Clone Name	rbastl53g03
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	gb|BT016256.1| Zea mays clone Contig89 mRNA sequence	149	9e-33
2	ref|XM_466019.1| Oryza sativa (japonica cultivar-group), mRNA	133	5e-28
3	gb|AY320037.1| Oryza sativa (japonica cultivar-group) RNA bindin...	133	5e-28
4	gb|AY320036.1| Oryza sativa (japonica cultivar-group) RNA bindin...	133	5e-28
5	dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D...	133	5e-28
6	dbj|AP004772.3| Oryza sativa (japonica cultivar-group) genomic D...	133	5e-28
7	dbj|AP005749.3| Oryza sativa (japonica cultivar-group) genomic D...	133	5e-28
8	dbj|AK065061.1| Oryza sativa (japonica cultivar-group) cDNA clon...	133	5e-28
9	dbj|AK063159.1| Oryza sativa (japonica cultivar-group) cDNA clon...	133	5e-28
10	gb|AY112472.1| Zea mays CL152_1 mRNA sequence	78	3e-11
11	gb|AC092827.8| Homo sapiens 12p BAC RP11-186N14 (Roswell Park Ca...	44	0.39
12	emb|AL772362.8| Zebrafish DNA sequence from clone CH211-173K16 i...	44	0.39
13	gb|AC113028.15| Mus musculus chromosome 5, clone RP23-205D3, com...	42	1.5
14	gb|AC119906.6| Mus musculus chromosome 5, clone RP24-239D13, com...	42	1.5
15	emb|BX629357.1|CNS09SBV Tetraodon nigroviridis BAC sequence	42	1.5
16	emb|AL671881.8| Mouse DNA sequence from clone RP23-206E1 on chro...	42	1.5
17	ref|NM_102108.2| Arabidopsis thaliana unknown protein AT1G22610 ...	40	6.1
18	gb|BC061968.1| Rattus norvegicus ATPase, Na+/K+ transporting, al...	40	6.1
19	gb|AC149483.1| Populus trichocarpa clone Pop1-69I13, complete se...	40	6.1
20	gb|AC117215.3| Mus musculus BAC clone RP23-308M1 from 7, complet...	40	6.1
21	emb|AL354711.24| Human DNA sequence from clone RP11-340N12 on ch...	40	6.1
22	emb|AL139192.8| Human DNA sequence from clone RP11-515I23 on chr...	40	6.1
23	gb|AY080693.1| Arabidopsis thaliana At1g22610 mRNA sequence	40	6.1
24	emb|BX323825.19| Zebrafish DNA sequence from clone DKEYP-51B2 in...	40	6.1
25	emb|CR938710.1| Medicago truncatula chromosome 5 clone mth2-170k...	40	6.1
26	emb|X53234.1|RNNKAA1B Rat NKAA1 gene for Na+/K+ -ATPase alpha1 s...	40	6.1
27	gb|AC104455.2| Homo sapiens chromosome 1 clone RP4-682E18, compl...	40	6.1
28	ref|NM_012504.1| Rattus norvegicus ATPase, Na+/K+ transporting, ...	40	6.1
29	gb|AC079389.2| Rattus norvegicus strain Brown Norway chromosome ...	40	6.1
30	gb|AC006551.6|AC006551 Arabidopsis thaliana chromosome I BAC F12...	40	6.1
31	gb|AF115319.1|AF115319 Mus musculus Ucp2 gene, promoter sequence	40	6.1
32	emb|BX465852.6| Zebrafish DNA sequence from clone CH211-139A5 in...	40	6.1
33	emb|BX815537.1|CNS0AEKP Arabidopsis thaliana Full-length cDNA Co...	40	6.1
34	gb|AC064837.6| Homo sapiens BAC clone RP11-693G13 from 2, comple...	40	6.1
35	gb|AC017081.8| Homo sapiens BAC clone RP11-470J24 from 2, comple...	40	6.1
36	gb|AC104792.5| Homo sapiens BAC clone RP11-202B22 from 2, comple...	40	6.1
37	gb|AC112484.8| Homo sapiens 3 BAC RP11-723O4 (Roswell Park Cance...	40	6.1
38	emb|BX908726.21| Zebrafish DNA sequence from clone DKEY-74I2 in ...	40	6.1
39	emb|X05882.1|RNATPAR Rat mRNA for sodium/potassium-transporting ...	40	6.1
40	dbj|AP002428.3| Homo sapiens genomic DNA, chromosome 11q clone:R...	40	6.1
41	dbj|AP000923.5| Homo sapiens genomic DNA, chromosome 11q, clone:...	40	6.1
42	gb|AC139317.4| Mus musculus BAC clone RP24-495N6 from 15, comple...	40	6.1
43	gb|AC151839.2| Mus musculus BAC clone RP23-191M5 from 7, complet...	40	6.1
44	gb|AC147742.13| Mus musculus chromosome 7, clone RP23-202M23, co...	40	6.1
45	gb|M28647.1|RATNALPH1 Rattus norvegicus Na,K-ATPase alpha-1 subu...	40	6.1
46	gb|M14511.1|RATATPA1 Rat Na+,K+-ATPase alpha isoform catalytic s...	40	6.1

