Clone Name | rbastl53g10 |
---|---|
Clone Library Name | barley_pub |
>gb|AC148455.2| Xenopus tropicalis clone CH216-165I8, complete sequence Length = 170350 Score = 42.1 bits (21), Expect = 0.68 Identities = 21/21 (100%) Strand = Plus / Plus Query: 126 tgctcacaaaaatgatcacat 146 ||||||||||||||||||||| Sbjct: 107305 tgctcacaaaaatgatcacat 107325
>gb|AC135806.4| Mus musculus BAC clone RP24-289M10 from chromosome 18, complete sequence Length = 179327 Score = 42.1 bits (21), Expect = 0.68 Identities = 21/21 (100%) Strand = Plus / Plus Query: 151 cttccaagttatatatgatct 171 ||||||||||||||||||||| Sbjct: 140500 cttccaagttatatatgatct 140520
>gb|AC124548.5| Mus musculus BAC clone RP23-276P11 from 18, complete sequence Length = 173805 Score = 42.1 bits (21), Expect = 0.68 Identities = 21/21 (100%) Strand = Plus / Plus Query: 151 cttccaagttatatatgatct 171 ||||||||||||||||||||| Sbjct: 69345 cttccaagttatatatgatct 69365
>gb|AC004629.1| Homo sapiens chromosome 5, BAC clone 87L18 (LBNL H97), complete sequence Length = 116019 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 gaaatggggaaaatcacatt 77 |||||||||||||||||||| Sbjct: 3853 gaaatggggaaaatcacatt 3872
>emb|BX908806.20| Zebrafish DNA sequence from clone DKEY-43A14 in linkage group 17, complete sequence Length = 67753 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 aaaatcacattcagatacat 86 |||||||||||||||||||| Sbjct: 64714 aaaatcacattcagatacat 64733
>emb|AL591852.10| Human DNA sequence from clone RP11-249H20 on chromosome 9 Contains part of the DAPK1 gene for death-assodeath-associated protein kinase 1, complete sequence Length = 72904 Score = 40.1 bits (20), Expect = 2.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 26 attgtaggacaataaaaaccgagttcca 53 ||||||||||||| ||||||||| |||| Sbjct: 8212 attgtaggacaattaaaaccgagatcca 8185
>gb|DQ436495.1| Homo sapiens death-associated protein kinase 1 (DAPK1) gene, complete cds Length = 212999 Score = 40.1 bits (20), Expect = 2.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 26 attgtaggacaataaaaaccgagttcca 53 ||||||||||||| ||||||||| |||| Sbjct: 81018 attgtaggacaattaaaaccgagatcca 80991
>gb|AC106781.2| Homo sapiens chromosome 5 clone RP11-346A9, complete sequence Length = 179284 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 gaaatggggaaaatcacatt 77 |||||||||||||||||||| Sbjct: 117210 gaaatggggaaaatcacatt 117191
>emb|AL806515.7| Mouse DNA sequence from clone RP23-434M18 on chromosome X, complete sequence Length = 125394 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 ccatcctgttcatttccagc 206 |||||||||||||||||||| Sbjct: 22962 ccatcctgttcatttccagc 22943
>emb|CR383683.17| Zebrafish DNA sequence from clone DKEY-114C3 in linkage group 22, complete sequence Length = 153095 Score = 40.1 bits (20), Expect = 2.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 54 tgttgaaatggggaaaatcacatt 77 |||||||||||||||||| ||||| Sbjct: 57746 tgttgaaatggggaaaattacatt 57723
>gb|AC118935.7| Mus musculus chromosome 5, clone RP24-172P15, complete sequence Length = 168119 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 atgatcacatgaaacttcca 156 |||||||||||||||||||| Sbjct: 159834 atgatcacatgaaacttcca 159815
>dbj|AP005061.3| Homo sapiens genomic DNA, chromosome 18 clone:RP11-419P8, complete sequence Length = 186074 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 tcagatacatcatcaaaaac 96 |||||||||||||||||||| Sbjct: 23511 tcagatacatcatcaaaaac 23530
>gb|AC135015.3| Mus musculus BAC clone RP24-227L14 from 8, complete sequence Length = 169193 Score = 40.1 bits (20), Expect = 2.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 57 tgaaatggggaaaatcacattcag 80 ||||||||||||||||| |||||| Sbjct: 85330 tgaaatggggaaaatcaaattcag 85307
>gb|AC116763.11| Mus musculus chromosome 5, clone RP23-385G21, complete sequence Length = 196521 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 atgatcacatgaaacttcca 156 |||||||||||||||||||| Sbjct: 167589 atgatcacatgaaacttcca 167608
>dbj|AP005136.2| Homo sapiens genomic DNA, chromosome 18 clone:RP11-715F3, complete sequence Length = 174547 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 tcagatacatcatcaaaaac 96 |||||||||||||||||||| Sbjct: 88691 tcagatacatcatcaaaaac 88710
>emb|AL844483.5| Mouse DNA sequence from clone RP23-245N10 on chromosome X, complete sequence Length = 106787 Score = 40.1 bits (20), Expect = 2.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 cagttctgcatcaattattc 25 |||||||||||||||||||| Sbjct: 87238 cagttctgcatcaattattc 87219 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,505,273 Number of Sequences: 3902068 Number of extensions: 2505273 Number of successful extensions: 181025 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 16 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 180982 Number of HSP's gapped (non-prelim): 43 length of query: 211 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 189 effective length of database: 17,147,199,772 effective search space: 3240820756908 effective search space used: 3240820756908 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)