Clone Name | rbastl53g05 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | YG3K_YEAST (P48235) Hypothetical 24.0 kDa protein in MOL1-NAT2 i... | 29 | 2.5 | 2 | CGEE_BACSU (P42093) Protein cgeE | 28 | 4.2 |
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>YG3K_YEAST (P48235) Hypothetical 24.0 kDa protein in MOL1-NAT2 intergenic| region Length = 211 Score = 29.3 bits (64), Expect = 2.5 Identities = 12/26 (46%), Positives = 18/26 (69%) Frame = -2 Query: 344 FMDYTTVCSCWVFTIPEKTSLTSQKI 267 F DY TVC + T P+KT++ ++KI Sbjct: 5 FNDYCTVCDRLIPTSPQKTNINTRKI 30
>CGEE_BACSU (P42093) Protein cgeE| Length = 259 Score = 28.5 bits (62), Expect = 4.2 Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 2/70 (2%) Frame = +2 Query: 50 PFVETYILFIFS*YSQLSYSIPVVCMTLHVNSETNTMIL--YALTYQ*TVK*FGSSTMPK 223 PF E I+ + YS + +P+ C L ++ + T + A+ Q K +GS + + Sbjct: 153 PFYEADIIILVVCYSDQAQKVPIGCGELFIDHQEKTAKIEEVAILDQFQRKGYGSILVKE 212 Query: 224 YLEIKKNPGV 253 L I K+ G+ Sbjct: 213 MLSIAKSLGM 222 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 50,077,805 Number of Sequences: 219361 Number of extensions: 897805 Number of successful extensions: 1332 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 1325 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1332 length of database: 80,573,946 effective HSP length: 95 effective length of database: 59,734,651 effective search space used: 1433631624 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)