Clone Name | rbastl53h09 |
---|---|
Clone Library Name | barley_pub |
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 61.9 bits (31), Expect = 1e-06 Identities = 128/156 (82%), Gaps = 12/156 (7%) Strand = Plus / Minus Query: 154 gcaggggagagcaaaatctgcacagggacgagtctacccaaatccttag--tttacacca 211 |||||||||| ||||||||||||||| |||||| |||||||||| ||| ||||| Sbjct: 9082615 gcaggggagaacaaaatctgcacaggt----gtctactcaaatccttaagtttttcacca 9082560 Query: 212 aacaaaaacg---ttgctactttctcc--tctgtaggatcgccaccaaaatttcatagcc 266 |||||||||| |||||||||||||| | ||| |||| ||||||||||||||| ||| Sbjct: 9082559 aacaaaaacggttttgctactttctcctttttgtgggatgaccaccaaaatttcat-gcc 9082501 Query: 267 ctggtaatacctacttagcctcagcgttgttatggc 302 || || |||||||| || ||||| |||||||||| Sbjct: 9082500 atgctaggacctacttcgcatcagccttgttatggc 9082465 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 67 ttatctctatgtacaaatcccaca 90 |||||| ||||||||||||||||| Sbjct: 9082715 ttatctttatgtacaaatcccaca 9082692
>dbj|AP001080.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0499C11 Length = 151369 Score = 61.9 bits (31), Expect = 1e-06 Identities = 128/156 (82%), Gaps = 12/156 (7%) Strand = Plus / Minus Query: 154 gcaggggagagcaaaatctgcacagggacgagtctacccaaatccttag--tttacacca 211 |||||||||| ||||||||||||||| |||||| |||||||||| ||| ||||| Sbjct: 111622 gcaggggagaacaaaatctgcacaggt----gtctactcaaatccttaagtttttcacca 111567 Query: 212 aacaaaaacg---ttgctactttctcc--tctgtaggatcgccaccaaaatttcatagcc 266 |||||||||| |||||||||||||| | ||| |||| ||||||||||||||| ||| Sbjct: 111566 aacaaaaacggttttgctactttctcctttttgtgggatgaccaccaaaatttcat-gcc 111508 Query: 267 ctggtaatacctacttagcctcagcgttgttatggc 302 || || |||||||| || ||||| |||||||||| Sbjct: 111507 atgctaggacctacttcgcatcagccttgttatggc 111472 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 67 ttatctctatgtacaaatcccaca 90 |||||| ||||||||||||||||| Sbjct: 111722 ttatctttatgtacaaatcccaca 111699
>dbj|AK121684.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033070C16, full insert sequence Length = 3448 Score = 61.9 bits (31), Expect = 1e-06 Identities = 128/156 (82%), Gaps = 12/156 (7%) Strand = Plus / Minus Query: 154 gcaggggagagcaaaatctgcacagggacgagtctacccaaatccttag--tttacacca 211 |||||||||| ||||||||||||||| |||||| |||||||||| ||| ||||| Sbjct: 3269 gcaggggagaacaaaatctgcacaggt----gtctactcaaatccttaagtttttcacca 3214 Query: 212 aacaaaaacg---ttgctactttctcc--tctgtaggatcgccaccaaaatttcatagcc 266 |||||||||| |||||||||||||| | ||| |||| ||||||||||||||| ||| Sbjct: 3213 aacaaaaacggttttgctactttctcctttttgtgggatgaccaccaaaatttcat-gcc 3155 Query: 267 ctggtaatacctacttagcctcagcgttgttatggc 302 || || |||||||| || ||||| |||||||||| Sbjct: 3154 atgctaggacctacttcgcatcagccttgttatggc 3119 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 67 ttatctctatgtacaaatcccaca 90 |||||| ||||||||||||||||| Sbjct: 3369 ttatctttatgtacaaatcccaca 3346
>emb|BX571698.15| Zebrafish DNA sequence from clone DKEYP-121E10 in linkage group 24, complete sequence Length = 168886 Score = 44.1 bits (22), Expect = 0.31 Identities = 22/22 (100%) Strand = Plus / Plus Query: 51 aataaaggcaattattttatct 72 |||||||||||||||||||||| Sbjct: 90667 aataaaggcaattattttatct 90688
>gb|AC099009.2| Drosophila melanogaster clone BACR17M11, complete sequence Length = 188872 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 317 ctcttgctgctactaccgacg 337 ||||||||||||||||||||| Sbjct: 32938 ctcttgctgctactaccgacg 32918
