>emb|AL035686.15|HS965N20 Human DNA sequence from clone RP5-965N20 on chromosome 20q13.13-13.2
             Contains ESTs, STSs and GSSs, complete sequence
          Length = 127197

 Score = 42.1 bits (21), Expect = 0.62
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 66    tcaaacacacaaggcaccttc 86
             |||||||||||||||||||||
Sbjct: 86152 tcaaacacacaaggcaccttc 86132

>emb|BX511202.3|RN217N9 Rattus norvegicus chromosome 1 BAC RP32-217N9, complete sequence
          Length = 178012

 Score = 42.1 bits (21), Expect = 0.62
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 160   aacctcaccttagagagatgc 180
             |||||||||||||||||||||
Sbjct: 75835 aacctcaccttagagagatgc 75855

>gb|AC109474.2| Homo sapiens chromosome 5 clone RP11-414I19, complete sequence
          Length = 180650

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 51     atatcttttattacatcaaa 70
              ||||||||||||||||||||
Sbjct: 164093 atatcttttattacatcaaa 164074

>ref|NM_069272.2| Caenorhabditis elegans WaRThog (hedgehog-like family) family member
           (wrt-3) (wrt-3) mRNA, complete cds
          Length = 711

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 51  atatcttttattacatcaaa 70
           ||||||||||||||||||||
Sbjct: 442 atatcttttattacatcaaa 423

>gb|AF139522.1|AF139522 Caenorhabditis elegans warthog protein WRT-3 (wrt-3) mRNA, partial
           cds
          Length = 404

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 51  atatcttttattacatcaaa 70
           ||||||||||||||||||||
Sbjct: 401 atatcttttattacatcaaa 382

>emb|Z68342.1|CEF38E11 Caenorhabditis elegans Cosmid F38E11, complete sequence
          Length = 38461

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 51    atatcttttattacatcaaa 70
             ||||||||||||||||||||
Sbjct: 33239 atatcttttattacatcaaa 33258

>ref|NM_111912.1| Arabidopsis thaliana unknown protein AT3G10750 mRNA, complete cds
          Length = 900

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 72  acacaaggcaccttcagta 90
           |||||||||||||||||||
Sbjct: 117 acacaaggcaccttcagta 135

>emb|BX950198.13| Zebrafish DNA sequence from clone CH211-214G3 in linkage group 24,
             complete sequence
          Length = 196308

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 27    acatcacatacagtacttt 45
             |||||||||||||||||||
Sbjct: 70102 acatcacatacagtacttt 70084

>emb|BX936312.12| Zebrafish DNA sequence from clone DKEY-204O5 in linkage group 7,
            complete sequence
          Length = 158510

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 92   aaatttacatgtgacaacagagc 114
            |||||||||||||||| ||||||
Sbjct: 2058 aaatttacatgtgacagcagagc 2080

>gb|AC011708.8|ATAC011708 Arabidopsis thaliana chromosome III BAC T7M13 genomic sequence,
             complete sequence
          Length = 80379

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 72    acacaaggcaccttcagta 90
             |||||||||||||||||||
Sbjct: 49365 acacaaggcaccttcagta 49347

>gb|AC090469.9| Homo sapiens chromosome 11, clone RP11-734J23, complete sequence
          Length = 215308

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 52     tatcttttattacatcaaa 70
              |||||||||||||||||||
Sbjct: 151170 tatcttttattacatcaaa 151188

>gb|AC161824.6| Mus musculus 6 BAC RP23-62E9 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 263206

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 85     tcagtaaaaatttacatgt 103
              |||||||||||||||||||
Sbjct: 169377 tcagtaaaaatttacatgt 169395

>gb|AC147006.18| Medicago truncatula clone mth2-62m1, complete sequence
          Length = 126833

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 59     tattacatcaaacacacaa 77
              |||||||||||||||||||
Sbjct: 116365 tattacatcaaacacacaa 116347

>emb|AL513533.15| Human DNA sequence from clone RP11-341B24 on chromosome 10 Contains the
              3' end of the LIPA gene for lipase A lysosomal acid
              cholesterol esterase (Wolman disease), a novel zinc finger
              pseudogene and the CH25 gene for cholesterol
              25-hydroxylase, complete sequence
          Length = 148151

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 54     tcttttattacatcaaaca 72
              |||||||||||||||||||
Sbjct: 141972 tcttttattacatcaaaca 141954

