>COCA1_HUMAN (Q99715) Collagen alpha-1(XII) chain precursor|
          Length = 3063

 Score = 28.5 bits (62), Expect = 5.0
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = +2

Query: 77   SDTSSKTLFFISNSTTLLTKMIT*NFQVIYDLLRGSCHPVH 199
            +D SSKTL F +  T    + +T + + +  L  GS H VH
Sbjct: 2612 ADPSSKTLSFFNKDTRGEVQTVTFDTEEVKTLFYGSFHKVH 2652

>COCA1_MOUSE (Q60847) Collagen alpha-1(XII) chain precursor|
          Length = 3119

 Score = 27.7 bits (60), Expect = 8.5
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = +2

Query: 77   SDTSSKTLFFISNSTTLLTKMIT*NFQVIYDLLRGSCHPVH 199
            +D SSKTL F +  T    + +T +   +  L  GS H VH
Sbjct: 2617 ADPSSKTLSFFNKDTRGEVQTVTFDTDEVKTLFYGSFHKVH 2657


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,826,353
Number of Sequences: 219361
Number of extensions: 462322
Number of successful extensions: 1043
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1041
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1043
length of database: 80,573,946
effective HSP length: 45
effective length of database: 70,702,701
effective search space used: 1696864824
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)