>ENDR_PAEPO (P27871) Probable HTH-type transcriptional regulator endR|
          Length = 340

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 4/37 (10%)
 Frame = +3

Query: 126 YTQKKYHYQSNNTTNKINQQM----YIYDEAAAPLHQ 224
           + QK+Y+Y S NT  KI Q +    YI +E A  L Q
Sbjct: 22  FLQKRYNYMSENTKKKIEQAIEDLSYIPNEVARSLKQ 58

>LFTR_XYLFT (Q87DL5) Leucyl/phenylalanyl-tRNA--protein transferase (EC 2.3.2.6)|
           (L/F-transferase) (Leucyltransferase)
           (Phenyalanyltransferase)
          Length = 243

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = +2

Query: 35  VATGDKYNRSSFFQIHTAVARSNTSQVGYVLHTKEIPL 148
           VA G  +   S F  H   ++   + + Y LHT  +PL
Sbjct: 153 VAIGRMFFGESMFSTHNGASKIALASLAYFLHTHSVPL 190

>THIG_HELHP (Q7VF28) Thiazole biosynthesis protein thiG|
          Length = 263

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 3/47 (6%)
 Frame = +1

Query: 139 NTTISQITQPIRSTNKCTYMMK---LLLLSISIPRKKY*ETTDELEG 270
           NT I+Q   P+       Y +K   L  L+  IPRK Y   +  LEG
Sbjct: 212 NTAIAQAQNPVTMAEAMKYAVKAGRLSYLAGRIPRKAYASASSPLEG 258

>SEM3C_CHICK (O42236) Semaphorin-3C precursor (Collapsin-3) (COLL-3)|
          Length = 751

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 23/60 (38%), Positives = 30/60 (50%), Gaps = 8/60 (13%)
 Frame = +3

Query: 147 YQSNN--TTNKIN---QQMYIYDEAAA---PLHQYSKEKILRND*RIRGTSCGDKTRARD 302
           +QSN+  TT KI+   QQ+Y+  E      PLH+           RI GT+C D   ARD
Sbjct: 480 FQSNSPITTMKISSKKQQLYVSSEEGVTQVPLHRC----------RIYGTACADCCLARD 529

>ARID2_HUMAN (Q68CP9) AT-rich interactive domain-containing protein 2 (ARID|
            domain-containing protein 2) (BRG1-associated factor 200)
            (BAF200)
          Length = 1835

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 13/49 (26%), Positives = 26/49 (53%)
 Frame = +2

Query: 2    DPNQHELHLTSVATGDKYNRSSFFQIHTAVARSNTSQVGYVLHTKEIPL 148
            D  ++E+H+ S+  G KY+ SS    ++   +S T+Q   + +   + L
Sbjct: 1282 DTKENEMHVGSLLNGRKYSDSSLPPSNSGKIQSETNQCSLISNGPSLEL 1330

>STP22_YEAST (P25604) Suppressor protein STP22 of temperature-sensitive|
           alpha-factor receptor and arginine permease (Vacuolar
           protein sorting-associated protein VPS23)
          Length = 385

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 8/18 (44%), Positives = 15/18 (83%)
 Frame = +1

Query: 283 IKQGREMSASRYLI*WHL 336
           +KQGRE++  ++L+ WH+
Sbjct: 360 VKQGRELARQQFLVRWHI 377

>NHR48_CAEEL (Q94407) Nuclear hormone receptor family member nhr-48|
          Length = 780

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 12/20 (60%), Positives = 13/20 (65%)
 Frame = +3

Query: 195 YDEAAAPLHQYSKEKILRND 254
           YDEA AP HQ S  + L ND
Sbjct: 226 YDEAPAPSHQMSVRQYLAND 245


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,330,103
Number of Sequences: 219361
Number of extensions: 877873
Number of successful extensions: 2142
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2123
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2141
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 1407308304
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)