>ref|XM_595992.2| PREDICTED: Bos taurus similar to Receptor-type tyrosine-protein phosphatase T precursor (R-PTP-T) (RPTP-rho) (LOC517815), mRNA Length = 1560 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 241 aggatcgccaccaaaatttca 261 ||||||||||||||||||||| Sbjct: 205 aggatcgccaccaaaatttca 225
>emb|CR956613.2|RP43043M20 Pan troglodytes chromosome X BAC RP43-043M20, complete sequence Length = 81986 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 49 ttaataaaggcaattatttta 69 ||||||||||||||||||||| Sbjct: 37576 ttaataaaggcaattatttta 37596
>gb|AF406703.1| Solanum tuberosum BEL1-related homeotic protein 30 (Bel30) mRNA, complete cds Length = 2065 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 96 accatgaagctgatgtagaaa 116 ||||||||||||||||||||| Sbjct: 1579 accatgaagctgatgtagaaa 1599
>emb|AL109932.15|HSDJ770C6 Human DNA sequence from clone RP4-770C6 on chromosome 1, complete sequence Length = 99340 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 12 acatcattatgtctttttaac 32 ||||||||||||||||||||| Sbjct: 46542 acatcattatgtctttttaac 46522
>emb|AL109609.5|HSJ556A22 Human DNA sequence from clone RP4-556A22 on chromosome Xp21.1-21.3 Contains part of the DMD gene for dystrophin (muscular dystrophy, Duchenne and Becker types), complete sequence Length = 109098 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 49 ttaataaaggcaattatttta 69 ||||||||||||||||||||| Sbjct: 46685 ttaataaaggcaattatttta 46665
>emb|CR788312.9| Zebrafish DNA sequence from clone DKEY-192D9, complete sequence Length = 177966 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 106 tgatgtagaaaaagaagagaa 126 ||||||||||||||||||||| Sbjct: 115760 tgatgtagaaaaagaagagaa 115780
>emb|AL132978.1|ATF3A4 Arabidopsis thaliana DNA chromosome 3, BAC clone F3A4 Length = 108158 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 18 ttatgtctttttaactctata 38 ||||||||||||||||||||| Sbjct: 51015 ttatgtctttttaactctata 50995
>emb|BX537827.1|HSM805921 Homo sapiens genomic DNA; cDNA DKFZp686O13239 (from clone DKFZp686O13239) Length = 2517 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 12 acatcattatgtctttttaac 32 ||||||||||||||||||||| Sbjct: 760 acatcattatgtctttttaac 780
>gb|AC100852.2| Homo sapiens chromosome 17, clone RP11-125C16, complete sequence Length = 157980 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 60 aattattttatctctatgtac 80 ||||||||||||||||||||| Sbjct: 20999 aattattttatctctatgtac 21019
>tpg|BK003690.1| TPA: TPA_inf: Drosophila melanogaster HDC05448 (HDC05448) gene, complete cds Length = 1597 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 317 ctcttgctgctactaccgacg 337 ||||||||||||||||||||| Sbjct: 62 ctcttgctgctactaccgacg 42
>gb|AC006472.2|AC006472 Drosophila melanogaster, chromosome 2R, region 45E1-46A2, BAC clone BACR48G21, complete sequence Length = 156346 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 317 ctcttgctgctactaccgacg 337 ||||||||||||||||||||| Sbjct: 11715 ctcttgctgctactaccgacg 11735
>dbj|BA000016.3| Clostridium perfringens str. 13 DNA, complete genome Length = 3031430 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 11 aacatcattatgtctttttaa 31 ||||||||||||||||||||| Sbjct: 1572540 aacatcattatgtctttttaa 1572560
>gb|AE003832.4| Drosophila melanogaster chromosome 2R, section 18 of 73 of the complete sequence Length = 242171 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 317 ctcttgctgctactaccgacg 337 ||||||||||||||||||||| Sbjct: 31695 ctcttgctgctactaccgacg 31675
>gb|AC005894.1|AC005894 Drosophila melanogaster, chromosome 2R, region 46A1-46B2, P1 clones DS00050, DS00191, and DS05369, complete sequence Length = 196337 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 317 ctcttgctgctactaccgacg 337 ||||||||||||||||||||| Sbjct: 28361 ctcttgctgctactaccgacg 28341