---

>gb|BT016256.1| Zea mays clone Contig89 mRNA sequence
          Length = 1657

 Score =  149 bits (75), Expect = 9e-33
 Identities = 114/127 (89%)
 Strand = Plus / Minus

                                                                        
Query: 311  tgctcttcctcgtcggattcaacgtctccatactgccacaggcgcagcctttccttcttc 370
            ||||| |||||||| |||||||| ||||| |||||||| |  ||||||||||||||||| 
Sbjct: 1350 tgctcgtcctcgtccgattcaacatctccgtactgccaaatccgcagcctttccttcttt 1291

                                                                        
Query: 371  gccttctcctggaactgttccaggttctcgagagctgtcttcctctcctttgtgtcccat 430
            ||||| |||||||||||||||||||||| |||||| |||||||||||| | |||||||||
Sbjct: 1290 gccttgtcctggaactgttccaggttctggagagccgtcttcctctccctagtgtcccat 1231

                   
Query: 431  ctcttgc 437
            |||||||
Sbjct: 1230 ctcttgc 1224

---

>ref|XM_466019.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3549

 Score =  133 bits (67), Expect = 5e-28
 Identities = 118/135 (87%)
 Strand = Plus / Minus

                                                                        
Query: 303  ctggagcttgctcttcctcgtcggattcaacgtctccatactgccacaggcgcagccttt 362
            |||||||||||||||||||||| |||||||| || ||||||||||| |   |||||||||
Sbjct: 3153 ctggagcttgctcttcctcgtcagattcaacatcaccatactgccagatctgcagccttt 3094

                                                                        
Query: 363  ccttcttcgccttctcctggaactgttccaggttctcgagagctgtcttcctctcctttg 422
            ||||||| || |||||||||||||||||||| |||| |||||| | ||| |||||| | |
Sbjct: 3093 ccttctttgctttctcctggaactgttccagattctggagagcagcctttctctccctag 3034

                           
Query: 423  tgtcccatctcttgc 437
            | |||||||||||||
Sbjct: 3033 tatcccatctcttgc 3019



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 106  ttattgagcttaggggaaaaacaatgtat 134
            ||||| || ||||||||||||||||||||
Sbjct: 3443 ttattaagtttaggggaaaaacaatgtat 3415

---

>gb|AY320037.1| Oryza sativa (japonica cultivar-group) RNA binding protein Rp120
            gene, complete cds
          Length = 5478

 Score =  133 bits (67), Expect = 5e-28
 Identities = 118/135 (87%)
 Strand = Plus / Minus

