>DDB1_LYCES (Q6QNU4) DNA damage binding protein 1 (UV-damaged DNA-binding protein|
            1) (High pigmentation protein 1)
          Length = 1090

 Score = 40.8 bits (94), Expect = 8e-04
 Identities = 19/22 (86%), Positives = 21/22 (95%)
 Frame = -2

Query: 370  AKAMAVPVEELSKRVEELTRLH 305
            +KAM+VPVEEL KRVEELTRLH
Sbjct: 1069 SKAMSVPVEELMKRVEELTRLH 1090

>DDB1_LYCCS (Q6E7D1) DNA damage binding protein 1 (UV-damaged DNA-binding protein|
            1)
          Length = 1095

 Score = 40.8 bits (94), Expect = 8e-04
 Identities = 19/22 (86%), Positives = 21/22 (95%)
 Frame = -2

Query: 370  AKAMAVPVEELSKRVEELTRLH 305
            +KAM+VPVEEL KRVEELTRLH
Sbjct: 1074 SKAMSVPVEELMKRVEELTRLH 1095

>DDB1A_ARATH (Q9M0V3) DNA damage binding protein 1a (UV-damaged DNA-binding|
            protein 1a) (DDB1a)
          Length = 1088

 Score = 35.4 bits (80), Expect = 0.034
 Identities = 17/22 (77%), Positives = 19/22 (86%)
 Frame = -2

Query: 370  AKAMAVPVEELSKRVEELTRLH 305
            +K+M V VEEL KRVEELTRLH
Sbjct: 1067 SKSMNVQVEELCKRVEELTRLH 1088

>DDB1B_ARATH (O49552) DNA damage binding protein 1b (UV-damaged DNA-binding|
            protein 1b) (DDB1b)
          Length = 1088

 Score = 35.0 bits (79), Expect = 0.044
 Identities = 17/22 (77%), Positives = 18/22 (81%)
 Frame = -2

Query: 370  AKAMAVPVEELSKRVEELTRLH 305
            +K M V VEEL KRVEELTRLH
Sbjct: 1067 SKGMDVQVEELCKRVEELTRLH 1088

>HDC_HUMAN (Q9UBI9) Headcase protein homolog (hHDC)|
          Length = 543

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 16/38 (42%), Positives = 17/38 (44%), Gaps = 3/38 (7%)
 Frame = -1

Query: 365 GDGGPCRGAVQAGGGADETALGSA---VPCTSCFICSF 261
           G GG   GA  A   A   A G A    PC +  ICSF
Sbjct: 65  GAGGAGTGAANAAAAAGAAAAGDAKNEAPCATPLICSF 102

>G168_PARPR (P17053) G surface protein, allelic form 168 precursor|
          Length = 2704

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = +3

Query: 204  ATNTCRGSFSGRQRFTTQRKRTNKTGCTRHGAT*C 308
            A  TC   + G   +++      K GCT +GAT C
Sbjct: 1637 AATTCDAVYLGTGNYSSANCNEMKAGCTNNGATAC 1671

>TRX_DROVI (Q24742) Protein trithorax|
          Length = 3828

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = +3

Query: 90  VMFDNALLINNGDSPLK-FYISTDKVTLLSKSKTEKRNVATNTCRGS 227
           V F N L  ++  S +K FY   ++V L+S  K +  N   N CRGS
Sbjct: 394 VTFKNILETSDDKSVVKRFYNPDNRVPLVSIMKKDSLNRPLNYCRGS 440

>SREP_PENCH (Q92259) GATA factor SREP|
          Length = 532

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = -1

Query: 371 GQGDGGPCRGAVQAGGGADETALGSAVPCTSC 276
           G  +GG C+G+   GG  + T  G A  C  C
Sbjct: 154 GSSEGGGCKGSCPGGGSCNGT--GGAEGCDGC 183

>ZN569_MOUSE (Q80W31) Zinc finger protein 569 (Zinc finger protein 74) (Zfp-74)|
           (Mszf21)
          Length = 679

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 18/70 (25%), Positives = 31/70 (44%), Gaps = 9/70 (12%)
 Frame = +3

Query: 114 INNGDSPL------KFYISTDKVTLLSKSKTEKRNVATNTCRGSFSGRQRFTTQRK---R 266
           ++ G+ P       K +  +  +T+  +S T ++      CR SFS ++ F T +K   R
Sbjct: 368 VHTGEKPYECGECGKAFSQSSALTVHIRSHTGEKPYECKECRKSFSHKKNFITHQKIHTR 427

Query: 267 TNKTGCTRHG 296
               GC   G
Sbjct: 428 EKPYGCNECG 437

>FBX27_HUMAN (Q8NI29) F-box only protein 27 (F-box/G-domain protein 5)|
          Length = 283

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 5/45 (11%)
 Frame = -1

Query: 365 GDGGPCRGAVQAGGGA-----DETALGSAVPCTSCFICSFSLCCK 246
           G  G  +  VQ GG       + T +  A P  +CF+ SFS CCK
Sbjct: 120 GQEGLRKWMVQHGGDGWVVEENRTTVPGA-PSQTCFVTSFSWCCK 163

>ERG28_ARATH (O80594) Probable ergosterol biosynthetic protein 28|
          Length = 110

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 10/16 (62%), Positives = 13/16 (81%)
 Frame = -1

Query: 287 CTSCFICSFSLCCKPL 240
           CT CF+C+F+L  KPL
Sbjct: 55  CTLCFLCAFNLENKPL 70

>RPF53_MOUSE (Q8K202) DNA-directed RNA polymerase I-associated factor 53 kDa|
           subunit (EC 2.7.7.6) (RNA polymerase I-associated factor
           1)
          Length = 482

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 19/49 (38%), Positives = 23/49 (46%)
 Frame = +3

Query: 90  VMFDNALLINNGDSPLKFYISTDKVTLLSKSKTEKRNVATNTCRGSFSG 236
           V F N  L N GD     Y STD   L++  +   R VA  T R S+ G
Sbjct: 41  VQFSNGKLQNPGDMRFTLYNSTD---LVNPRQRSHRIVAAETDRLSYVG 86


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,948,736
Number of Sequences: 219361
Number of extensions: 900508
Number of successful extensions: 2556
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2479
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2552
length of database: 80,573,946
effective HSP length: 99
effective length of database: 58,857,207
effective search space used: 1412572968
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)