>gb|DQ316259.1| Homo sapiens nemo like kinase (NLK) gene, complete cds Length = 158034 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 60 aattattttatctctatgtac 80 ||||||||||||||||||||| Sbjct: 14690 aattattttatctctatgtac 14710
>gb|AC110907.7| Mus musculus chromosome 7, clone RP24-180J10, complete sequence Length = 179750 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 60 aattattttatctctatgta 79 |||||||||||||||||||| Sbjct: 34285 aattattttatctctatgta 34304
>gb|AC186369.1| Pan troglodytes chromosome UNKNOWN clone CH251-21L17, complete sequence Length = 204239 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 115 aaaagaagagaaaatattcc 134 |||||||||||||||||||| Sbjct: 39412 aaaagaagagaaaatattcc 39431
>gb|AC122283.3| Mus musculus BAC clone RP23-242G6 from chromosome 10, complete sequence Length = 184346 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 108 atgtagaaaaagaagagaaa 127 |||||||||||||||||||| Sbjct: 63153 atgtagaaaaagaagagaaa 63172
>gb|AC125396.4| Mus musculus BAC clone RP24-69M4 from chromosome 16, complete sequence Length = 179186 Score = 40.1 bits (20), Expect = 4.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 114 aaaaagaagagaaaatattcctggacag 141 ||||||||||| || ||||||||||||| Sbjct: 110959 aaaaagaagaggaattattcctggacag 110986
>gb|AC073530.18| Homo sapiens 12 BAC RP11-123O10 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 156390 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 agaaaaagaagagaaaatat 131 |||||||||||||||||||| Sbjct: 146376 agaaaaagaagagaaaatat 146395
>gb|AC125521.4| Mus musculus BAC clone RP24-290D7 from chromosome 15, complete sequence Length = 185147 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 111 tagaaaaagaagagaaaata 130 |||||||||||||||||||| Sbjct: 18131 tagaaaaagaagagaaaata 18112
>gb|AC117624.10| Mus musculus chromosome 8, clone RP23-114M9, complete sequence Length = 207159 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 atagtttggctatttaataa 55 |||||||||||||||||||| Sbjct: 63981 atagtttggctatttaataa 63962
>gb|AC136740.10| Mus musculus chromosome 7, clone RP23-137A24, complete sequence Length = 219863 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 60 aattattttatctctatgta 79 |||||||||||||||||||| Sbjct: 197131 aattattttatctctatgta 197150
>gb|AC183612.3| Pan troglodytes BAC clone CH251-194C16 from chromosome 12, complete sequence Length = 135756 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 111 tagaaaaagaagagaaaata 130 |||||||||||||||||||| Sbjct: 45382 tagaaaaagaagagaaaata 45401
>gb|CP000300.1| Methanococcoides burtonii DSM 6242, complete genome Length = 2575032 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 111 tagaaaaagaagagaaaata 130 |||||||||||||||||||| Sbjct: 2373609 tagaaaaagaagagaaaata 2373590
>emb|AL358112.20| Human DNA sequence from clone RP11-311B1 on chromosome 6, complete sequence Length = 91161 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 111 tagaaaaagaagagaaaata 130 |||||||||||||||||||| Sbjct: 61578 tagaaaaagaagagaaaata 61597
>emb|AL162614.25| Human DNA sequence from clone RP1-220G17 on chromosome 11p12-14.1, complete sequence Length = 93100 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 gaaaaagaagagaaaatatt 132 |||||||||||||||||||| Sbjct: 72886 gaaaaagaagagaaaatatt 72867
>gb|AC104435.3| Homo sapiens chromosome 3 clone RP11-654C22, complete sequence Length = 197019 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 agaaaaagaagagaaaatat 131 |||||||||||||||||||| Sbjct: 48022 agaaaaagaagagaaaatat 48003
