>AMDM_SCHPO (P50998) AMP deaminase (EC 3.5.4.6) (Myoadenylate deaminase)|
          Length = 846

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 16/56 (28%), Positives = 28/56 (50%)
 Frame = +3

Query: 138 VDQPSIPELPLAYQLTLTTERETHKTEATSQPKVHPKTMEL*HVLEEISKMHGTGE 305
           +D+ ++P + LAY+  LT  +E        QP  HP   +L  ++ +   M GT +
Sbjct: 738 IDRTNVPIIRLAYR-ALTLTQEIALVNKHVQPSKHPSNHDLEELIHKYDAMTGTSD 792

>IF3X_HUMAN (O75153) Putative eukaryotic translation initiation factor 3|
           subunit (eIF-3)
          Length = 1309

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 15/40 (37%), Positives = 23/40 (57%)
 Frame = +2

Query: 5   ELWPAIDCKNKFQLIHSNARHYLADSFQTFMFDSRPLPEP 124
           EL  +++CK    +I ++ RHY+ D  +TF  D   LP P
Sbjct: 544 ELCSSVECKG---IIGNDGRHYILDLLRTFPPDLNFLPVP 580

>MSH6_HUMAN (P52701) DNA mismatch repair protein MSH6 (MutS-alpha 160 kDa|
           subunit) (G/T mismatch binding protein) (GTBP) (GTMBP)
           (p160)
          Length = 1360

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 23/91 (25%), Positives = 38/91 (41%), Gaps = 2/91 (2%)
 Frame = +3

Query: 51  TATPDIIWQIAFKRSCLILDLYQNLWTAPVDQPSIPELPLAYQL--TLTTERETHKTEAT 224
           +A P+I+  +      L  D  + L  A  D+PS PE     ++  T  T++     E  
Sbjct: 167 SAKPEILRAMQRADEALNKDKIKRLELAVCDEPSEPEEEEEMEVGTTYVTDKSEEDNEIE 226

Query: 225 SQPKVHPKTMEL*HVLEEISKMHGTGEIQPD 317
           S+ +V PKT        +I K     + + D
Sbjct: 227 SEEEVQPKTQGSRRSSRQIKKRRVISDSESD 257

>SIGL5_HUMAN (O15389) Sialic acid-binding Ig-like lectin 5 precursor (Siglec-5)|
           (Obesity-binding protein 2) (OB-binding protein 2)
           (OB-BP2) (CD33 antigen-like 2) (CD170 antigen)
          Length = 551

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 15/37 (40%), Positives = 17/37 (45%)
 Frame = +3

Query: 126 WTAPVDQPSIPELPLAYQLTLTTERETHKTEATSQPK 236
           WT     P  PE   + +LTLT   E H T  T Q K
Sbjct: 180 WTGNALSPLDPETTRSSELTLTPRPEDHGTNLTCQMK 216

>KRAF1_DROME (P11346) Raf homolog serine/threonine-protein kinase dRAF-1 (EC|
           2.7.11.1) (Protein pole-hole)
          Length = 739

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 24/74 (32%), Positives = 33/74 (44%), Gaps = 3/74 (4%)
 Frame = +2

Query: 53  SNARHYLADSFQTFMFDSRP-LPEPMDGTSRSTQHS*ASTCIPAHPYNRKRDAQNRG--N 223
           +N R   ++  ++ +  +RP LP P    S STQ S  ST     P  R  D  N+    
Sbjct: 353 NNIRSVTSEVQRSLIMQARPPLPHPCTDHSNSTQASPTSTLKHNRPRARSADESNKNLLL 412

Query: 224 EPAKSSP*NDGTIA 265
             AKSS  N   +A
Sbjct: 413 RDAKSSEENWNILA 426

>BAG_STRAG (P27951) IgA FC receptor precursor (Beta antigen) (B antigen)|
          Length = 1164

 Score = 24.6 bits (52), Expect(2) = 6.3
 Identities = 19/49 (38%), Positives = 21/49 (42%), Gaps = 4/49 (8%)
 Frame = +3

