>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 62/74 (83%)
 Strand = Plus / Minus

                                                                            
Query: 278      aatcaagagcgattagcctggtaaaaatcgccagcgctaagaaaaacatgcttccctagc 337
                |||||||| ||| ||||| |||| ||||| || |  |||||||||||||| || || |||
Sbjct: 25961346 aatcaagaacgagtagccaggtagaaatctcctgtactaagaaaaacatgttttcccagc 25961287

                              
Query: 338      tgcagatcaattgg 351
                || |||||||||||
Sbjct: 25961286 tggagatcaattgg 25961273



 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 177      ctaagtaaatgatacattgc 196
                ||||||||||||||||||||
Sbjct: 11095326 ctaagtaaatgatacattgc 11095345

>dbj|AP003568.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0017B12
          Length = 157424

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 62/74 (83%)
 Strand = Plus / Minus

                                                                          
Query: 278    aatcaagagcgattagcctggtaaaaatcgccagcgctaagaaaaacatgcttccctagc 337
              |||||||| ||| ||||| |||| ||||| || |  |||||||||||||| || || |||
Sbjct: 116444 aatcaagaacgagtagccaggtagaaatctcctgtactaagaaaaacatgttttcccagc 116385

                            
Query: 338    tgcagatcaattgg 351
              || |||||||||||
Sbjct: 116384 tggagatcaattgg 116371

>dbj|AK105391.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-122-H06, full
           insert sequence
          Length = 960

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 62/74 (83%)
 Strand = Plus / Minus

                                                                       
Query: 278 aatcaagagcgattagcctggtaaaaatcgccagcgctaagaaaaacatgcttccctagc 337
           |||||||| ||| ||||| |||| ||||| || |  |||||||||||||| || || |||
Sbjct: 708 aatcaagaacgagtagccaggtagaaatctcctgtactaagaaaaacatgttttcccagc 649

                         
Query: 338 tgcagatcaattgg 351
           || |||||||||||
Sbjct: 648 tggagatcaattgg 635

>dbj|AK101482.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033041F01, full
            insert sequence
          Length = 4632

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 62/74 (83%)
 Strand = Plus / Minus

                                                                        
Query: 278  aatcaagagcgattagcctggtaaaaatcgccagcgctaagaaaaacatgcttccctagc 337
            |||||||| ||| ||||| |||| ||||| || |  |||||||||||||| || || |||
Sbjct: 4380 aatcaagaacgagtagccaggtagaaatctcctgtactaagaaaaacatgttttcccagc 4321

                          
Query: 338  tgcagatcaattgg 351
            || |||||||||||
Sbjct: 4320 tggagatcaattgg 4307

>gb|AC147101.2| Mus musculus BAC clone RP23-455H16 from chromosome 12, complete sequence
          Length = 168258

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 154    cccttccatccttgccagcaca 175
              ||||||||||||||||||||||
Sbjct: 103392 cccttccatccttgccagcaca 103413

>gb|AC132582.3| Mus musculus BAC clone RP24-319N10 from chromosome 12, complete sequence
          Length = 159310

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 154    cccttccatccttgccagcaca 175
              ||||||||||||||||||||||
Sbjct: 134924 cccttccatccttgccagcaca 134945

>gb|AC150912.3| Pan troglodytes BAC clone CH251-18B3 from chromosome 7, complete
             sequence
          Length = 170021

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 98    gggagcacactgtaatagac 117
             ||||||||||||||||||||
Sbjct: 37435 gggagcacactgtaatagac 37454

>gb|AC162380.4| Pan troglodytes BAC clone CH251-629G18 from chromosome 7, complete
             sequence
          Length = 210978

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 98    gggagcacactgtaatagac 117
             ||||||||||||||||||||
Sbjct: 18431 gggagcacactgtaatagac 18412

>gb|AC119166.16| Mus musculus chromosome 1, clone RP24-393L8, complete sequence
          Length = 163121