                                                                        
Query: 303  ctggagcttgctcttcctcgtcggattcaacgtctccatactgccacaggcgcagccttt 362
            |||||||||||||||||||||| |||||||| || ||||||||||| |   |||||||||
Sbjct: 5271 ctggagcttgctcttcctcgtcagattcaacatcaccatactgccagatctgcagccttt 5212

                                                                        
Query: 363  ccttcttcgccttctcctggaactgttccaggttctcgagagctgtcttcctctcctttg 422
            ||||||| || |||||||||||||||||||| |||| |||||| | ||| |||||| | |
Sbjct: 5211 ccttctttgctttctcctggaactgttccagattctggagagcagcctttctctccctag 5152

                           
Query: 423  tgtcccatctcttgc 437
            | |||||||||||||
Sbjct: 5151 tatcccatctcttgc 5137

---

>gb|AY320036.1| Oryza sativa (japonica cultivar-group) RNA binding protein Rp120
            mRNA, complete cds
          Length = 2961

 Score =  133 bits (67), Expect = 5e-28
 Identities = 118/135 (87%)
 Strand = Plus / Minus

                                                                        
Query: 303  ctggagcttgctcttcctcgtcggattcaacgtctccatactgccacaggcgcagccttt 362
            |||||||||||||||||||||| |||||||| || ||||||||||| |   |||||||||
Sbjct: 2932 ctggagcttgctcttcctcgtcagattcaacatcaccatactgccagatctgcagccttt 2873

                                                                        
Query: 363  ccttcttcgccttctcctggaactgttccaggttctcgagagctgtcttcctctcctttg 422
            ||||||| || |||||||||||||||||||| |||| |||||| | ||| |||||| | |
Sbjct: 2872 ccttctttgctttctcctggaactgttccagattctggagagcagcctttctctccctag 2813

                           
Query: 423  tgtcccatctcttgc 437
            | |||||||||||||
Sbjct: 2812 tatcccatctcttgc 2798

---

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  133 bits (67), Expect = 5e-28
 Identities = 118/135 (87%)
 Strand = Plus / Plus

                                                                            
Query: 303      ctggagcttgctcttcctcgtcggattcaacgtctccatactgccacaggcgcagccttt 362
                |||||||||||||||||||||| |||||||| || ||||||||||| |   |||||||||
Sbjct: 19118661 ctggagcttgctcttcctcgtcagattcaacatcaccatactgccagatctgcagccttt 19118720

                                                                            
Query: 363      ccttcttcgccttctcctggaactgttccaggttctcgagagctgtcttcctctcctttg 422
                ||||||| || |||||||||||||||||||| |||| |||||| | ||| |||||| | |
Sbjct: 19118721 ccttctttgctttctcctggaactgttccagattctggagagcagcctttctctccctag 19118780

                               
Query: 423      tgtcccatctcttgc 437
                | |||||||||||||
Sbjct: 19118781 tatcccatctcttgc 19118795



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                             
Query: 106      ttattgagcttaggggaaaaacaatgtat 134
                ||||| || ||||||||||||||||||||
Sbjct: 19118371 ttattaagtttaggggaaaaacaatgtat 19118399

---

>dbj|AP004772.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0415B12
          Length = 157419

 Score =  133 bits (67), Expect = 5e-28
 Identities = 118/135 (87%)
 Strand = Plus / Plus

                                                                         
Query: 303   ctggagcttgctcttcctcgtcggattcaacgtctccatactgccacaggcgcagccttt 362
             |||||||||||||||||||||| |||||||| || ||||||||||| |   |||||||||
Sbjct: 16910 ctggagcttgctcttcctcgtcagattcaacatcaccatactgccagatctgcagccttt 16969

                                                                         
Query: 363   ccttcttcgccttctcctggaactgttccaggttctcgagagctgtcttcctctcctttg 422
             ||||||| || |||||||||||||||||||| |||| |||||| | ||| |||||| | |
Sbjct: 16970 ccttctttgctttctcctggaactgttccagattctggagagcagcctttctctccctag 17029

