>gb|AC092827.8| Homo sapiens 12p BAC RP11-186N14 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 117636

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 112   aaaacaatgtatatagttctct 133
             ||||||||||||||||||||||
Sbjct: 97578 aaaacaatgtatatagttctct 97599

>emb|AL772362.8| Zebrafish DNA sequence from clone CH211-173K16 in linkage group 13,
              complete sequence
          Length = 165993

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 176    ttcatataagctctcgactgagtttc 201
              |||||||| |||||||||||||||||
Sbjct: 151331 ttcatatatgctctcgactgagtttc 151306

>ref|XM_466019.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3549

 Score = 42.1 bits (21), Expect = 1.00
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 95   ttattgagcttaggggaaaaacaatgtat 123
            ||||| || ||||||||||||||||||||
Sbjct: 3443 ttattaagtttaggggaaaaacaatgtat 3415

>gb|AC113028.15| Mus musculus chromosome 5, clone RP23-205D3, complete sequence
          Length = 275646

 Score = 42.1 bits (21), Expect = 1.00
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 95     ttattgagcttaggggaaaaa 115
              |||||||||||||||||||||
Sbjct: 246866 ttattgagcttaggggaaaaa 246886

>gb|AC119906.6| Mus musculus chromosome 5, clone RP24-239D13, complete sequence
          Length = 257203

 Score = 42.1 bits (21), Expect = 1.00
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 95    ttattgagcttaggggaaaaa 115
             |||||||||||||||||||||
Sbjct: 88447 ttattgagcttaggggaaaaa 88467

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 1.00
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                             
Query: 95       ttattgagcttaggggaaaaacaatgtat 123
                ||||| || ||||||||||||||||||||
Sbjct: 19118371 ttattaagtttaggggaaaaacaatgtat 19118399

>gb|AC017081.8| Homo sapiens BAC clone RP11-470J24 from 2, complete sequence
          Length = 149462

 Score = 42.1 bits (21), Expect = 1.00
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 210   cccaaaactttcatatctaaa 230
             |||||||||||||||||||||
Sbjct: 29600 cccaaaactttcatatctaaa 29580

>dbj|AP004772.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0415B12
          Length = 157419

 Score = 42.1 bits (21), Expect = 1.00
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 95    ttattgagcttaggggaaaaacaatgtat 123
             ||||| || ||||||||||||||||||||
Sbjct: 16620 ttattaagtttaggggaaaaacaatgtat 16648

>dbj|AP005749.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0047A17
          Length = 149142

 Score = 42.1 bits (21), Expect = 1.00
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 95     ttattgagcttaggggaaaaacaatgtat 123
              ||||| || ||||||||||||||||||||
Sbjct: 123892 ttattaagtttaggggaaaaacaatgtat 123920

>dbj|AK065061.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001J15, full
            insert sequence
          Length = 3547

 Score = 42.1 bits (21), Expect = 1.00
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 95   ttattgagcttaggggaaaaacaatgtat 123
            ||||| || ||||||||||||||||||||
Sbjct: 3441 ttattaagtttaggggaaaaacaatgtat 3413

>dbj|AK063159.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-D08, full
            insert sequence
          Length = 1551

 Score = 42.1 bits (21), Expect = 1.00
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 95   ttattgagcttaggggaaaaacaatgtat 123
            ||||| || ||||||||||||||||||||
Sbjct: 1459 ttattaagtttaggggaaaaacaatgtat 1431

>emb|BX629357.1|CNS09SBV Tetraodon nigroviridis BAC sequence
          Length = 168910

 Score = 42.1 bits (21), Expect = 1.00
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 163    ttcttactaagttttcatata 183
              |||||||||||||||||||||
Sbjct: 141218 ttcttactaagttttcatata 141198

>emb|AL671881.8| Mouse DNA sequence from clone RP23-206E1 on chromosome X, complete
              sequence
          Length = 195413