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 152   ctcccttccatccttgccagcaca 175
             |||| |||||||||||||||||||
Sbjct: 69242 ctcctttccatccttgccagcaca 69265

>gb|AC148932.3| Pan troglodytes BAC clone CH251-571G8 from chromosome 7, complete
              sequence
          Length = 232604

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 98     gggagcacactgtaatagac 117
              ||||||||||||||||||||
Sbjct: 178587 gggagcacactgtaatagac 178606

>gb|AY423588.1| Reticulitermes santonensis clone RS43 microsatellite sequence
          Length = 563

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 194 tgcttttgtgaggtacaaac 213
           ||||||||||||||||||||
Sbjct: 415 tgcttttgtgaggtacaaac 434

>gb|AC007683.5| Homo sapiens BAC clone RP11-401L13 from 7, complete sequence
          Length = 155735

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 98    gggagcacactgtaatagac 117
             ||||||||||||||||||||
Sbjct: 72616 gggagcacactgtaatagac 72597

>gb|AC126217.3| Rattus norvegicus 1 BAC CH230-9L4 (Children's Hospital Oakland Research
             Institute) complete sequence
          Length = 243051

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 153   tcccttccatccttgccagcacat 176
             |||||||| |||||||||||||||
Sbjct: 21284 tcccttccttccttgccagcacat 21307

>gb|AY318871.1| Canarypox virus strain ATCC VR-111, complete genome
          Length = 359853

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 110    taatagactgtatatctctgaatg 133
              |||||||||||| |||||||||||
Sbjct: 269002 taatagactgtacatctctgaatg 268979

>gb|AC142337.1| Pan troglodytes BAC clone RP43-39F23 from 7, complete sequence
          Length = 157646

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 98     gggagcacactgtaatagac 117
              ||||||||||||||||||||
Sbjct: 110435 gggagcacactgtaatagac 110416

>gb|AC146865.11| Medicago truncatula clone mth2-36m14, complete sequence
          Length = 128493

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 328   cttccctagctgcagatcaa 347
             ||||||||||||||||||||
Sbjct: 23908 cttccctagctgcagatcaa 23927

>emb|AL596225.11| Human DNA sequence from clone RP11-30D7 on chromosome 1 Contains part
             of the gene for a novel protein (FLJ31862, FLJ22091,
             FLJ10597) and two CpG islands, complete sequence
          Length = 148750

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 151   tctcccttccatccttgcca 170
             ||||||||||||||||||||
Sbjct: 32989 tctcccttccatccttgcca 33008

>emb|AL512510.13| Human DNA sequence from clone RP11-537P24 on chromosome 6 Contains a
             CpG island, complete sequence
          Length = 170970

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 63    aaacttgtgtggcaagcttt 82
             ||||||||||||||||||||
Sbjct: 50005 aaacttgtgtggcaagcttt 49986

>emb|AL358512.9| Human DNA sequence from clone RP11-102M16 on chromosome 1 Contains the
             3' end of the gene for interleukin 12 receptor beta 2
             (IL12RB2) and the 3' end of the gene for PAI-1
             mRNA-binding protein (PAI-RBP1), complete sequence
          Length = 45562

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 219   cagcctgattagaatgaatt 238
             ||||||||||||||||||||
Sbjct: 35204 cagcctgattagaatgaatt 35223

>gb|AC164627.4| Mus musculus 10 BAC RP23-382A18 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 192275

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 19    gaaaactcaacataagacca 38
             ||||||||||||||||||||
Sbjct: 31881 gaaaactcaacataagacca 31862

>gb|AC078880.27| Homo sapiens 12 BAC RP11-116D17 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 130824

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 160   catccttgccagcacatcta 179
             ||||||||||||||||||||
Sbjct: 40770 catccttgccagcacatcta 40789

>tpg|BK001791.1| TPA: TPA_inf: Bos taurus RTN2-C (RTN2) mRNA, complete cds
          Length = 1207

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 146 ttccatctcccttccatccttgcc 169
           ||||||||||||||||||| ||||
Sbjct: 744 ttccatctcccttccatccctgcc 767

