ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl54b04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ACTHR_CAVPO (Q9Z1S9) Adrenocorticotropic hormone receptor (ACTH ... 28 4.3
2CASP1_DROME (O02002) Caspase-1 precursor (EC 3.4.22.-) [Contains... 27 9.7
3PER23_ARATH (O80912) Peroxidase 23 precursor (EC 1.11.1.7) (Atpe... 27 9.7
4PER22_ARATH (P24102) Peroxidase 22 precursor (EC 1.11.1.7) (Atpe... 27 9.7
5KLKB1_HUMAN (P03952) Plasma kallikrein precursor (EC 3.4.21.34) ... 27 9.7
6GLGB_ECOL6 (Q8FCR7) 1,4-alpha-glucan branching enzyme (EC 2.4.1.... 27 9.7

>ACTHR_CAVPO (Q9Z1S9) Adrenocorticotropic hormone receptor (ACTH receptor)|
           (ACTH-R) (Melanocortin receptor 2) (MC2-R)
           (Adrenocorticotropin receptor)
          Length = 297

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
 Frame = -2

Query: 232 SVL*TVWSICTR*LLA*LSPTVLSLFSLILHTVLSFTACVPLASVCII*L--ELYVMT*S 59
           +VL  +W+ C        S   + LFS  + TVL+FT+  PL  V I+ L   +++M  S
Sbjct: 149 AVLSIIWTFCIG------SGITMVLFSHHVPTVLTFTSLFPLMLVFILCLYVHMFLMARS 202

Query: 58  H 56
           H
Sbjct: 203 H 203



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>CASP1_DROME (O02002) Caspase-1 precursor (EC 3.4.22.-) [Contains: Caspase-1|
           subunit p22; Caspase-1 subunit p13]
          Length = 323

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 17/41 (41%), Positives = 22/41 (53%)
 Frame = +2

Query: 149 QGEKREDGGAKLS*ELASTDRPNSLQYTIPIYSIVQFSSIT 271
           QG+ R DGG  L   +  TD  +S  Y IPI++   FS  T
Sbjct: 197 QGD-RLDGGITLEKGVTETDGESSTSYKIPIHADFLFSYST 236



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>PER23_ARATH (O80912) Peroxidase 23 precursor (EC 1.11.1.7) (Atperox P23)|
           (ATP34)
          Length = 349

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 15/24 (62%), Positives = 16/24 (66%)
 Frame = -3

Query: 333 LTGNTGTIRTNCRVVGWSIERVIE 262
           LTG  G IR NCRVV   I RV+E
Sbjct: 318 LTGTQGEIRQNCRVVNPRI-RVVE 340



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>PER22_ARATH (P24102) Peroxidase 22 precursor (EC 1.11.1.7) (Atperox P22)|
           (ATPEa) (Basic peroxidase E)
          Length = 349

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 15/24 (62%), Positives = 16/24 (66%)
 Frame = -3

Query: 333 LTGNTGTIRTNCRVVGWSIERVIE 262
           LTG  G IR NCRVV   I RV+E
Sbjct: 318 LTGTQGEIRQNCRVVNPRI-RVVE 340



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>KLKB1_HUMAN (P03952) Plasma kallikrein precursor (EC 3.4.21.34) (Plasma|
           prekallikrein) (Kininogenin) (Fletcher factor)
           [Contains: Plasma kallikrein heavy chain; Plasma
           kallikrein light chain]
          Length = 638

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -3

Query: 327 GNTGTIRTNCRVVGWSIER 271
           G+T TI TNC V GW   +
Sbjct: 508 GDTSTIYTNCWVTGWGFSK 526



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>GLGB_ECOL6 (Q8FCR7) 1,4-alpha-glucan branching enzyme (EC 2.4.1.18) (Glycogen|
           branching enzyme) (BE)
           (1,4-alpha-D-glucan:1,4-alpha-D-glucan
           6-glucosyl-transferase)
          Length = 728

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 15/34 (44%), Positives = 19/34 (55%)
 Frame = +2

Query: 137 SMQDQGEKREDGGAKLS*ELASTDRPNSLQYTIP 238
           SM   G    +GGA  S E+AS  R +SL  T+P
Sbjct: 683 SMHYHGSNAGNGGAVHSDEIASHGRQHSLSLTLP 716


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,347,494
Number of Sequences: 219361
Number of extensions: 768490
Number of successful extensions: 1698
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1679
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1698
length of database: 80,573,946
effective HSP length: 87
effective length of database: 61,489,539
effective search space used: 1475748936
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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