Clone Name | rbastl53g01 |
---|---|
Clone Library Name | barley_pub |
>emb|Y15962.1|HVGLP1 Hordeum vulgare mRNA for germin-like protein 1 Length = 833 Score = 597 bits (301), Expect = e-167 Identities = 311/313 (99%), Gaps = 1/313 (0%) Strand = Plus / Minus Query: 53 ttgacaatcatcaaatgaaattgatatgaaaaattaaacacaacttgaaa-cagactcgg 111 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 814 ttgacaatcatcaaatgaaattgatatgaaaaattaaacacaacttgaaatcagactcgg 755 Query: 112 agttgacctcacaagcgcacgaacacatgcatcaaattaaaccgacacgctgacaccacg 171 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 754 agttgacctcacaagcgcacgaacacatgcatcaaattaaaccgacacgctgacaccacg 695 Query: 172 acgacctttgctgagaactgcttaattagccgctgccgccgagcacggacttgagcttct 231 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 694 acgacctttgctgagaactgcttaattagccgctgccgccgagcacggacttgagcttct 635 Query: 232 tcacctgcgcgtcgtccaagaaggtgaccttctcaaccacggcggatggcaggttgttgg 291 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 634 tcacctgcgcgtcgtccaagaaggtgaccttctcaacgacggcggatggcaggttgttgg 575 Query: 292 cgaagagcgcgtagtcagtgatctggaggcctgggttggggccgctgaacgcaacgagcg 351 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 574 cgaagagcgcgtagtcagtgatctggaggcctgggttggggccgctgaacgcaacgagcg 515 Query: 352 ctaccgccgcgga 364 ||||||||||||| Sbjct: 514 ctaccgccgcgga 502
>emb|AJ291451.1|HVU291451 Hordeum vulgare mRNA for adenosine diphosphate glucose pyrophosphatase (sagppase gene) Length = 639 Score = 313 bits (158), Expect = 2e-82 Identities = 161/162 (99%) Strand = Plus / Minus Query: 197 ttagccgctgccgccgagcacggacttgagcttcttcacctgcgcgtcgtccaagaaggt 256 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 639 ttagccgctgccgccgagcacggacttgagcttcttcacctgcgcgtcgtccaagaaggt 580 Query: 257 gaccttctcaaccacggcggatggcaggttgttggcgaagagcgcgtagtcagtgatctg 316 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 579 gaccttctcaacgacggcggatggcaggttgttggcgaagagcgcgtagtcagtgatctg 520 Query: 317 gaggcctgggttggggccgctgaacgcaacgagcgctaccgc 358 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 519 gaggcctgggttggggccgctgaacgcaacgagcgctaccgc 478
>emb|AJ319659.1|TAE319659 Triticum aestivum mRNA for adenosine diphosphate glucose pyrophosphatase Length = 642 Score = 281 bits (142), Expect = 8e-73 Identities = 157/162 (96%) Strand = Plus / Minus Query: 197 ttagccgctgccgccgagcacggacttgagcttcttcacctgcgcgtcgtccaagaaggt 256 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 642 ttagccgctgccgccgagcacggacttgagcttcttcacctgcgcgtcgtccaagaaggt 583 Query: 257 gaccttctcaaccacggcggatggcaggttgttggcgaagagcgcgtagtcagtgatctg 316 |||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 582 gaccttctcaacgacggcggacggcaggttgttggcgaagagcgcgtagtcagtgatctg 523 Query: 317 gaggcctgggttggggccgctgaacgcaacgagcgctaccgc 358 ||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 522 caggccggggttggggccgctgaacgcaacgagcgccaccgc 481
>ref|XM_482788.1| Oryza sativa (japonica cultivar-group), mRNA Length = 938 Score = 224 bits (113), Expect = 2e-55 Identities = 149/161 (92%) Strand = Plus / Minus Query: 201 ccgctgccgccgagcacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgacc 260 ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 739 ccgctaccgccgaggacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgacc 680 Query: 261 ttctcaaccacggcggatggcaggttgttggcgaagagcgcgtagtcagtgatctggagg 320 ||||| || | |||||| |||||||||||||||||||| |||||||| |||||||||||| Sbjct: 679 ttctcgacgatggcggacggcaggttgttggcgaagagggcgtagtcggtgatctggagg 620 Query: 321 cctgggttggggccgctgaacgcaacgagcgctaccgccgc 361 || ||||||||||||||||| || |||||||| |||||||| Sbjct: 619 ccggggttggggccgctgaaggcgacgagcgccaccgccgc 579