>gb|AC161278.2| Pan troglodytes BAC clone CH251-486B7 from chromosome 7, complete
              sequence
          Length = 211383

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 98     gggagcacactgtaatagac 117
              ||||||||||||||||||||
Sbjct: 146439 gggagcacactgtaatagac 146458

>gb|AC148835.3| Pan troglodytes BAC clone CH251-25M11 from chromosome 7, complete
             sequence
          Length = 154596

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 98    gggagcacactgtaatagac 117
             ||||||||||||||||||||
Sbjct: 38100 gggagcacactgtaatagac 38119

>emb|CR383658.1| Human chromosome 14 DNA sequence BAC R-754I20 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 178323

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 198   tttgtgaggtacaaacagaa 217
             ||||||||||||||||||||
Sbjct: 36415 tttgtgaggtacaaacagaa 36396

>emb|CR383657.1| Human chromosome 14 DNA sequence BAC R-491G9 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 176745

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 198    tttgtgaggtacaaacagaa 217
              ||||||||||||||||||||
Sbjct: 154478 tttgtgaggtacaaacagaa 154459

>dbj|AP004007.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OJ1217_C01
          Length = 100180

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 177   ctaagtaaatgatacattgc 196
             ||||||||||||||||||||
Sbjct: 25232 ctaagtaaatgatacattgc 25251

>gb|AC006379.2|AC006379 Homo sapiens BAC clone RP11-456N16 from 7p15.1-p13, complete sequence
          Length = 202719

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 98   gggagcacactgtaatagac 117
            ||||||||||||||||||||
Sbjct: 2653 gggagcacactgtaatagac 2672

>ref|NM_182656.1| Bos taurus reticulon 2 (RTN2), mRNA
          Length = 1207

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 146 ttccatctcccttccatccttgcc 169
           ||||||||||||||||||| ||||
Sbjct: 744 ttccatctcccttccatccctgcc 767

>dbj|AB078046.1| Flexibacter canadensis gene for 16S rRNA, strain:IFO 15130
          Length = 1475

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 344 tcaattgggggatagccttc 363
           ||||||||||||||||||||
Sbjct: 106 tcaattgggggatagccttc 125

>gb|AC005400.1|AC005400 Homo sapiens clone UWGC:g1564a310 from 7p14-15, complete sequence
          Length = 42393

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 98   gggagcacactgtaatagac 117
            ||||||||||||||||||||
Sbjct: 8071 gggagcacactgtaatagac 8090

>gb|AC164629.14| Mus musculus 10 BAC RP23-16N3 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 221874

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 19    gaaaactcaacataagacca 38
             ||||||||||||||||||||
Sbjct: 67304 gaaaactcaacataagacca 67323

>gb|M62793.1|FBCRRDA F.canadensis 16S ribosomal RNA
          Length = 1471

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 344 tcaattgggggatagccttc 363
           ||||||||||||||||||||
Sbjct: 136 tcaattgggggatagccttc 155

>dbj|AP000539.1| Homo sapiens genomic DNA, chromosome 22q11.2, Cat Eye Syndrome region,
             clone:c72E11
          Length = 42207

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 198   tttgtgaggtacaaacagaa 217
             ||||||||||||||||||||
Sbjct: 19873 tttgtgaggtacaaacagaa 19854

>emb|AL591892.4| Mouse DNA sequence from clone RP23-422F22 on chromosome 15, complete
             sequence
          Length = 113798

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 177   ctaagtaaatgatacattgctttt 200
             |||||||||||||||||| |||||
Sbjct: 91466 ctaagtaaatgatacattactttt 91489


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,382,162
Number of Sequences: 3902068
Number of extensions: 3382162
Number of successful extensions: 74114
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 73966
Number of HSP's gapped (non-prelim): 148
length of query: 371
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 349
effective length of database: 17,147,199,772
effective search space: 5984372720428
effective search space used: 5984372720428
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)