                            
Query: 423   tgtcccatctcttgc 437
             | |||||||||||||
Sbjct: 17030 tatcccatctcttgc 17044



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 106   ttattgagcttaggggaaaaacaatgtat 134
             ||||| || ||||||||||||||||||||
Sbjct: 16620 ttattaagtttaggggaaaaacaatgtat 16648

---

>dbj|AP005749.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0047A17
          Length = 149142

 Score =  133 bits (67), Expect = 5e-28
 Identities = 118/135 (87%)
 Strand = Plus / Plus

                                                                          
Query: 303    ctggagcttgctcttcctcgtcggattcaacgtctccatactgccacaggcgcagccttt 362
              |||||||||||||||||||||| |||||||| || ||||||||||| |   |||||||||
Sbjct: 124182 ctggagcttgctcttcctcgtcagattcaacatcaccatactgccagatctgcagccttt 124241

                                                                          
Query: 363    ccttcttcgccttctcctggaactgttccaggttctcgagagctgtcttcctctcctttg 422
              ||||||| || |||||||||||||||||||| |||| |||||| | ||| |||||| | |
Sbjct: 124242 ccttctttgctttctcctggaactgttccagattctggagagcagcctttctctccctag 124301

                             
Query: 423    tgtcccatctcttgc 437
              | |||||||||||||
Sbjct: 124302 tatcccatctcttgc 124316



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 106    ttattgagcttaggggaaaaacaatgtat 134
              ||||| || ||||||||||||||||||||
Sbjct: 123892 ttattaagtttaggggaaaaacaatgtat 123920

---

>dbj|AK065061.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001J15, full
            insert sequence
          Length = 3547

 Score =  133 bits (67), Expect = 5e-28
 Identities = 118/135 (87%)
 Strand = Plus / Minus

                                                                        
Query: 303  ctggagcttgctcttcctcgtcggattcaacgtctccatactgccacaggcgcagccttt 362
            |||||||||||||||||||||| |||||||| || ||||||||||| |   |||||||||
Sbjct: 3151 ctggagcttgctcttcctcgtcagattcaacatcaccatactgccagatctgcagccttt 3092

                                                                        
Query: 363  ccttcttcgccttctcctggaactgttccaggttctcgagagctgtcttcctctcctttg 422
            ||||||| || |||||||||||||||||||| |||| |||||| | ||| |||||| | |
Sbjct: 3091 ccttctttgctttctcctggaactgttccagattctggagagcagcctttctctccctag 3032

                           
Query: 423  tgtcccatctcttgc 437
            | |||||||||||||
Sbjct: 3031 tatcccatctcttgc 3017



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 106  ttattgagcttaggggaaaaacaatgtat 134
            ||||| || ||||||||||||||||||||
Sbjct: 3441 ttattaagtttaggggaaaaacaatgtat 3413

---

>dbj|AK063159.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-D08, full
            insert sequence
          Length = 1551

 Score =  133 bits (67), Expect = 5e-28
 Identities = 118/135 (87%)
 Strand = Plus / Minus

                                                                        
Query: 303  ctggagcttgctcttcctcgtcggattcaacgtctccatactgccacaggcgcagccttt 362
            |||||||||||||||||||||| |||||||| || ||||||||||| |   |||||||||
Sbjct: 1169 ctggagcttgctcttcctcgtcagattcaacatcaccatactgccagatctgcagccttt 1110

                                                                        
Query: 363  ccttcttcgccttctcctggaactgttccaggttctcgagagctgtcttcctctcctttg 422
            ||||||| || |||||||||||||||||||| |||| |||||| | ||| |||||| | |
Sbjct: 1109 ccttctttgctttctcctggaactgttccagattctggagagcagcctttctctccctag 1050

                           
Query: 423  tgtcccatctcttgc 437
            | |||||||||||||
Sbjct: 1049 tatcccatctcttgc 1035