>ref|XM_507258.1| PREDICTED Oryza sativa (japonica cultivar-group), P0493A04.40 mRNA Length = 994 Score = 224 bits (113), Expect = 2e-55 Identities = 149/161 (92%) Strand = Plus / Minus Query: 201 ccgctgccgccgagcacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgacc 260 ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 728 ccgctaccgccgaggacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgacc 669 Query: 261 ttctcaaccacggcggatggcaggttgttggcgaagagcgcgtagtcagtgatctggagg 320 ||||| || | |||||| |||||||||||||||||||| |||||||| |||||||||||| Sbjct: 668 ttctcgacgatggcggacggcaggttgttggcgaagagggcgtagtcggtgatctggagg 609 Query: 321 cctgggttggggccgctgaacgcaacgagcgctaccgccgc 361 || ||||||||||||||||| || |||||||| |||||||| Sbjct: 608 ccggggttggggccgctgaaggcgacgagcgccaccgccgc 568
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 224 bits (113), Expect = 2e-55 Identities = 149/161 (92%) Strand = Plus / Plus Query: 201 ccgctgccgccgagcacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgacc 260 ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22551065 ccgctaccgccgaggacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgacc 22551124 Query: 261 ttctcaaccacggcggatggcaggttgttggcgaagagcgcgtagtcagtgatctggagg 320 ||||| || | |||||| |||||||||||||||||||| |||||||| |||||||||||| Sbjct: 22551125 ttctcgacgatggcggacggcaggttgttggcgaagagggcgtagtcggtgatctggagg 22551184 Query: 321 cctgggttggggccgctgaacgcaacgagcgctaccgccgc 361 || ||||||||||||||||| || |||||||| |||||||| Sbjct: 22551185 ccggggttggggccgctgaaggcgacgagcgccaccgccgc 22551225 Score = 60.0 bits (30), Expect = 5e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 279 ggcaggttgttggcgaagagcgcgtagtcagtgatctggaggcctgggtt 328 ||||||||||||||||||||||||||||| |||||| ||||| ||||| Sbjct: 22546182 ggcaggttgttggcgaagagcgcgtagtcgaggatctgcaggccggggtt 22546231
>dbj|AP004707.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0690E03 Length = 139924 Score = 224 bits (113), Expect = 2e-55 Identities = 149/161 (92%) Strand = Plus / Plus Query: 201 ccgctgccgccgagcacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgacc 260 ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 24566 ccgctaccgccgaggacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgacc 24625 Query: 261 ttctcaaccacggcggatggcaggttgttggcgaagagcgcgtagtcagtgatctggagg 320 ||||| || | |||||| |||||||||||||||||||| |||||||| |||||||||||| Sbjct: 24626 ttctcgacgatggcggacggcaggttgttggcgaagagggcgtagtcggtgatctggagg 24685 Query: 321 cctgggttggggccgctgaacgcaacgagcgctaccgccgc 361 || ||||||||||||||||| || |||||||| |||||||| Sbjct: 24686 ccggggttggggccgctgaaggcgacgagcgccaccgccgc 24726 Score = 60.0 bits (30), Expect = 5e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 279 ggcaggttgttggcgaagagcgcgtagtcagtgatctggaggcctgggtt 328 ||||||||||||||||||||||||||||| |||||| ||||| ||||| Sbjct: 19683 ggcaggttgttggcgaagagcgcgtagtcgaggatctgcaggccggggtt 19732
