjct: 798869 ttcaaagaaaaaatacaaa 798851
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>dbj|AK009582.1| Mus musculus adult male tongue cDNA, RIKEN full-length enriched
           library, clone:2310032M22 product:POLYBROMO-1 homolog
           [Homo sapiens], full insert sequence
          Length = 828

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 51  gccttcaaagaaaaaatac 69
           |||||||||||||||||||
Sbjct: 525 gccttcaaagaaaaaatac 543
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>gb|AC154446.2| Mus musculus BAC clone RP24-181E7 from chromosome 14, complete sequence
          Length = 163771

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 51    gccttcaaagaaaaaatac 69
             |||||||||||||||||||
Sbjct: 14976 gccttcaaagaaaaaatac 14994
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>gb|AC159191.2| Mus musculus BAC clone RP24-158G12 from chromosome 13, complete
             sequence
          Length = 176738

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 55    tcaaagaaaaaatacaaag 73
             |||||||||||||||||||
Sbjct: 48181 tcaaagaaaaaatacaaag 48163
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>dbj|AK030781.1| Mus musculus 8 days embryo whole body cDNA, RIKEN full-length
            enriched library, clone:5730600B02 product:POLYBROMO-1
            homolog [Homo sapiens], full insert sequence
          Length = 3015

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 51   gccttcaaagaaaaaatac 69
            |||||||||||||||||||
Sbjct: 1492 gccttcaaagaaaaaatac 1510
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>dbj|AK030252.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
           library, clone:4933432C20 product:POLYBROMO-1 homolog
           [Homo sapiens], full insert sequence
          Length = 2529

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 51  gccttcaaagaaaaaatac 69
           |||||||||||||||||||
Sbjct: 380 gccttcaaagaaaaaatac 398
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>gb|AC068723.5|AC068723 Homo sapiens chromosome 15 clone RP11-126E3 map 15q21.3, complete
              sequence
          Length = 166151

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 34     ttcttctatataatccagc 52
              |||||||||||||||||||
Sbjct: 120163 ttcttctatataatccagc 120145
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>gb|AC009090.12| Homo sapiens chromosome 16 clone RP11-407G23, complete sequence
          Length = 198253

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 33    tttcttctatataatccag 51
             |||||||||||||||||||
Sbjct: 14438 tttcttctatataatccag 14420
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>gb|AC117389.5| Homo sapiens 3 BAC RP11-27H1 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 111104

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 29    tatatttcttctatataat 47
             |||||||||||||||||||
Sbjct: 62814 tatatttcttctatataat 62796
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>gb|AC104801.4| Homo sapiens BAC clone RP11-356J12 from 2, complete sequence
          Length = 132644

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 25    taattatatttcttctata 43
             |||||||||||||||||||
Sbjct: 39031 taattatatttcttctata 39013
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>gb|AF197569.1|AF197569 Homo sapiens BAF180 (BAF180) mRNA, complete cds
          Length = 5070

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 51   gccttcaaagaaaaaatac 69
            |||||||||||||||||||
Sbjct: 1329 gccttcaaagaaaaaatac 1347
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>gb|AC010974.9| Homo sapiens BAC clone RP11-159N20 from 2, complete sequence
          Length = 147131

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 16     ttccaggaataattatatttctt 38
              |||||| ||||||||||||||||
Sbjct: 128332 ttccagaaataattatatttctt 128310
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>ref|XM_240329.3| PREDICTED: Rattus norvegicus similar to polybromo-1 (LOC306254), mRNA
          Length = 5220

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 51   gccttcaaagaaaaaatac 69
            |||||||||||||||||||
Sbjct: 1330 gccttcaaagaaaaaatac 1348
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>gb|AC155995.2| Xenopus tropicalis clone ISB1-308H5, complete sequence
          Length = 92686

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 24    ataattatatttcttctat 42
             |||||||||||||||||||
Sbjct: 79512 ataattatatttcttctat 79530
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>gb|AC012443.8| Homo sapiens BAC clone RP11-17G11 from 2, complete sequence
          Length = 153610

