>DEF2_COXBU (Q83AK6) Peptide deformylase 2 (EC 3.5.1.88) (PDF 2) (Polypeptide|
           deformylase 2)
          Length = 209

 Score = 31.6 bits (70), Expect = 0.52
 Identities = 13/42 (30%), Positives = 22/42 (52%)
 Frame = -2

Query: 129 IEGCSSIYARFGIGSKEIHLLLSVWVYM*PISAREN*MLQYH 4
           IEGC S+  + G+  + +H+ L+ W+Y     A      +YH
Sbjct: 98  IEGCLSVPGKVGVVERYVHVELTAWLYHSDTEALSKIKREYH 139

>S4A7_HUMAN (Q9Y6M7) Sodium bicarbonate cotransporter 3 (Sodium bicarbonate|
           cotransporter 2) (Sodium bicarbonate cotransporter 2b)
           (Bicarbonate transporter) (Solute carrier family 4
           member 7)
          Length = 1214

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +3

Query: 195 HIPHISLTELDERCWRHEISLRW 263
           HIPH   TE+DE C+R      W
Sbjct: 107 HIPHDLFTEMDELCYRDGEEYEW 129

>S4A7_RAT (Q9R1N3) Sodium bicarbonate cotransporter 3 (Electroneutral sodium|
           bicarbonate cotransporter 1) (NBC-like protein) (Solute
           carrier family 4 member 7)
          Length = 1218

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +3

Query: 195 HIPHISLTELDERCWRHEISLRW 263
           HIPH   TE+DE C+R      W
Sbjct: 112 HIPHDLFTEMDELCYRDGEEYEW 134

>S4A7_MOUSE (Q8BTY2) Sodium bicarbonate cotransporter 3 (Solute carrier family|
           4 member 7)
          Length = 1034

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +3

Query: 195 HIPHISLTELDERCWRHEISLRW 263
           HIPH   TE+DE C+R      W
Sbjct: 112 HIPHDLFTEMDELCYRDGEEYEW 134

>SYGA_RICCN (Q92G10) Glycyl-tRNA synthetase alpha chain (EC 6.1.1.14)|
           (Glycine--tRNA ligase alpha chain) (GlyRS)
          Length = 288

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 17/43 (39%), Positives = 20/43 (46%)
 Frame = +1

Query: 1   VMILQHSILPG*NRLHIHPNRQQQVDLLATNTKPSIDR*ASLY 129
           V  +Q S  PG +R  +HPNR Q         KPS D    LY
Sbjct: 53  VAYVQPSRRPGDSRYGMHPNRMQHYYQFQVILKPSPDNIQELY 95

>SYGA_RICPR (Q9ZCB0) Glycyl-tRNA synthetase alpha chain (EC 6.1.1.14)|
           (Glycine--tRNA ligase alpha chain) (GlyRS)
          Length = 289

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 16/43 (37%), Positives = 20/43 (46%)
 Frame = +1

Query: 1   VMILQHSILPG*NRLHIHPNRQQQVDLLATNTKPSIDR*ASLY 129
           +  +Q S  PG +R  +HPNR Q         KPS D    LY
Sbjct: 53  IAYVQPSRRPGDSRYGMHPNRMQHYYQFQVILKPSPDNIQDLY 95

>YDCO_ECOLI (P76103) Inner membrane protein ydcO|
          Length = 391

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
 Frame = -2

Query: 249 SHDASIARPIQLS*YAECVYGYLLSTKAAGRSAPVFVLVFIEG-CSSIYARFGIGS 85
           +H  S+A P+ L   A      + + KAAG SAPV  L+   G  + +++ FG+ S
Sbjct: 209 AHSLSVALPLFLVTMASQNAPGIAAMKAAGYSAPVSPLIVFTGLLALVFSPFGVYS 264

>CHK1_YEAST (P38147) Serine/threonine-protein kinase CHK1 (EC 2.7.11.1)|
           (Checkpoint kinase 1)
          Length = 527

 Score = 27.7 bits (60), Expect = 7.6
 Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
 Frame = +2

Query: 8   YCNIQFSLAEIGYI-YTQ--TDNNRWISLLPIPNRA*IDEHPSINTSTKTGADLPAAFVD 178
           + +++ SL+   Y+ +TQ    NNR+IS  PI N     EH S++  T +         D
Sbjct: 305 FSHLKVSLSNENYLKFTQDTNSNNRYISTQPIGNELAELEHDSMHFQTVSNTQRAFTSYD 364

Query: 179 SKYPY 193
           S   Y
Sbjct: 365 SNTNY 369


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,945,017
Number of Sequences: 219361
Number of extensions: 925885
Number of successful extensions: 1973
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1917
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1973
length of database: 80,573,946
effective HSP length: 81
effective length of database: 62,805,705
effective search space used: 1507336920
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)