>dbj|AP004586.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0493A04 Length = 149367 Score = 224 bits (113), Expect = 2e-55 Identities = 149/161 (92%) Strand = Plus / Plus Query: 201 ccgctgccgccgagcacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgacc 260 ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 145993 ccgctaccgccgaggacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgacc 146052 Query: 261 ttctcaaccacggcggatggcaggttgttggcgaagagcgcgtagtcagtgatctggagg 320 ||||| || | |||||| |||||||||||||||||||| |||||||| |||||||||||| Sbjct: 146053 ttctcgacgatggcggacggcaggttgttggcgaagagggcgtagtcggtgatctggagg 146112 Query: 321 cctgggttggggccgctgaacgcaacgagcgctaccgccgc 361 || ||||||||||||||||| || |||||||| |||||||| Sbjct: 146113 ccggggttggggccgctgaaggcgacgagcgccaccgccgc 146153 Score = 60.0 bits (30), Expect = 5e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 279 ggcaggttgttggcgaagagcgcgtagtcagtgatctggaggcctgggtt 328 ||||||||||||||||||||||||||||| |||||| ||||| ||||| Sbjct: 141110 ggcaggttgttggcgaagagcgcgtagtcgaggatctgcaggccggggtt 141159
>dbj|AK104729.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-C02, full insert sequence Length = 938 Score = 224 bits (113), Expect = 2e-55 Identities = 149/161 (92%) Strand = Plus / Minus Query: 201 ccgctgccgccgagcacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgacc 260 ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 739 ccgctaccgccgaggacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgacc 680 Query: 261 ttctcaaccacggcggatggcaggttgttggcgaagagcgcgtagtcagtgatctggagg 320 ||||| || | |||||| |||||||||||||||||||| |||||||| |||||||||||| Sbjct: 679 ttctcgacgatggcggacggcaggttgttggcgaagagggcgtagtcggtgatctggagg 620 Query: 321 cctgggttggggccgctgaacgcaacgagcgctaccgccgc 361 || ||||||||||||||||| || |||||||| |||||||| Sbjct: 619 ccggggttggggccgctgaaggcgacgagcgccaccgccgc 579
>dbj|AK065284.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002M08, full insert sequence Length = 994 Score = 224 bits (113), Expect = 2e-55 Identities = 149/161 (92%) Strand = Plus / Minus Query: 201 ccgctgccgccgagcacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgacc 260 ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 728 ccgctaccgccgaggacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgacc 669 Query: 261 ttctcaaccacggcggatggcaggttgttggcgaagagcgcgtagtcagtgatctggagg 320 ||||| || | |||||| |||||||||||||||||||| |||||||| |||||||||||| Sbjct: 668 ttctcgacgatggcggacggcaggttgttggcgaagagggcgtagtcggtgatctggagg 609 Query: 321 cctgggttggggccgctgaacgcaacgagcgctaccgccgc 361 || ||||||||||||||||| || |||||||| |||||||| Sbjct: 608 ccggggttggggccgctgaaggcgacgagcgccaccgccgc 568
>gb|AF051156.1|AF051156 Oryza sativa germin-like protein (GLP110) mRNA, complete cds Length = 1004 Score = 224 bits (113), Expect = 2e-55 Identities = 149/161 (92%) Strand = Plus / Minus Query: 201 ccgctgccgccgagcacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgacc 260 ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 720 ccgctaccgccgaggacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgacc 661 Query: 261 ttctcaaccacggcggatggcaggttgttggcgaagagcgcgtagtcagtgatctggagg 320 ||||| || | |||||| |||||||||||||||||||| |||||||| |||||||||||| Sbjct: 660 ttctcgacgatggcggacggcaggttgttggcgaagagggcgtagtcggtgatctggagg 601 Query: 321 cctgggttggggccgctgaacgcaacgagcgctaccgccgc 361 || ||||||||||||||||| || |||||||| |||||||| Sbjct: 600 ccggggttggggccgctgaaggcgacgagcgccaccgccgc 560