>emb|AL390716.27| Human DNA sequence from clone RP11-314P12 on chromosome 10 Contains the
             PPYR1 gene for Pancreatic polypeptide receptor 1, a novel
             gene, part of a novel gene  and a heterogeneous nuclear
             ribonucleoprotein A1 (HNRPA1) pseudogene, complete
             sequence
          Length = 75031

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 83    cttcagtaaaaatttacat 101
             |||||||||||||||||||
Sbjct: 58392 cttcagtaaaaatttacat 58374

>emb|AL356413.11| Human DNA sequence from clone RP11-498F10 on chromosome 13, complete
             sequence
          Length = 146278

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 52    tatcttttattacatcaaa 70
             |||||||||||||||||||
Sbjct: 96628 tatcttttattacatcaaa 96646

>emb|AL356318.7| Human DNA sequence from clone RP11-161E22 on chromosome 9 Contains part
             of the TRPM3 gene for transient receptor potential cation
             channel subfamily M, member 3 (MLSN2, LTRPC3, FLJ11726)
             and a pseudogene similar to part of CDC91 cell division
             cycle 91-like 1 (S. cerevisiae) (CDC91L1), complete
             sequence
          Length = 141339

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 54    tcttttattacatcaaaca 72
             |||||||||||||||||||
Sbjct: 64757 tcttttattacatcaaaca 64775

>gb|AY230440.1| Gibberella moniliformis kinesin (KLP4) gene, complete cds
          Length = 2238

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 45   tcaccgatatcttttattacatc 67
            ||||||||||||||| |||||||
Sbjct: 1007 tcaccgatatcttttcttacatc 1029

>gb|AC079071.9| Homo sapiens chromosome 8, clone RP11-43G18, complete sequence
          Length = 157811

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 54    tcttttattacatcaaaca 72
             |||||||||||||||||||
Sbjct: 78214 tcttttattacatcaaaca 78196

>gb|AC016482.5| Homo sapiens chromosome 17, clone RP11-19G24, complete sequence
          Length = 145909

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 30     tcacatacagtactttcac 48
              |||||||||||||||||||
Sbjct: 145251 tcacatacagtactttcac 145269

>gb|AC087330.6| Mus Musculus Strain C57BL6/J chromosome 5 BAC, RP23-3M10, complete
             sequence
          Length = 206093

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 125   gggcatgcttcatcagccc 143
             |||||||||||||||||||
Sbjct: 69894 gggcatgcttcatcagccc 69876

>emb|BX572621.7| Zebrafish DNA sequence from clone DKEY-34B22 in linkage group 5, complete
              sequence
          Length = 196336

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 72     acacaaggcaccttcagta 90
              |||||||||||||||||||
Sbjct: 122115 acacaaggcaccttcagta 122097

>gb|AC068400.10| Homo sapiens chromosome 17, clone RP11-378E13, complete sequence
          Length = 205588

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 30     tcacatacagtactttcac 48
              |||||||||||||||||||
Sbjct: 174212 tcacatacagtactttcac 174194

>gb|AC153598.4| Mus musculus 6 BAC RP23-167L15 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 209035

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 85     tcagtaaaaatttacatgt 103
              |||||||||||||||||||
Sbjct: 155425 tcagtaaaaatttacatgt 155407

>gb|AC007900.5|AC007900 Homo sapiens chromosome 17, clone CTB-125F20, complete sequence
          Length = 74853

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 30    tcacatacagtactttcac 48
             |||||||||||||||||||
Sbjct: 18672 tcacatacagtactttcac 18690

>emb|BX537168.4| Zebrafish DNA sequence from clone DKEY-105O6 in linkage group 4, complete
              sequence
          Length = 200744

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 50     gatatcttttattacatcaaaca 72
              ||||||||| |||||||||||||
Sbjct: 139094 gatatctttgattacatcaaaca 139116

>gb|AE015927.1| Clostridium tetani E88, complete genome
          Length = 2799251

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 51      atatcttttattacatcaa 69
               |||||||||||||||||||
Sbjct: 1459449 atatcttttattacatcaa 1459467

>gb|AC164643.4| Mus musculus BAC clone RP23-254F23 from chromosome 7, complete sequence
          Length = 232098

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 52     tatcttttattacatcaaa 70
              |||||||||||||||||||
Sbjct: 120757 tatcttttattacatcaaa 120775


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,567,347
Number of Sequences: 3902068
Number of extensions: 1567347
Number of successful extensions: 101683
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 101590
Number of HSP's gapped (non-prelim): 93
length of query: 195
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 173
effective length of database: 17,147,199,772
effective search space: 2966465560556
effective search space used: 2966465560556
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)