Clone Name | rbastl53g01 |
---|---|
Clone Library Name | barley_pub |
>GL33_ARATH (P94072) Germin-like protein subfamily 3 member 3 precursor| (AtGER3) (AtGLP2) Length = 211 Score = 52.8 bits (125), Expect = 2e-07 Identities = 25/41 (60%), Positives = 31/41 (75%) Frame = -1 Query: 358 AVALVAFSGPNPGLQITDYALFANNLPSAVVEKVTFLDDAQ 236 A+A VAF +PGLQI +ALFAN+LPS +VE TFL DA+ Sbjct: 159 ALAFVAFGSSSPGLQILPFALFANDLPSELVEATTFLSDAE 199
>AB19A_PRUPE (Q9ZRA4) Auxin-binding protein ABP19a precursor| Length = 209 Score = 52.0 bits (123), Expect = 4e-07 Identities = 23/41 (56%), Positives = 32/41 (78%) Frame = -1 Query: 358 AVALVAFSGPNPGLQITDYALFANNLPSAVVEKVTFLDDAQ 236 A+A +FS P+PGLQI D+ALF N+LP+ ++ + TFLD AQ Sbjct: 157 ALAFPSFSSPSPGLQILDFALFKNDLPTELIAQTTFLDAAQ 197
>GLP1_SINAL (P45854) Germin-like protein 1 precursor| Length = 211 Score = 50.8 bits (120), Expect = 8e-07 Identities = 24/41 (58%), Positives = 30/41 (73%) Frame = -1 Query: 358 AVALVAFSGPNPGLQITDYALFANNLPSAVVEKVTFLDDAQ 236 A+A VAF +PGLQI +ALFAN+LPS +VE TFL D + Sbjct: 159 ALAFVAFGSSSPGLQILPFALFANDLPSELVEATTFLSDEE 199
>GL31_ARATH (P94040) Germin-like protein subfamily 3 member 1 precursor| (AtGER1) (At-GERM1) (AtGLP1) Length = 208 Score = 50.8 bits (120), Expect = 8e-07 Identities = 24/40 (60%), Positives = 31/40 (77%) Frame = -1 Query: 364 SAAVALVAFSGPNPGLQITDYALFANNLPSAVVEKVTFLD 245 S+A A+V F+ NPGLQI D+ALFAN+LP+ +V TFLD Sbjct: 154 SSASAVVTFNSANPGLQILDFALFANSLPTELVVGTTFLD 193
>ABP20_PRUPE (O04011) Auxin-binding protein ABP20 precursor| Length = 214 Score = 49.3 bits (116), Expect = 2e-06 Identities = 22/41 (53%), Positives = 30/41 (73%) Frame = -1 Query: 358 AVALVAFSGPNPGLQITDYALFANNLPSAVVEKVTFLDDAQ 236 A+A +F +PGLQI D+ALF N+LP+ V+ + TFLD AQ Sbjct: 162 ALAFASFGSASPGLQILDFALFKNDLPTEVIAQTTFLDAAQ 202
>GLP1_BRANA (P46271) Germin-like protein 1 precursor| Length = 207 Score = 46.2 bits (108), Expect = 2e-05 Identities = 23/40 (57%), Positives = 27/40 (67%) Frame = -1 Query: 358 AVALVAFSGPNPGLQITDYALFANNLPSAVVEKVTFLDDA 239 A ALV FS +PGLQI D+ALFAN L + +V TFL A Sbjct: 155 AAALVTFSSASPGLQILDFALFANTLSTELVSATTFLPPA 194
>AB19B_PRUPE (O04012) Auxin-binding protein ABP19b precursor| Length = 209 Score = 45.8 bits (107), Expect = 3e-05 Identities = 20/41 (48%), Positives = 29/41 (70%) Frame = -1 Query: 358 AVALVAFSGPNPGLQITDYALFANNLPSAVVEKVTFLDDAQ 236 A+A +FS P+PGLQI D+ALF N+L + ++ + T LD Q Sbjct: 157 AIAFPSFSSPSPGLQIVDFALFKNDLATELIAQTTLLDAPQ 197
>TRUB_DESDG (Q30WI7) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 309 Score = 28.9 bits (63), Expect = 3.2 Identities = 12/31 (38%), Positives = 19/31 (61%) Frame = +2 Query: 251 EGDLLNHGGWQVVGEERVVSDLEAWVGAAER 343 EG+ L+ W V EE VV ++ W G++E+ Sbjct: 90 EGETLSTADWTHVTEEDVVRAVDLWTGSSEQ 120 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 40,467,803 Number of Sequences: 219361 Number of extensions: 545488 Number of successful extensions: 1282 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 1254 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1282 length of database: 80,573,946 effective HSP length: 96 effective length of database: 59,515,290 effective search space used: 1428366960 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)