>gb|AY579884.1| Hordeum vulgare AML6 mRNA, complete cds
          Length = 3269

 Score =  170 bits (86), Expect = 8e-40
 Identities = 86/86 (100%)
 Strand = Plus / Minus

                                                                        
Query: 8    aaaatgaaccgagtttaaattaaaagcattcaagtcagattagcatccaacacccctcca 67
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3251 aaaatgaaccgagtttaaattaaaagcattcaagtcagattagcatccaacacccctcca 3192

                                      
Query: 68   actcaactgtacagctccccatccct 93
            ||||||||||||||||||||||||||
Sbjct: 3191 actcaactgtacagctccccatccct 3166



 Score = 73.8 bits (37), Expect = 1e-10
 Identities = 37/37 (100%)
 Strand = Plus / Minus

                                                 
Query: 125  tcacctcctgcgcatttcgcccaccttgcaaccgtcc 161
            |||||||||||||||||||||||||||||||||||||
Sbjct: 3132 tcacctcctgcgcatttcgcccaccttgcaaccgtcc 3096

>gb|AC026441.5| Homo sapiens chromosome 5 clone CTD-2280O3, complete sequence
          Length = 112533

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 24    aaattaaaagcattcaagtc 43
             ||||||||||||||||||||
Sbjct: 52908 aaattaaaagcattcaagtc 52889

>gb|AC016648.5|AC016648 Homo sapiens chromosome 5 clone RPCI-1_137K24, complete sequence
          Length = 123946

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 24    aaattaaaagcattcaagtc 43
             ||||||||||||||||||||
Sbjct: 77697 aaattaaaagcattcaagtc 77716

>gb|AC154406.2| Mus musculus BAC clone RP24-251M20 from 9, complete sequence
          Length = 169877

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 27     ttaaaagcattcaagtcaga 46
              ||||||||||||||||||||
Sbjct: 145499 ttaaaagcattcaagtcaga 145518

>gb|AC134329.3| Mus musculus BAC clone RP24-310D17 from 10, complete sequence
          Length = 159173

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 54    ccaacacccctccaactcaa 73
             ||||||||||||||||||||
Sbjct: 97298 ccaacacccctccaactcaa 97317

>emb|AL954191.5| Zebrafish DNA sequence from clone CH211-230G14, complete sequence
          Length = 151595

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 22    ttaaattaaaagcattcaagtcag 45
             ||||||||| ||||||||||||||
Sbjct: 57863 ttaaattaacagcattcaagtcag 57886

>gb|M19782.1|PARASAGH P.tetraurelia A-surface antigen gene locus DNA, clone SA4-3
          Length = 612

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 21  tttaaattaaaagcattcaa 40
           ||||||||||||||||||||
Sbjct: 375 tttaaattaaaagcattcaa 356

>gb|AE014292.2| Brucella suis 1330 chromosome II, complete sequence
          Length = 1207381

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 139    tttcgcccaccttgcaacc 157
              |||||||||||||||||||
Sbjct: 848349 tttcgcccaccttgcaacc 848367

>gb|AC127234.3| Mus musculus BAC clone RP24-566K14 from chromosome 18, complete sequence
          Length = 181515

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 29     aaaagcattcaagtcagat 47
              |||||||||||||||||||
Sbjct: 126029 aaaagcattcaagtcagat 126011

>emb|AL161738.15| Human DNA sequence from clone RP11-549G1 on chromosome 1q31.2-32.1,
              complete sequence
          Length = 148844

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 19     agtttaaattaaaagcatt 37
              |||||||||||||||||||
Sbjct: 101748 agtttaaattaaaagcatt 101730

>emb|AL121749.14|HSBA425A6 Human DNA sequence from clone RP11-425A6 on chromosome 10 Contains the
             3' end of the gene for cyclin fold protein 1 (CFP1)
             (CBCP1), the gene for connexin40.1 (CX40.1) (FLJ90023),
             the FZD8 gene for frizzled homolog 8 (Drosophila) and two
             CpG islands, complete sequence
          Length = 166007

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 66    caactcaactgtacagctcccca 88
             ||||||||||| |||||||||||
Sbjct: 90625 caactcaactgcacagctcccca 90603

>gb|DQ357507.1| Drosophila simulans strain T14 sex-lethal (Sxl) gene, partial cds
          Length = 592

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 27 ttaaaagcattcaagtcag 45
          |||||||||||||||||||
Sbjct: 8  ttaaaagcattcaagtcag 26

>gb|DQ357473.1| Drosophila simulans strain xy105 sex-lethal (Sxl) gene, partial
          cds
          Length = 597

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 27 ttaaaagcattcaagtcag 45
          |||||||||||||||||||
Sbjct: 8  ttaaaagcattcaagtcag 26