Query: 141 DQPSIPELPLAYQLTLT--TERETHKTEATSQPKV--HPKTMEL*HVLE 275
           D P IPELP A        T       +A   P+V   PKT E  HV E
Sbjct: 831 DTPKIPELPQAPDTPQAPDTPHVPESPKAPEAPRVPESPKTPEAPHVPE 879



 Score = 21.6 bits (44), Expect(2) = 6.3
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +1

Query: 313 RTEEAESIPEPP 348
           +T EA  IPEPP
Sbjct: 906 KTPEAPKIPEPP 917

>PKHD1_HUMAN (Q8TCZ9) Polycystic kidney and hepatic disease 1 precursor|
            (Fibrocystin) (Polyductin) (Tigmin)
          Length = 4074

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 11/35 (31%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = +3

Query: 60   PDIIWQIAFKRSCLILDLYQ-NLWTAPVDQPSIPE 161
            P ++W +   RSC I++L + ++W   +  P IP+
Sbjct: 1225 PALVWVLVGNRSCDIVNLTEASIWCETLPAPQIPD 1259

>WNK1_MOUSE (P83741) Serine/threonine-protein kinase WNK1 (EC 2.7.11.1) (Protein|
            kinase with no lysine 1) (Protein kinase,
            lysine-deficient 1)
          Length = 2377

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +1

Query: 316  TEEAESIPEPPPLLCAKDLSKRSLSPS 396
            TE+    P  PP LC+K L  ++LS S
Sbjct: 2018 TEDGSGSPHSPPHLCSKSLPVQNLSQS 2044

>ATS8_HUMAN (Q9UP79) ADAMTS-8 precursor (EC 3.4.24.-) (A disintegrin and|
           metalloproteinase with thrombospondin motifs 8) (ADAM-TS
           8) (ADAM-TS8) (METH-2) (METH-8)
          Length = 890

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 14/27 (51%), Positives = 17/27 (62%)
 Frame = +1

Query: 310 SRTEEAESIPEPPPLLCAKDLSKRSLS 390
           S+ EEAE   EPPP L A   +KR +S
Sbjct: 191 SQEEEAEGASEPPPPLGATSRTKRFVS 217

>FRUA_STRMU (Q03174) Fructan beta-fructosidase precursor (EC 3.2.1.80)|
           (Exo-beta-D-fructosidase) (Fructanase)
          Length = 1423

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 27/78 (34%), Positives = 37/78 (47%), Gaps = 14/78 (17%)
 Frame = +3

Query: 129 TAPVDQPSIPELPLA---YQLTLTTERETHKTEATSQPKVH--------PKTMEL*HV-- 269
           T P D   I     A   YQ+T TTE +   T A S+P+          PK  E+  V  
Sbjct: 94  TEPTDNEPISSSDGASSPYQVTDTTEPQQTLTPADSEPQAKADVQQAAAPKKEEINPVTN 153

Query: 270 LEEIS-KMHGTGEIQPDG 320
           LE++S   +GT E++ DG
Sbjct: 154 LEDMSHDTNGTWEVREDG 171

>E417_ADE02 (P03238) Probable early E4 17 kDa protein [Contains: Early E4 10|
           kDa protein]
          Length = 153

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 24/92 (26%), Positives = 38/92 (41%), Gaps = 20/92 (21%)
 Frame = +3

Query: 126 WTAP---VDQPSIPELPLAYQL--------------TLTTERETHKTEATSQPKVHPKTM 254
           WT+P   V+QP + + P+A QL               +T ER   +    +   + PK M
Sbjct: 63  WTSPSPPVEQPQVGQQPVAQQLDSDMNLSELPGEFINITDERLARQETVWN---ITPKNM 119

Query: 255 EL*HVLEEISKMHGTGEIQP---DGRGRVNTR 341
            + H +       G   +     +G GR+NTR
Sbjct: 120 SVTHDMMLFKASRGERTVYSVCWEGGGRLNTR 151


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,914,000
Number of Sequences: 219361
Number of extensions: 1204147
Number of successful extensions: 3200
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3124
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3200
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 1365190992
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)