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 106  ttattgagcttaggggaaaaacaatgtat 134
            ||||| || ||||||||||||||||||||
Sbjct: 1459 ttattaagtttaggggaaaaacaatgtat 1431

---

>gb|AY112472.1| Zea mays CL152_1 mRNA sequence
          Length = 1436

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 51/55 (92%)
 Strand = Plus / Minus

                                                                  
Query: 383 aactgttccaggttctcgagagctgtcttcctctcctttgtgtcccatctcttgc 437
           |||||||||||||||| |||||| |||||||||||| | ||||||||||||||||
Sbjct: 976 aactgttccaggttctggagagccgtcttcctctccctagtgtcccatctcttgc 922

---

>gb|AC092827.8| Homo sapiens 12p BAC RP11-186N14 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 117636

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 123   aaaacaatgtatatagttctct 144
             ||||||||||||||||||||||
Sbjct: 97578 aaaacaatgtatatagttctct 97599

---

>emb|AL772362.8| Zebrafish DNA sequence from clone CH211-173K16 in linkage group 13,
              complete sequence
          Length = 165993

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 187    ttcatataagctctcgactgagtttc 212
              |||||||| |||||||||||||||||
Sbjct: 151331 ttcatatatgctctcgactgagtttc 151306

---

>gb|AC113028.15| Mus musculus chromosome 5, clone RP23-205D3, complete sequence
          Length = 275646

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 106    ttattgagcttaggggaaaaa 126
              |||||||||||||||||||||
Sbjct: 246866 ttattgagcttaggggaaaaa 246886

---

>gb|AC119906.6| Mus musculus chromosome 5, clone RP24-239D13, complete sequence
          Length = 257203

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 106   ttattgagcttaggggaaaaa 126
             |||||||||||||||||||||
Sbjct: 88447 ttattgagcttaggggaaaaa 88467

---

>emb|BX629357.1|CNS09SBV Tetraodon nigroviridis BAC sequence
          Length = 168910

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 174    ttcttactaagttttcatata 194
              |||||||||||||||||||||
Sbjct: 141218 ttcttactaagttttcatata 141198

---

>emb|AL671881.8| Mouse DNA sequence from clone RP23-206E1 on chromosome X, complete
              sequence
          Length = 195413

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 86     gtccacaaaggacacagacct 106
              |||||||||||||||||||||
Sbjct: 152418 gtccacaaaggacacagacct 152438

---

>ref|NM_102108.2| Arabidopsis thaliana unknown protein AT1G22610 mRNA, complete cds
          Length = 3295

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 314 tcttcctcgtcggattcaacgtctccat 341
           ||||| ||||||| ||||||||||||||
Sbjct: 755 tcttcttcgtcggcttcaacgtctccat 728

---

>gb|BC061968.1| Rattus norvegicus ATPase, Na+/K+ transporting, alpha 1 polypeptide,
           mRNA (cDNA clone MGC:72546 IMAGE:5598014), complete cds
          Length = 3700

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 358 cctttccttcttcgccttct 377
           ||||||||||||||||||||
Sbjct: 338 cctttccttcttcgccttct 319

---

>gb|AC149483.1| Populus trichocarpa clone Pop1-69I13, complete sequence
          Length = 51685

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 121   gaaaaacaatgtatatagttctct 144
             |||||||||| |||||||||||||
Sbjct: 28326 gaaaaacaatatatatagttctct 28303

---

>gb|AC117215.3| Mus musculus BAC clone RP23-308M1 from 7, complete sequence
          Length = 192092

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 133   atatagttctcttcttctaatggc 156
             |||| |||||||||||||||||||
Sbjct: 99542 atatggttctcttcttctaatggc 99565

---

>emb|AL354711.24| Human DNA sequence from clone RP11-340N12 on chromosome 9 Contains the 3'
              end of a novel gene (FLJ25636) and the 5' end of a novel
              gene (FLJ20276), complete sequence
          Length = 162126

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 10     ttccaatcctgaatttaatttcca 33
              |||||||||||||||| |||||||
Sbjct: 145724 ttccaatcctgaatttcatttcca 145701