>gb|DQ357472.1| Drosophila simulans strain xy104 sex-lethal (Sxl) gene, partial
          cds
          Length = 597

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 27 ttaaaagcattcaagtcag 45
          |||||||||||||||||||
Sbjct: 8  ttaaaagcattcaagtcag 26

>gb|DQ357471.1| Drosophila simulans strain xy103 sex-lethal (Sxl) gene, partial
          cds
          Length = 597

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 27 ttaaaagcattcaagtcag 45
          |||||||||||||||||||
Sbjct: 8  ttaaaagcattcaagtcag 26

>gb|DQ357468.1| Drosophila simulans strain Tz32 sex-lethal (Sxl) gene, partial
          cds
          Length = 609

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 27 ttaaaagcattcaagtcag 45
          |||||||||||||||||||
Sbjct: 8  ttaaaagcattcaagtcag 26

>gb|DQ357457.1| Drosophila simulans strain Tz4b sex-lethal (Sxl) gene, partial
          cds
          Length = 607

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 27 ttaaaagcattcaagtcag 45
          |||||||||||||||||||
Sbjct: 8  ttaaaagcattcaagtcag 26

>gb|DQ357445.1| Drosophila simulans strain TA7 sex-lethal (Sxl) gene, partial cds
          Length = 598

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 27 ttaaaagcattcaagtcag 45
          |||||||||||||||||||
Sbjct: 8  ttaaaagcattcaagtcag 26

>gb|DQ357443.1| Drosophila simulans strain TA5 sex-lethal (Sxl) gene, partial cds
          Length = 606

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 27 ttaaaagcattcaagtcag 45
          |||||||||||||||||||
Sbjct: 8  ttaaaagcattcaagtcag 26

>gb|DQ357423.1| Drosophila simulans strain H54 sex-lethal (Sxl) gene, partial cds
          Length = 592

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 27 ttaaaagcattcaagtcag 45
          |||||||||||||||||||
Sbjct: 8  ttaaaagcattcaagtcag 26

>gb|DQ357421.1| Drosophila simulans strain H52 sex-lethal (Sxl) gene, partial cds
          Length = 593

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 27 ttaaaagcattcaagtcag 45
          |||||||||||||||||||
Sbjct: 8  ttaaaagcattcaagtcag 26

>gb|DQ357420.1| Drosophila simulans strain H51 sex-lethal (Sxl) gene, partial cds
          Length = 592

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 27 ttaaaagcattcaagtcag 45
          |||||||||||||||||||
Sbjct: 8  ttaaaagcattcaagtcag 26

>gb|DQ357418.1| Drosophila simulans strain H49 sex-lethal (Sxl) gene, partial cds
          Length = 593

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 27 ttaaaagcattcaagtcag 45
          |||||||||||||||||||
Sbjct: 8  ttaaaagcattcaagtcag 26

>gb|DQ357411.1| Drosophila simulans strain H37 sex-lethal (Sxl) gene, partial cds
          Length = 592

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 27 ttaaaagcattcaagtcag 45
          |||||||||||||||||||
Sbjct: 8  ttaaaagcattcaagtcag 26

>gb|DQ357409.1| Drosophila simulans strain H34 sex-lethal (Sxl) gene, partial cds
          Length = 592

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 27 ttaaaagcattcaagtcag 45
          |||||||||||||||||||
Sbjct: 8  ttaaaagcattcaagtcag 26

>gb|DQ357399.1| Drosophila simulans strain BA6 sex-lethal (Sxl) gene, partial cds
          Length = 594

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 27 ttaaaagcattcaagtcag 45
          |||||||||||||||||||
Sbjct: 8  ttaaaagcattcaagtcag 26

>gb|CP000102.1| Methanosphaera stadtmanae DSM 3091, complete genome
          Length = 1767403

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 80     agctccccatccctttttt 98
              |||||||||||||||||||
Sbjct: 846475 agctccccatccctttttt 846457

>gb|AC132615.5| Mus musculus BAC clone RP23-301J15 from 9, complete sequence
          Length = 201718

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 49     agcatccaacacccctcca 67
              |||||||||||||||||||
Sbjct: 116964 agcatccaacacccctcca 116946

>gb|AC168266.2| Mus musculus BAC clone RP24-245G1 from chromosome 9, complete sequence
          Length = 188778

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 49     agcatccaacacccctcca 67
              |||||||||||||||||||
Sbjct: 156014 agcatccaacacccctcca 156032


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,351,317
Number of Sequences: 3902068
Number of extensions: 1351317
Number of successful extensions: 87363
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 87307
Number of HSP's gapped (non-prelim): 56
length of query: 163
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 141
effective length of database: 17,147,199,772
effective search space: 2417755167852
effective search space used: 2417755167852
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)