>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 53/57 (92%)
 Strand = Plus / Minus

                                                                         
Query: 280      ttttcagctgatcttggcatttcatcagaagttgtgctgcaagtacaggttctcctg 336
                |||||| ||| ||||| |||||||||||||||||||||||||||||||||| |||||
Sbjct: 24307141 ttttcaactgttcttgacatttcatcagaagttgtgctgcaagtacaggttttcctg 24307085



 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                           
Query: 148      aatctacaaagaaatgcctccagatgctaaaaatccttccagt 190
                ||||||||||||||||||||| | |||||||| | ||||||||
Sbjct: 24307331 aatctacaaagaaatgcctccggctgctaaaatttcttccagt 24307289

>gb|AC120505.7| Oryza sativa chromosome 3 BAC OSJNBa0066H15 genomic sequence, complete
             sequence
          Length = 171664

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 53/57 (92%)
 Strand = Plus / Plus

                                                                      
Query: 280   ttttcagctgatcttggcatttcatcagaagttgtgctgcaagtacaggttctcctg 336
             |||||| ||| ||||| |||||||||||||||||||||||||||||||||| |||||
Sbjct: 73483 ttttcaactgttcttgacatttcatcagaagttgtgctgcaagtacaggttttcctg 73539



 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                        
Query: 148   aatctacaaagaaatgcctccagatgctaaaaatccttccagt 190
             ||||||||||||||||||||| | |||||||| | ||||||||
Sbjct: 73293 aatctacaaagaaatgcctccggctgctaaaatttcttccagt 73335

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 53/57 (92%)
 Strand = Plus / Minus

                                                                         
Query: 280      ttttcagctgatcttggcatttcatcagaagttgtgctgcaagtacaggttctcctg 336
                |||||| ||| ||||| |||||||||||||||||||||||||||||||||| |||||
Sbjct: 24224610 ttttcaactgttcttgacatttcatcagaagttgtgctgcaagtacaggttttcctg 24224554



 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                           
Query: 148      aatctacaaagaaatgcctccagatgctaaaaatccttccagt 190
                ||||||||||||||||||||| | |||||||| | ||||||||
Sbjct: 24224800 aatctacaaagaaatgcctccggctgctaaaatttcttccagt 24224758

>dbj|AK101339.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033034J17, full
            insert sequence
          Length = 3772

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 53/57 (92%)
 Strand = Plus / Minus

                                                                     
Query: 280  ttttcagctgatcttggcatttcatcagaagttgtgctgcaagtacaggttctcctg 336
            |||||| ||| ||||| |||||||||||||||||||||||||||||||||| |||||
Sbjct: 3406 ttttcaactgttcttgacatttcatcagaagttgtgctgcaagtacaggttttcctg 3350



 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                       
Query: 148  aatctacaaagaaatgcctccagatgctaaaaatccttccagt 190
            ||||||||||||||||||||| | |||||||| | ||||||||
Sbjct: 3596 aatctacaaagaaatgcctccggctgctaaaatttcttccagt 3554

>dbj|AB057787.1| Oryza sativa OsCR4 gene, complete cds
          Length = 3859

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 53/57 (92%)
 Strand = Plus / Minus

                                                                     
Query: 280  ttttcagctgatcttggcatttcatcagaagttgtgctgcaagtacaggttctcctg 336
            |||||| ||| ||||| |||||||||||||||||||||||||||||||||| |||||
Sbjct: 3534 ttttcaactgttcttgacatttcatcagaagttgtgctgcaagtacaggttttcctg 3478



 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                       
Query: 148  aatctacaaagaaatgcctccagatgctaaaaatccttccagt 190
            ||||||||||||||||||||| | |||||||| | ||||||||
Sbjct: 3724 aatctacaaagaaatgcctccggctgctaaaatttcttccagt 3682

>gb|AY110360.1| Zea mays CL2011_1 mRNA sequence
          Length = 3324

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 35/36 (97%)
 Strand = Plus / Minus

                                                
Query: 298  atttcatcagaagttgtgctgcaagtacaggttctc 333
            ||||| ||||||||||||||||||||||||||||||
Sbjct: 2868 atttcttcagaagttgtgctgcaagtacaggttctc 2833

>gb|U67422.1|ZMU67422 Zea mays CRINKLY4 precursor (cr4) mRNA, complete cds
          Length = 3346

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 35/36 (97%)
 Strand = Plus / Minus