 Score = 42.1 bits (21), Expect = 1.00
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 75     gtccacaaaggacacagacct 95
              |||||||||||||||||||||
Sbjct: 152418 gtccacaaaggacacagacct 152438

>gb|AC149483.1| Populus trichocarpa clone Pop1-69I13, complete sequence
          Length = 51685

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 110   gaaaaacaatgtatatagttctct 133
             |||||||||| |||||||||||||
Sbjct: 28326 gaaaaacaatatatatagttctct 28303

>gb|AC117215.3| Mus musculus BAC clone RP23-308M1 from 7, complete sequence
          Length = 192092

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 122   atatagttctcttcttctaatggc 145
             |||| |||||||||||||||||||
Sbjct: 99542 atatggttctcttcttctaatggc 99565

>emb|BX323825.19| Zebrafish DNA sequence from clone DKEYP-51B2 in linkage group 5, complete
              sequence
          Length = 185915

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 146    ataaatatagtctctctttc 165
              ||||||||||||||||||||
Sbjct: 181778 ataaatatagtctctctttc 181797

>gb|AC104455.2| Homo sapiens chromosome 1 clone RP4-682E18, complete sequence
          Length = 125123

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 119   tgtatatagttctcttcttc 138
             ||||||||||||||||||||
Sbjct: 87138 tgtatatagttctcttcttc 87157

>gb|AC079389.2| Rattus norvegicus strain Brown Norway chromosome 6 clone RP31-263K14,
             complete sequence
          Length = 151836

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 112   aaaacaatgtatatagttct 131
             ||||||||||||||||||||
Sbjct: 34730 aaaacaatgtatatagttct 34711

>gb|AF115319.1|AF115319 Mus musculus Ucp2 gene, promoter sequence
          Length = 7342

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 122  atatagttctcttcttctaatggc 145
            |||| |||||||||||||||||||
Sbjct: 3933 atatggttctcttcttctaatggc 3910

>emb|BX465852.6| Zebrafish DNA sequence from clone CH211-139A5 in linkage group 5,
             complete sequence
          Length = 160041

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 146   ataaatatagtctctctttc 165
             ||||||||||||||||||||
Sbjct: 88307 ataaatatagtctctctttc 88326

>gb|AC064837.6| Homo sapiens BAC clone RP11-693G13 from 2, complete sequence
          Length = 111857

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 134   tcttctaatggcataaatat 153
             ||||||||||||||||||||
Sbjct: 84384 tcttctaatggcataaatat 84403

>dbj|AP002428.3| Homo sapiens genomic DNA, chromosome 11q clone:RP11-99C10, complete
              sequences
          Length = 175110

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 214    aaactttcatatctaaacca 233
              ||||||||||||||||||||
Sbjct: 139050 aaactttcatatctaaacca 139031

>dbj|AP000923.5| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-752D5, complete
             sequences
          Length = 170973

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 214   aaactttcatatctaaacca 233
             ||||||||||||||||||||
Sbjct: 31136 aaactttcatatctaaacca 31117

>gb|AC151839.2| Mus musculus BAC clone RP23-191M5 from 7, complete sequence
          Length = 232568

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 122   atatagttctcttcttctaatggc 145
             |||| |||||||||||||||||||
Sbjct: 42584 atatggttctcttcttctaatggc 42607

>gb|AC147742.13| Mus musculus chromosome 7, clone RP23-202M23, complete sequence
          Length = 194167

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 122   atatagttctcttcttctaatggc 145
             |||| |||||||||||||||||||
Sbjct: 78320 atatggttctcttcttctaatggc 78343


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,466,441
Number of Sequences: 3902068
Number of extensions: 3466441
Number of successful extensions: 59590
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 59519
Number of HSP's gapped (non-prelim): 71
length of query: 301
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 279
effective length of database: 17,147,199,772
effective search space: 4784068736388
effective search space used: 4784068736388
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)