ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl54b01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1INX2_SCHAM (Q9XYN1) Innexin inx2 (Innexin-2) (G-Inx2) 29 3.4
2FCRL5_HUMAN (Q96RD9) Fc receptor-like protein 5 precursor (Immun... 28 7.7

>INX2_SCHAM (Q9XYN1) Innexin inx2 (Innexin-2) (G-Inx2)|
          Length = 359

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 17/55 (30%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
 Frame = -2

Query: 228 QFANSGDLQSFXXXXXXXANIVSGVLYTSIYFETTRCWWLI-SVLSFGGMIYKLS 67
           ++  SG +Q+F        NIV+  +Y  ++F     W++I SVL+  G++Y+L+
Sbjct: 242 KYGPSGSVQTFDGLCVLPLNIVNEKIYVFLWF-----WFVILSVLTGIGLVYRLA 291



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>FCRL5_HUMAN (Q96RD9) Fc receptor-like protein 5 precursor (Immunoglobulin|
           receptor translocation-associated gene 2 protein)
           (BXMAS1) (CD307 antigen)
          Length = 977

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 15/60 (25%), Positives = 22/60 (36%)
 Frame = +1

Query: 103 GNQPPTSGGLKINASVQHAAYNIXXXXXXXLEALKITRICKLDASTPVSGDLAIIYSIQH 282
           G +P  +  L +   V H   N+        E  K+T  C+        G L I+Y   H
Sbjct: 362 GAKPSKAVSLSVTVPVSHPVLNLSSPEDLIFEGAKVTLHCEAQ-----RGSLPILYQFHH 416


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,511,817
Number of Sequences: 219361
Number of extensions: 717698
Number of successful extensions: 1501
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1489
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1501
length of database: 80,573,946
effective HSP length: 77
effective length of database: 63,683,149
effective search space used: 1528395576
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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