                                                
Query: 298  atttcatcagaagttgtgctgcaagtacaggttctc 333
            ||||| ||||||||||||||||||||||||||||||
Sbjct: 2868 atttcttcagaagttgtgctgcaagtacaggttctc 2833

>ref|XM_468998.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2706

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 32/33 (96%)
 Strand = Plus / Minus

                                             
Query: 304  tcagaagttgtgctgcaagtacaggttctcctg 336
            ||||||||||||||||||||||||||| |||||
Sbjct: 2706 tcagaagttgtgctgcaagtacaggttttcctg 2674

>gb|AY484589.1| Musa acuminata clone MuH9, genomic sequence
          Length = 82723

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                               
Query: 304   tcagaagttgtgctgcaagtacaggttctcctgt 337
             |||||||||||| |||||| |||| |||||||||
Sbjct: 38972 tcagaagttgtgttgcaagaacagattctcctgt 39005

>gb|AC010623.10| Homo sapiens chromosome 5 clone CTD-2093G19, complete sequence
          Length = 122505

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 297   catttcatcagaagttgtgctg 318
             ||||||||||||||||||||||
Sbjct: 43055 catttcatcagaagttgtgctg 43076

>gb|AC009393.5| Drosophila melanogaster clone BACR17F05, complete sequence
          Length = 198037

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 21    ttgcagggaaaccaacaacagaaag 45
             |||||||| ||||||||||||||||
Sbjct: 22317 ttgcagggcaaccaacaacagaaag 22341

>gb|AC018479.2|AC018479 Drosophila melanogaster, chromosome 3R, region 87D-87D, BAC clone
              BACR09O13, complete sequence
          Length = 174677

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 21     ttgcagggaaaccaacaacagaaag 45
              |||||||| ||||||||||||||||
Sbjct: 151921 ttgcagggcaaccaacaacagaaag 151945

>gb|AE003697.4| Drosophila melanogaster chromosome 3R, section 35 of 118 of the complete
              sequence
          Length = 221239

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 21     ttgcagggaaaccaacaacagaaag 45
              |||||||| ||||||||||||||||
Sbjct: 163610 ttgcagggcaaccaacaacagaaag 163634

>ref|NM_112562.3| Arabidopsis thaliana unknown protein AT3G16860 mRNA, complete cds
          Length = 2361

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 306  agaagttgtgctgcaagtac 325
            ||||||||||||||||||||
Sbjct: 1475 agaagttgtgctgcaagtac 1456

>emb|AJ781197.1| Influenza B virus (B/Hong Kong/330/01) partial PB2 gene for
           polymerase 2, genomic RNA, isolate B/Hong Kong/330/01
          Length = 2319

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 154 caaagaaatgcctccagatg 173
           ||||||||||||||||||||
Sbjct: 468 caaagaaatgcctccagatg 487

>emb|AJ781196.1| Influenza B virus (B/Trieste/28/02) partial PB2 gene for polymerase
           2, genomic RNA, isolate B/Trieste/28/02
          Length = 2298

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 154 caaagaaatgcctccagatg 173
           ||||||||||||||||||||
Sbjct: 447 caaagaaatgcctccagatg 466

>emb|AJ781192.1| Influenza B virus (B/Sichuan/379/99) partial PB2 gene for
           polymerase 2, genomic RNA, isolate B/Sichuan/379/99
          Length = 2319

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 154 caaagaaatgcctccagatg 173
           ||||||||||||||||||||
Sbjct: 468 caaagaaatgcctccagatg 487

>emb|Z75889.1|HS267P19 Human DNA sequence from clone RP1-267P19 on chromosome 13 Contains part
             of the gene for androgen-induced prostate proliferative
             shutoff associated protein (AS3) (CG008, FLJ23236,
             KIAA0979) and two CpG islands, complete sequence
          Length = 113704

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 33    caacaacagaaagacaacta 52
             ||||||||||||||||||||
Sbjct: 91568 caacaacagaaagacaacta 91549

>emb|AL049861.18|HSBK21C21 Human DNA sequence from clone CTA-21C21 on chromosome 1p22.2-31.1
             Contains STSs and GSSs, complete sequence
          Length = 143163

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 104   attccacttataaatacaag 123
             ||||||||||||||||||||
Sbjct: 65126 attccacttataaatacaag 65107