>gb|AF032975.1|AF032975 Oryza sativa germin-like protein 5 (GER5) mRNA, complete cds Length = 1030 Score = 224 bits (113), Expect = 2e-55 Identities = 149/161 (92%) Strand = Plus / Minus Query: 201 ccgctgccgccgagcacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgacc 260 ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 741 ccgctaccgccgaggacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgacc 682 Query: 261 ttctcaaccacggcggatggcaggttgttggcgaagagcgcgtagtcagtgatctggagg 320 ||||| || | |||||| |||||||||||||||||||| |||||||| |||||||||||| Sbjct: 681 ttctcgacgatggcggacggcaggttgttggcgaagagggcgtagtcggtgatctggagg 622 Query: 321 cctgggttggggccgctgaacgcaacgagcgctaccgccgc 361 || ||||||||||||||||| || |||||||| |||||||| Sbjct: 621 ccggggttggggccgctgaaggcgacgagcgccaccgccgc 581
>dbj|AB015593.1| Oryza sativa OsGLP1 gene for germin-like protein 1, complete cds Length = 642 Score = 224 bits (113), Expect = 2e-55 Identities = 149/161 (92%) Strand = Plus / Minus Query: 201 ccgctgccgccgagcacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgacc 260 ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 638 ccgctaccgccgaggacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgacc 579 Query: 261 ttctcaaccacggcggatggcaggttgttggcgaagagcgcgtagtcagtgatctggagg 320 ||||| || | |||||| |||||||||||||||||||| |||||||| |||||||||||| Sbjct: 578 ttctcgacgatggcggacggcaggttgttggcgaagagggcgtagtcggtgatctggagg 519 Query: 321 cctgggttggggccgctgaacgcaacgagcgctaccgccgc 361 || ||||||||||||||||| || |||||||| |||||||| Sbjct: 518 ccggggttggggccgctgaaggcgacgagcgccaccgccgc 478
>dbj|AB010876.1| Oryza sativa OsGLP1 mRNA for germin-like protein 1, complete cds Length = 994 Score = 184 bits (93), Expect = 1e-43 Identities = 144/161 (89%) Strand = Plus / Minus Query: 201 ccgctgccgccgagcacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgacc 260 ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 740 ccgctaccgccgaggacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgacc 681 Query: 261 ttctcaaccacggcggatggcaggttgttggcgaagagcgcgtagtcagtgatctggagg 320 ||||| || | |||||| |||||||||||||||||||| |||||||| | ||||| || Sbjct: 680 ttctcgacgatggcggacggcaggttgttggcgaagagggcgtagtcgttaatctgaagc 621 Query: 321 cctgggttggggccgctgaacgcaacgagcgctaccgccgc 361 || ||||||||||||||||| | |||||||| |||||||| Sbjct: 620 ccggggttggggccgctgaagccgacgagcgccaccgccgc 580
>gb|AY394010.1| Zea mays germin-like protein (glp1) gene, promoter region and complete cds Length = 2490 Score = 168 bits (85), Expect = 8e-39 Identities = 133/149 (89%) Strand = Plus / Minus Query: 201 ccgctgccgccgagcacggacttgagcttcttcacctgcgcgtcgtccaagaaggtgacc 260 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 2089 ccgctgccgccgagcacactcttgagcttcttcacctgcgcgtcgtccaagaaggtgacc 2030 Query: 261 ttctcaaccacggcggatggcaggttgttggcgaagagcgcgtagtcagtgatctggagg 320 ||||| || |||||||| || ||||||||||| |||||||| |||| |||||||| ||| Sbjct: 2029 ttctccacgacggcggacgggaggttgttggcaaagagcgcaaagtcggtgatctgcagg 1970 Query: 321 cctgggttggggccgctgaacgcaacgag 349 || |||||||||| |||||| || ||||| Sbjct: 1969 ccggggttggggctgctgaaggcgacgag 1941
>gb|AY112552.1| Zea mays CL11523_1 mRNA sequence Length = 544 Score = 119 bits (60), Expect = 7e-24 Identities = 99/112 (88%) Strand = Plus / Plus Query: 238 gcgcgtcgtccaagaaggtgaccttctcaaccacggcggatggcaggttgttggcgaaga 297 |||||||||||||||||||||||||||| || |||||||| || ||||||||||| |||| Sbjct: 366 gcgcgtcgtccaagaaggtgaccttctccacgacggcggacgggaggttgttggcaaaga 425 Query: 298 gcgcgtagtcagtgatctggaggcctgggttggggccgctgaacgcaacgag 349 |||| |||| |||||||| ||||| |||||||||| |||||| || ||||| Sbjct: 426 gcgcaaagtcggtgatctgcaggccggggttggggctgctgaaggcgacgag 477
