Clone Name | rbastl53h10 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | ADEN_ADEF1 (Q9IIH4) Adenain (EC 3.4.22.39) (Endoprotease) (Late ... | 28 | 6.9 | 2 | SKEL_DROME (Q9GPJ1) Protein skeletor | 28 | 6.9 | 3 | GRT1_SCHPO (Q9C469) Zinc finger protein grt1 | 28 | 6.9 |
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>ADEN_ADEF1 (Q9IIH4) Adenain (EC 3.4.22.39) (Endoprotease) (Late L3 23 kDa| protein) Length = 204 Score = 28.1 bits (61), Expect = 6.9 Identities = 11/26 (42%), Positives = 17/26 (65%) Frame = +2 Query: 41 VRLASNTPPTQLYSSPSLFLTHTHTK 118 + L PPT+L+SS ++LTH + K Sbjct: 146 IDLVDGIPPTKLHSSYGIYLTHCNQK 171
>SKEL_DROME (Q9GPJ1) Protein skeletor| Length = 743 Score = 28.1 bits (61), Expect = 6.9 Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 2/29 (6%) Frame = +2 Query: 56 NTPPTQLYSSPSLFL--THTHTKHTSPPA 136 N PT++ S P + L TH HT + SP A Sbjct: 91 NVTPTEISSRPEILLGETHAHTLNASPSA 119
>GRT1_SCHPO (Q9C469) Zinc finger protein grt1| Length = 648 Score = 28.1 bits (61), Expect = 6.9 Identities = 10/14 (71%), Positives = 11/14 (78%) Frame = -2 Query: 150 RWAKCAGGDVCFVC 109 R KC+GGDVCF C Sbjct: 20 RKVKCSGGDVCFEC 33 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 23,950,646 Number of Sequences: 219361 Number of extensions: 358674 Number of successful extensions: 1106 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 1081 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1106 length of database: 80,573,946 effective HSP length: 29 effective length of database: 74,212,477 effective search space used: 1781099448 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)