>gb|AC161258.2| Mus musculus BAC clone RP23-457H24 from chromosome 17, complete sequence
          Length = 201842

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 152    tacaaagaaatgcctccaga 171
              ||||||||||||||||||||
Sbjct: 100627 tacaaagaaatgcctccaga 100608

>gb|AC104819.4| Homo sapiens BAC clone RP11-731D1 from 4, complete sequence
          Length = 129203

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 228   ccaaagcaacaggtcacaaa 247
             ||||||||||||||||||||
Sbjct: 93753 ccaaagcaacaggtcacaaa 93772

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 145      atcaatctacaaagaaatgc 164
                ||||||||||||||||||||
Sbjct: 26177782 atcaatctacaaagaaatgc 26177763

>emb|BX823830.1|CNS0A7F9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS80ZD01 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 2270

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 306  agaagttgtgctgcaagtac 325
            ||||||||||||||||||||
Sbjct: 1474 agaagttgtgctgcaagtac 1455

>gb|AC068196.4| Homo sapiens BAC clone RP11-685J19 from 2, complete sequence
          Length = 162566

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 155    aaagaaatgcctccagatgctaaaaatc 182
              |||||||||||||| |||| ||||||||
Sbjct: 115825 aaagaaatgcctcctgatgttaaaaatc 115852

>dbj|AP004868.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0048B08
          Length = 146874

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 145   atcaatctacaaagaaatgc 164
             ||||||||||||||||||||
Sbjct: 74609 atcaatctacaaagaaatgc 74590

>dbj|AP007203.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2,
           BAC clone:OSJNBb0012J10
          Length = 132375

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 145 atcaatctacaaagaaatgc 164
           ||||||||||||||||||||
Sbjct: 623 atcaatctacaaagaaatgc 604

>gb|AY504607.1| Influenza B virus (B/Hong Kong/330/2001) basic polymerase subunit 2
           (PB2) gene, complete cds
          Length = 2396

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 154 caaagaaatgcctccagatg 173
           ||||||||||||||||||||
Sbjct: 482 caaagaaatgcctccagatg 501

>gb|AY377788.1| Leishmania donovani promastigote IFN-gamma release-inducing antigen,
            complete sequence
          Length = 1953

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 25   agggaaaccaacaacagaaagaca 48
            ||||||| ||||||||||||||||
Sbjct: 1295 agggaaaacaacaacagaaagaca 1318

>gb|AY504615.1| Influenza B virus (B/Hong Kong/330/2001 egg adapted) basic
           polymerase subunit 2 (PB2) gene, complete cds
          Length = 2396

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 154 caaagaaatgcctccagatg 173
           ||||||||||||||||||||
Sbjct: 482 caaagaaatgcctccagatg 501

>dbj|AP001308.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone:MUH15
          Length = 11291

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 306  agaagttgtgctgcaagtac 325
            ||||||||||||||||||||
Sbjct: 3352 agaagttgtgctgcaagtac 3371

>emb|Y14424.1|ATSEB2 Arabidopsis thaliana mRNA for hypothetical protein SEB2, partial
          Length = 1244

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 306 agaagttgtgctgcaagtac 325
           ||||||||||||||||||||
Sbjct: 382 agaagttgtgctgcaagtac 363

>emb|AL353724.11| Human DNA sequence from clone RP11-448I13 on chromosome 13, complete
              sequence
          Length = 120652

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 33     caacaacagaaagacaacta 52
              ||||||||||||||||||||
Sbjct: 110707 caacaacagaaagacaacta 110688

>emb|AL731706.14| Mouse DNA sequence from clone RP23-199B10 on chromosome 2, complete
              sequence
          Length = 195301

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 91     atcaactgtggccattccac 110
              ||||||||||||||||||||
Sbjct: 146227 atcaactgtggccattccac 146208

>gb|AC102860.13| Mus musculus chromosome 3, clone RP24-511H12, complete sequence
          Length = 202315

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 306   agaagttgtgctgcaagtacaggt 329
             ||||||||||||| ||||||||||
Sbjct: 72030 agaagttgtgctgaaagtacaggt 72053


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,188,282
Number of Sequences: 3902068
Number of extensions: 3188282
Number of successful extensions: 60740
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 60633
Number of HSP's gapped (non-prelim): 107
length of query: 337
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 315
effective length of database: 17,147,199,772
effective search space: 5401367928180
effective search space used: 5401367928180
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)