>ref|XM_482785.1| Oryza sativa (japonica cultivar-group), mRNA Length = 660 Score = 60.0 bits (30), Expect = 5e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 279 ggcaggttgttggcgaagagcgcgtagtcagtgatctggaggcctgggtt 328 ||||||||||||||||||||||||||||| |||||| ||||| ||||| Sbjct: 578 ggcaggttgttggcgaagagcgcgtagtcgaggatctgcaggccggggtt 529
>ref|XM_471594.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1299 Score = 46.1 bits (23), Expect = 0.078 Identities = 32/35 (91%) Strand = Plus / Minus Query: 282 aggttgttggcgaagagcgcgtagtcagtgatctg 316 ||||||||||||||||||||| |||| ||||||| Sbjct: 581 aggttgttggcgaagagcgcgaagtccatgatctg 547
>emb|AL731615.4|OSJN00256 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0065J03, complete sequence Length = 144146 Score = 46.1 bits (23), Expect = 0.078 Identities = 32/35 (91%) Strand = Plus / Minus Query: 282 aggttgttggcgaagagcgcgtagtcagtgatctg 316 ||||||||||||||||||||| |||| ||||||| Sbjct: 38184 aggttgttggcgaagagcgcgaagtccatgatctg 38150
>gb|AC018509.6| Homo sapiens chromosome 10 clone RP11-307B23, complete sequence Length = 162877 Score = 46.1 bits (23), Expect = 0.078 Identities = 23/23 (100%) Strand = Plus / Plus Query: 64 caaatgaaattgatatgaaaaat 86 ||||||||||||||||||||||| Sbjct: 144794 caaatgaaattgatatgaaaaat 144816
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 46.1 bits (23), Expect = 0.078 Identities = 32/35 (91%) Strand = Plus / Plus Query: 282 aggttgttggcgaagagcgcgtagtcagtgatctg 316 ||||||||||||||||||||| |||| ||||||| Sbjct: 12556041 aggttgttggcgaagagcgcgaagtccatgatctg 12556075
>gb|AC137000.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0035I01, complete sequence Length = 147813 Score = 44.1 bits (22), Expect = 0.31 Identities = 22/22 (100%) Strand = Plus / Plus Query: 69 gaaattgatatgaaaaattaaa 90 |||||||||||||||||||||| Sbjct: 3137 gaaattgatatgaaaaattaaa 3158
>gb|AC148171.16| Medicago truncatula clone mth2-30a2, complete sequence Length = 158384 Score = 44.1 bits (22), Expect = 0.31 Identities = 22/22 (100%) Strand = Plus / Plus Query: 69 gaaattgatatgaaaaattaaa 90 |||||||||||||||||||||| Sbjct: 58531 gaaattgatatgaaaaattaaa 58552
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 44.1 bits (22), Expect = 0.31 Identities = 22/22 (100%) Strand = Plus / Plus Query: 69 gaaattgatatgaaaaattaaa 90 |||||||||||||||||||||| Sbjct: 29518635 gaaattgatatgaaaaattaaa 29518656
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 44.1 bits (22), Expect = 0.31 Identities = 25/26 (96%) Strand = Plus / Plus Query: 202 cgctgccgccgagcacggacttgagc 227 |||||||||||||||||| ||||||| Sbjct: 7136995 cgctgccgccgagcacggccttgagc 7137020
>gb|AC144455.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0086G17, complete sequence Length = 134631 Score = 44.1 bits (22), Expect = 0.31 Identities = 22/22 (100%) Strand = Plus / Plus Query: 69 gaaattgatatgaaaaattaaa 90 |||||||||||||||||||||| Sbjct: 102905 gaaattgatatgaaaaattaaa 102926
>gb|AY146588.1| Triticum monococcum BAC clone 453N11, complete sequence Length = 285444 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 cacgtgtgggcgttatcattt 36 ||||||||||||||||||||| Sbjct: 104360 cacgtgtgggcgttatcattt 104380
>gb|AY146587.1| Triticum turgidum subsp. durum BAC 107G22, complete sequence Length = 142018 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 cacgtgtgggcgttatcattt 36 ||||||||||||||||||||| Sbjct: 73257 cacgtgtgggcgttatcattt 73277