---

>emb|AL139192.8| Human DNA sequence from clone RP11-515I23 on chromosome Xq13.2-21.2
             Contains the 5' end of a novel gene, complete sequence
          Length = 94056

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 413   ctctcctttgtgtcccatct 432
             ||||||||||||||||||||
Sbjct: 81672 ctctcctttgtgtcccatct 81691

---

>gb|AY080693.1| Arabidopsis thaliana At1g22610 mRNA sequence
          Length = 1920

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 314 tcttcctcgtcggattcaacgtctccat 341
           ||||| ||||||| ||||||||||||||
Sbjct: 746 tcttcttcgtcggcttcaacgtctccat 719

---

>emb|BX323825.19| Zebrafish DNA sequence from clone DKEYP-51B2 in linkage group 5, complete
              sequence
          Length = 185915

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 157    ataaatatagtctctctttc 176
              ||||||||||||||||||||
Sbjct: 181778 ataaatatagtctctctttc 181797

---

>emb|CR938710.1| Medicago truncatula chromosome 5 clone mth2-170k9, COMPLETE SEQUENCE
          Length = 123977

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 367   cttcgccttctcctggaactgttccaggttct 398
             |||| |||||||||||||||  ||||||||||
Sbjct: 51074 cttcaccttctcctggaactcctccaggttct 51105

---

>emb|X53234.1|RNNKAA1B Rat NKAA1 gene for Na+/K+ -ATPase alpha1 subunit exon 2
          Length = 1813

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 358  cctttccttcttcgccttct 377
            ||||||||||||||||||||
Sbjct: 1771 cctttccttcttcgccttct 1752

---

>gb|AC104455.2| Homo sapiens chromosome 1 clone RP4-682E18, complete sequence
          Length = 125123

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 130   tgtatatagttctcttcttc 149
             ||||||||||||||||||||
Sbjct: 87138 tgtatatagttctcttcttc 87157

---

>ref|NM_012504.1| Rattus norvegicus ATPase, Na+/K+ transporting, alpha 1 polypeptide
           (Atp1a1), mRNA
          Length = 3636

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 358 cctttccttcttcgccttct 377
           ||||||||||||||||||||
Sbjct: 327 cctttccttcttcgccttct 308

---

>gb|AC079389.2| Rattus norvegicus strain Brown Norway chromosome 6 clone RP31-263K14,
             complete sequence
          Length = 151836

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 123   aaaacaatgtatatagttct 142
             ||||||||||||||||||||
Sbjct: 34730 aaaacaatgtatatagttct 34711

---

>gb|AC006551.6|AC006551 Arabidopsis thaliana chromosome I BAC F12K8 genomic sequence, complete
             sequence
          Length = 107200

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 314   tcttcctcgtcggattcaacgtctccat 341
             ||||| ||||||| ||||||||||||||
Sbjct: 12990 tcttcttcgtcggcttcaacgtctccat 13017

---

>gb|AF115319.1|AF115319 Mus musculus Ucp2 gene, promoter sequence
          Length = 7342

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 133  atatagttctcttcttctaatggc 156
            |||| |||||||||||||||||||
Sbjct: 3933 atatggttctcttcttctaatggc 3910

---

>emb|BX465852.6| Zebrafish DNA sequence from clone CH211-139A5 in linkage group 5,
             complete sequence
          Length = 160041

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 157   ataaatatagtctctctttc 176
             ||||||||||||||||||||
Sbjct: 88307 ataaatatagtctctctttc 88326

---

>emb|BX815537.1|CNS0AEKP Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS70ZB10 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 2808

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 314 tcttcctcgtcggattcaacgtctccat 341
           ||||| ||||||| ||||||||||||||
Sbjct: 687 tcttcttcgtcggcttcaacgtctccat 660

---

>gb|AC064837.6| Homo sapiens BAC clone RP11-693G13 from 2, complete sequence
          Length = 111857