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 16   ttccaggaataattatatt 34
            |||||||||||||||||||
Sbjct: 2222 ttccaggaataattatatt 2204
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>gb|AY281068.1| Homo sapiens polybromo-1D (PB1) mRNA, complete cds
          Length = 5145

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 51   gccttcaaagaaaaaatac 69
            |||||||||||||||||||
Sbjct: 1235 gccttcaaagaaaaaatac 1253
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>gb|AC117497.3| Homo sapiens 12 BAC RP11-422O21 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 87243

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 54    ttcaaagaaaaaatacaaa 72
             |||||||||||||||||||
Sbjct: 21762 ttcaaagaaaaaatacaaa 21744
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>dbj|AK066770.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013088M15, full
            insert sequence
          Length = 3135

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 21   ggaataattatatttcttctata 43
            |||||| ||||||||||||||||
Sbjct: 3133 ggaatatttatatttcttctata 3111
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>emb|BX681416.9| Zebrafish DNA sequence from clone CH211-45M15 in linkage group 20,
              complete sequence
          Length = 188412

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 56     caaagaaaaaatacaaagg 74
              |||||||||||||||||||
Sbjct: 137888 caaagaaaaaatacaaagg 137906
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>gb|AC154727.2| Mus musculus BAC clone RP24-375I15 from 14, complete sequence
          Length = 189907

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 51     gccttcaaagaaaaaatac 69
              |||||||||||||||||||
Sbjct: 160897 gccttcaaagaaaaaatac 160915
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>emb|CR388144.17| Zebrafish DNA sequence from clone DKEY-21I17 in linkage group 14,
             complete sequence
          Length = 211706

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 23    aataattatatttcttcta 41
             |||||||||||||||||||
Sbjct: 88027 aataattatatttcttcta 88045
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>emb|AJ297551.1|HSA297551 Homo sapiens partial PIK3CB gene for phosphatidylinositol 3-kinase
            catalytic subunit p110beta, exons 4-6
          Length = 10401

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 29   tatatttcttctatataat 47
            |||||||||||||||||||
Sbjct: 6621 tatatttcttctatataat 6603
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>dbj|AP001686.1| Homo sapiens genomic DNA, chromosome 21q, section 30/105
          Length = 340000

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 17     tccaggaataattatattt 35
              |||||||||||||||||||
Sbjct: 255514 tccaggaataattatattt 255496
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>dbj|AP000623.6| Homo sapiens genomic DNA, chromosome 11 clone:CMB9-71P3, complete
             sequence
          Length = 121627

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 23    aataattatatttcttctatata 45
             |||||||||||||||| ||||||
Sbjct: 53806 aataattatatttcttttatata 53828
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>gb|U40411.1| Caenorhabditis elegans cosmid B0403, complete sequence
          Length = 42810

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 20    aggaataattatatttctt 38
             |||||||||||||||||||
Sbjct: 14219 aggaataattatatttctt 14237
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>gb|M64292.1|MUSTIS21 Mouse TIS21 gene, complete cds
          Length = 4886

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 57   aaagaaaaaatacaaaggg 75
            |||||||||||||||||||
Sbjct: 1798 aaagaaaaaatacaaaggg 1780
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>dbj|AP001255.1| Homo sapiens genomic DNA, chromosome 21q21.1-q21.2, clone:B725F18,
             LL56-APP region, complete sequence
          Length = 83921

 Score = 38.2 bits (19), Expect = 5.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 17    tccaggaataattatattt 35
             |||||||||||||||||||
Sbjct: 25392 tccaggaataattatattt 25374


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,053,752
Number of Sequences: 3902068
Number of extensions: 3053752
Number of successful extensions: 163583
Number of sequences better than 10.0: 123
Number of HSP's better than 10.0 without gapping: 123
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 163047
Number of HSP's gapped (non-prelim): 536
length of query: 113
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 92
effective length of database: 17,151,101,840
effective search space: 1577901369280
effective search space used: 1577901369280
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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