>RGA4_SCHPO (O74360) Probable Rho-type GTPase-activating protein 4|
          Length = 933

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 13/48 (27%), Positives = 27/48 (56%)
 Frame = -3

Query: 267 STPVLSFSTAIHSNQADSVCTSQKQCIIYLDVLARMEGRWNCQVCIQR 124
           STP+  F+ A+ ++QA+  C S  +  I  +   + +G+  C  C+++
Sbjct: 86  STPICEFN-AVSNSQANHPCCSNCRAFINSNAFGKFKGQHYCLPCLRK 132

>CD59_PAPSP (Q28785) CD59 glycoprotein precursor (Membrane attack complex|
           inhibition factor) (MACIF) (MAC-inhibitory protein)
           (MAC-IP) (Protectin)
          Length = 126

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
 Frame = -2

Query: 106 CAPVSTHCKA---CHTSFALCVLRFSGLMLSFLIWKFA 2
           C   +T+CK    C + F  C++  +GL +    WKFA
Sbjct: 31  CPNPTTNCKTAINCSSGFDTCLIARAGLQVYNQCWKFA 68

>NU100_YEAST (Q02629) Nucleoporin NUP100/NSP100 (Nuclear pore protein|
           NUP100/NSP100)
          Length = 959

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 14/45 (31%), Positives = 25/45 (55%)
 Frame = +3

Query: 27  NIRPLNRSTQSAKLVWQALQCVETGAHCNRLYISECTLDNSISLP 161
           N+ P+N +TQ+A L   A+  ++     N    S+ ++ NSI+ P
Sbjct: 582 NVPPVNNTTQNALLGTTAVPSLQQAPVTNEQLFSKISIPNSITNP 626

>CD59_MACFA (Q8SQ46) CD59 glycoprotein precursor (Membrane attack complex|
           inhibition factor) (MACIF) (MAC-inhibitory protein)
           (MAC-IP) (Protectin)
          Length = 128

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 3/38 (7%)
 Frame = -2

Query: 106 CAPVSTHCKA---CHTSFALCVLRFSGLMLSFLIWKFA 2
           C   +T CK    C + F  C++  +GL +    WKFA
Sbjct: 31  CPNPTTDCKTAINCSSGFDTCLIARAGLQVYNQCWKFA 68

>CD59_CERAE (Q28216) CD59 glycoprotein precursor (Membrane attack complex|
           inhibition factor) (MACIF) (MAC-inhibitory protein)
           (MAC-IP) (Protectin)
          Length = 128

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 3/38 (7%)
 Frame = -2

Query: 106 CAPVSTHCKA---CHTSFALCVLRFSGLMLSFLIWKFA 2
           C   +T CK    C + F  C++  +GL +    WKFA
Sbjct: 31  CPNPTTDCKTAINCSSGFDTCLIARAGLQVYNQCWKFA 68

>LOX3_SOYBN (P09186) Seed lipoxygenase-3 (EC 1.13.11.12) (L-3)|
          Length = 857

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
 Frame = +1

Query: 103 HTVID--CISLNAHLTIPSPFHPCQHI*VNDTLLL*GTNRISLI 228
           H V++   I+ N HL++  P +   H    DT+ + G  R+SL+
Sbjct: 523 HAVVEPFIIATNRHLSVVHPIYKLLHPHYRDTMNINGLARLSLV 566

>CRSP2_HUMAN (O60244) CRSP complex subunit 2 (Cofactor required for Sp1|
           transcriptional activation subunit 2) (Transcriptional
           coactivator CRSP150) (Vitamin D3 receptor-interacting
           protein complex 150 kDa component) (DRIP150) (Thyroid
           hormone receptor-ass
          Length = 1454

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 13/23 (56%), Positives = 17/23 (73%)
 Frame = +3

Query: 114 RLYISECTLDNSISLPSLPAHLS 182
           RLY  EC L+ + SLP +PAHL+
Sbjct: 775 RLY--ECVLEFARSLPDIPAHLN 795


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,477,250
Number of Sequences: 219361
Number of extensions: 946296
Number of successful extensions: 2301
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2251
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2301
length of database: 80,573,946
effective HSP length: 99
effective length of database: 58,857,207
effective search space used: 1412572968
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)