>emb|AL021069.1|HS970D1 Human DNA sequence from clone RP5-970D1 on chromosome 1q24 Contains the 3' end of a variant of the gene for expressed in hematopoietic cells (heart, liver) (HLL), complete sequence Length = 100496 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 111 tagaaaaagaagagaaaata 130 |||||||||||||||||||| Sbjct: 49010 tagaaaaagaagagaaaata 48991
>emb|AL596264.13| Mouse DNA sequence from clone RP23-232G8 on chromosome 11 Contains a novel gene, complete sequence Length = 175724 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 110 gtagaaaaagaagagaaaat 129 |||||||||||||||||||| Sbjct: 17387 gtagaaaaagaagagaaaat 17368
>emb|CR848813.6| Zebrafish DNA sequence from clone DKEY-260J20 in linkage group 5, complete sequence Length = 206722 Score = 40.1 bits (20), Expect = 4.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 108 atgtagaaaaagaagagaaaatattcct 135 ||||||||||||| ||| |||||||||| Sbjct: 180252 atgtagaaaaagaggaggaaatattcct 180225
>gb|AC015802.21| Homo sapiens chromosome 17, clone RP11-666A8, complete sequence Length = 205753 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 159 ggagagcaaaatctgcacag 178 |||||||||||||||||||| Sbjct: 30725 ggagagcaaaatctgcacag 30744
>gb|AC090137.4| Homo sapiens chromosome 8, clone RP11-56A10, complete sequence Length = 169989 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 6 atgaaaacatcattatgtcttttt 29 |||||||||||||||||| ||||| Sbjct: 150627 atgaaaacatcattatgtattttt 150650
>gb|AC097369.2| Homo sapiens chromosome 3 clone RP11-328N12, complete sequence Length = 203773 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 agaaaaagaagagaaaatat 131 |||||||||||||||||||| Sbjct: 121064 agaaaaagaagagaaaatat 121045
>emb|BX510369.6| Zebrafish DNA sequence from clone CH211-126I22 in linkage group 10, complete sequence Length = 168142 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 203 tttacaccaaacaaaaacgt 222 |||||||||||||||||||| Sbjct: 135746 tttacaccaaacaaaaacgt 135727
>gb|AC154824.2| Mus musculus BAC clone RP24-540A17 from chromosome 13, complete sequence Length = 164494 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 aaaacatcattatgtctttt 28 |||||||||||||||||||| Sbjct: 45857 aaaacatcattatgtctttt 45838
>gb|AC007707.14| Homo sapiens chromosome 11 clone rp11-442e11 map 11q23, complete sequence Length = 188963 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 115 aaaagaagagaaaatattcc 134 |||||||||||||||||||| Sbjct: 33004 aaaagaagagaaaatattcc 33023
>gb|AC019170.7| Homo sapiens BAC clone RP11-162G9 from 4, complete sequence Length = 185281 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 112 agaaaaagaagagaaaatattcct 135 |||||||||| ||||||||||||| Sbjct: 4249 agaaaaagaaaagaaaatattcct 4272
>gb|AC012670.7| Homo sapiens BAC clone RP11-514A9 from 2, complete sequence Length = 194725 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 agaaaaagaagagaaaatat 131 |||||||||||||||||||| Sbjct: 66206 agaaaaagaagagaaaatat 66187
>gb|AC152417.3| Mus musculus BAC clone RP23-56I21 from chromosome 10, complete sequence Length = 233783 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 108 atgtagaaaaagaagagaaa 127 |||||||||||||||||||| Sbjct: 5068 atgtagaaaaagaagagaaa 5049
>gb|AC005294.1| Homo sapiens 12 BAC GSHB-410F4 (Genome Systems Human Bac Library) complete sequence Length = 113762 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 111 tagaaaaagaagagaaaata 130 |||||||||||||||||||| Sbjct: 78926 tagaaaaagaagagaaaata 78945