>gb|AY299121.1| Xanthomonas oryzae bacteriophage Xp10 genomic DNA, complete genome Length = 44373 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 225 agcttcttcacctgcgcgtcg 245 ||||||||||||||||||||| Sbjct: 10658 agcttcttcacctgcgcgtcg 10638
>emb|AL939114.1|SCO939114 Streptomyces coelicolor A3(2) complete genome; segment 11/29 Length = 313800 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 224 gagcttcttcacctgcgcgtcgtcc 248 |||||||||||||| |||||||||| Sbjct: 305483 gagcttcttcaccttcgcgtcgtcc 305507
>gb|AC122011.3| Mus musculus chromosome 10 clone RP24-352E6, complete sequence Length = 181468 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 gaaattgatatgaaaaatta 88 |||||||||||||||||||| Sbjct: 13285 gaaattgatatgaaaaatta 13266
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 227 cttcttcacctgcgcgtcgt 246 |||||||||||||||||||| Sbjct: 2254715 cttcttcacctgcgcgtcgt 2254734
>gb|AC146316.3| Microcebus murinus clone CH257-437M14, complete sequence Length = 274705 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 ttgatatgaaaaattaaaca 92 |||||||||||||||||||| Sbjct: 59774 ttgatatgaaaaattaaaca 59793
>gb|AC119899.8| Mus musculus chromosome 5, clone RP24-235E5, complete sequence Length = 210751 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 61 catcaaatgaaattgatatgaaaa 84 |||||| ||||||||||||||||| Sbjct: 57747 catcaattgaaattgatatgaaaa 57770
>gb|AF030001.1|MMMHC29N7 Mus musculus major histocompatibility locus class III region:butyrophilin-like protein gene, partial cds; Notch4, PBX2, RAGE, lysophatidic acid acyl transferase-alpha, palmitoyl-protein thioesterase 2 (PPT2), CREB-RP, and tenascin X (TNX) genes, complete cds; and CYP21OHB pseudogene, complete sequence Length = 201964 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 313 tctggaggcctgggttgggg 332 |||||||||||||||||||| Sbjct: 197488 tctggaggcctgggttgggg 197507
>gb|AF049850.1|MMHC438N12 Mus musculus major histocompatibility locus class III region: complement C4 (C4) and cytochrome P450 hydroxylase A (CYP21OH-A) genes, complete cds; slp pseudogene, complete sequence; NG6, SKI, and complement factor B (Bf) genes, complete cds; and complement factor C2 (C2) gene, partial cds Length = 149886 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 313 tctggaggcctgggttgggg 332 |||||||||||||||||||| Sbjct: 77548 tctggaggcctgggttgggg 77567
>ref|XM_598627.2| PREDICTED: Bos taurus similar to CG6454-PB, isoform B (LOC520387), mRNA Length = 3625 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 80 gaaaaattaaacacaacttgaaac 103 |||||||||||||||| ||||||| Sbjct: 3157 gaaaaattaaacacaaattgaaac 3134
>gb|AC087514.2| Felis catus clone RP86-439N5, complete sequence Length = 151974 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 aatcatcaaatgaaattgat 77 |||||||||||||||||||| Sbjct: 60358 aatcatcaaatgaaattgat 60377
>ref|XR_002034.1| PREDICTED: Mus musculus similar to Cytochrome P450 XXI (Steroid 21-hydroxylase) (21-OHase) (P450-C21) (P-450c21) (LOC632302), mRNA Length = 1732 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 313 tctggaggcctgggttgggg 332 |||||||||||||||||||| Sbjct: 917 tctggaggcctgggttgggg 898
>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence Length = 2580084 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 200 gccgctgccgccgagcacgg 219 |||||||||||||||||||| Sbjct: 2457731 gccgctgccgccgagcacgg 2457712