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 145   tcttctaatggcataaatat 164
             ||||||||||||||||||||
Sbjct: 84384 tcttctaatggcataaatat 84403

---

>gb|AC017081.8| Homo sapiens BAC clone RP11-470J24 from 2, complete sequence
          Length = 149462

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 222   ccaaaactttcatatctaaa 241
             ||||||||||||||||||||
Sbjct: 29599 ccaaaactttcatatctaaa 29580

---

>gb|AC104792.5| Homo sapiens BAC clone RP11-202B22 from 2, complete sequence
          Length = 53135

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 427   ccatctcttgcccctttcag 446
             ||||||||||||||||||||
Sbjct: 45555 ccatctcttgcccctttcag 45574

---

>gb|AC112484.8| Homo sapiens 3 BAC RP11-723O4 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 185470

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 218   gtgtccaaaactttcatatc 237
             ||||||||||||||||||||
Sbjct: 41312 gtgtccaaaactttcatatc 41293

---

>emb|BX908726.21| Zebrafish DNA sequence from clone DKEY-74I2 in linkage group 22,
             complete sequence
          Length = 180599

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 402   gagctgtcttcctctccttt 421
             ||||||||||||||||||||
Sbjct: 92306 gagctgtcttcctctccttt 92287

---

>emb|X05882.1|RNATPAR Rat mRNA for sodium/potassium-transporting ATPase alpha-1 chain
           precursor (atp1a1 gene)
          Length = 3407

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 358 cctttccttcttcgccttct 377
           ||||||||||||||||||||
Sbjct: 104 cctttccttcttcgccttct 85

---

>dbj|AP002428.3| Homo sapiens genomic DNA, chromosome 11q clone:RP11-99C10, complete
              sequences
          Length = 175110

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 225    aaactttcatatctaaacca 244
              ||||||||||||||||||||
Sbjct: 139050 aaactttcatatctaaacca 139031

---

>dbj|AP000923.5| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-752D5, complete
             sequences
          Length = 170973

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 225   aaactttcatatctaaacca 244
             ||||||||||||||||||||
Sbjct: 31136 aaactttcatatctaaacca 31117

---

>gb|AC139317.4| Mus musculus BAC clone RP24-495N6 from 15, complete sequence
          Length = 182415

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 360   tttccttcttcgccttctcc 379
             ||||||||||||||||||||
Sbjct: 98222 tttccttcttcgccttctcc 98203

---

>gb|AC151839.2| Mus musculus BAC clone RP23-191M5 from 7, complete sequence
          Length = 232568

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 133   atatagttctcttcttctaatggc 156
             |||| |||||||||||||||||||
Sbjct: 42584 atatggttctcttcttctaatggc 42607

---

>gb|AC147742.13| Mus musculus chromosome 7, clone RP23-202M23, complete sequence
          Length = 194167

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 133   atatagttctcttcttctaatggc 156
             |||| |||||||||||||||||||
Sbjct: 78320 atatggttctcttcttctaatggc 78343

---

>gb|M28647.1|RATNALPH1 Rattus norvegicus Na,K-ATPase alpha-1 subunit mRNA, complete cds
          Length = 3599

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 358 cctttccttcttcgccttct 377
           ||||||||||||||||||||
Sbjct: 350 cctttccttcttcgccttct 331

---

>gb|M14511.1|RATATPA1 Rat Na+,K+-ATPase alpha isoform catalytic subunit mRNA, complete
           cds
          Length = 3636

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 358 cctttccttcttcgccttct 377
           ||||||||||||||||||||
Sbjct: 327 cctttccttcttcgccttct 308


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,022,747
Number of Sequences: 3902068
Number of extensions: 5022747
Number of successful extensions: 92944
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 92809
Number of HSP's gapped (non-prelim): 135
length of query: 452
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 430
effective length of database: 17,147,199,772
effective search space: 7373295901960
effective search space used: 7373295901960
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---