>dbj|BS000243.1| Pan troglodytes chromosome 22 clone:CH251-388O03, map 22, complete sequences Length = 182350 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 111 tagaaaaagaagagaaaata 130 |||||||||||||||||||| Sbjct: 129025 tagaaaaagaagagaaaata 129006
>emb|AL954869.9| Mouse DNA sequence from clone RP23-477I13 on chromosome X, complete sequence Length = 159365 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 ttatctctatgtacaaatcc 86 |||||||||||||||||||| Sbjct: 11358 ttatctctatgtacaaatcc 11339
>gb|AC007214.13|AC007214 Pan troglodytes 12cp12 BAC RPCI43-135M19 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 154685 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 111 tagaaaaagaagagaaaata 130 |||||||||||||||||||| Sbjct: 109304 tagaaaaagaagagaaaata 109285
>emb|CT010447.23| Mouse DNA sequence from clone RP23-15K11 on chromosome 13, complete sequence Length = 239180 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 aaaacatcattatgtctttt 28 |||||||||||||||||||| Sbjct: 13883 aaaacatcattatgtctttt 13902
>dbj|AP000336.2| Homo sapiens genomic DNA, chromosome 21 clone:CMP21-S588, complete sequence Length = 37459 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 111 tagaaaaagaagagaaaata 130 |||||||||||||||||||| Sbjct: 1187 tagaaaaagaagagaaaata 1168
>dbj|AP001760.1| Homo sapiens genomic DNA, chromosome 21q, section 104/105 Length = 340000 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 111 tagaaaaagaagagaaaata 130 |||||||||||||||||||| Sbjct: 86663 tagaaaaagaagagaaaata 86644
>dbj|AP006216.1| Homo sapiens genomic DNA, chromosome 11, clone:RP11-87O6, complete sequence Length = 177334 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 115 aaaagaagagaaaatattcc 134 |||||||||||||||||||| Sbjct: 36382 aaaagaagagaaaatattcc 36401
>gb|AC004061.1|AC004061 Homo sapiens chromosome 4 clone B299F15 map 4q21, complete sequence Length = 117101 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 106 tgatgtagaaaaagaagaga 125 |||||||||||||||||||| Sbjct: 85446 tgatgtagaaaaagaagaga 85427
>gb|AC002037.1|AC002037 Human Chromosome 11 Overlapping Cosmids cSRL72g7 and cSRL140b8, complete sequence Length = 53897 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 115 aaaagaagagaaaatattcc 134 |||||||||||||||||||| Sbjct: 10204 aaaagaagagaaaatattcc 10185
>gb|AC096784.17| Mus musculus strain C57BL/6J chromosome 10 clone rp23-232l11, complete sequence Length = 202124 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 110 gtagaaaaagaagagaaaatattc 133 ||||||||||||||||||| |||| Sbjct: 153832 gtagaaaaagaagagaaaaaattc 153855
>dbj|AP000215.1| Homo sapiens genomic DNA, chromosome 21q22.3-ter, Ter region, clone f27E1-T1136, segment 1/4, complete sequence Length = 100000 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 111 tagaaaaagaagagaaaata 130 |||||||||||||||||||| Sbjct: 27204 tagaaaaagaagagaaaata 27185 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,216,228 Number of Sequences: 3902068 Number of extensions: 5216228 Number of successful extensions: 122922 Number of sequences better than 10.0: 57 Number of HSP's better than 10.0 without gapping: 57 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 122711 Number of HSP's gapped (non-prelim): 205 length of query: 360 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 338 effective length of database: 17,147,199,772 effective search space: 5795753522936 effective search space used: 5795753522936 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)