>gb|AC141846.3| Homo sapiens chromosome 16 clone CTB-55P19, complete sequence Length = 261450 Score = 40.1 bits (20), Expect = 4.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 68 tgaaattgatatgaaaaattaaacacaa 95 ||||| |||| ||||||||||||||||| Sbjct: 232770 tgaaagtgatctgaaaaattaaacacaa 232743
>gb|AC115290.5| Mus musculus BAC clone RP23-65M10 from chromosome 10, complete sequence Length = 245623 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 79 tgaaaaattaaacacaacttgaaa 102 ||||||||||||||||| |||||| Sbjct: 225998 tgaaaaattaaacacaaattgaaa 226021
>gb|AC100120.9| Mus musculus chromosome 10, clone RP23-40I1, complete sequence Length = 236895 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 gaaattgatatgaaaaatta 88 |||||||||||||||||||| Sbjct: 38058 gaaattgatatgaaaaatta 38077
>gb|AC114553.6| Mus musculus chromosome 5, clone RP23-408M16, complete sequence Length = 198281 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 aatgaaattgatatgaaaaa 85 |||||||||||||||||||| Sbjct: 195204 aatgaaattgatatgaaaaa 195185
>emb|BX322613.6| Human DNA sequence from clone RP11-745D9 on chromosome 10 Contains a CpG island, complete sequence Length = 191752 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 aatcatcaaatgaaattgat 77 |||||||||||||||||||| Sbjct: 40708 aatcatcaaatgaaattgat 40727
>emb|AL590225.4| Human DNA sequence from clone RP11-358H7 on chromosome 6 Contains part of the gene for a novel protein highly similar to FLJ30899, complete sequence Length = 65114 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 aattgatatgaaaaattaaa 90 |||||||||||||||||||| Sbjct: 1289 aattgatatgaaaaattaaa 1270
>emb|AL161440.9| Human DNA sequence from clone RP1-210G8 on chromosome 6, complete sequence Length = 81780 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 tgaaaaattaaacacaactt 98 |||||||||||||||||||| Sbjct: 54905 tgaaaaattaaacacaactt 54886
>emb|AL031601.4|HSY237C10 Human DNA sequence from clone XX-Y237C10 on chromosome 10 Contains a poly(A) binding protein, cytoplasmic 1 (PABPC1) pseudogene, an Ig kappa chain precursor V region pseudogene, a pseudogene similar to part of kinase suppressor of ras (KSR) and four CpG islands, complete sequence Length = 197700 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 aatcatcaaatgaaattgat 77 |||||||||||||||||||| Sbjct: 760 aatcatcaaatgaaattgat 779
>gb|AC161185.5| Mus musculus chromosome 5, clone RP23-297D16, complete sequence Length = 206099 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 61 catcaaatgaaattgatatgaaaa 84 |||||| ||||||||||||||||| Sbjct: 2381 catcaattgaaattgatatgaaaa 2358
>emb|BX571857.1| Staphylococcus aureus strain MSSA476, complete genome Length = 2799802 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 aaattgatatgaaaaattaa 89 |||||||||||||||||||| Sbjct: 281659 aaattgatatgaaaaattaa 281678
>gb|AC158753.8| Mus musculus chromosome 5, clone RP23-301E24, complete sequence Length = 190368 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 aatgaaattgatatgaaaaa 85 |||||||||||||||||||| Sbjct: 32566 aatgaaattgatatgaaaaa 32547
>dbj|AB010266.1| Mus musculus Creb-rp, Tnx and Cyp21 genes for cAMP response element binding protein-related protein, tenascin-X and steroid 21-hydroxylase, partial cds and complete sequences Length = 67977 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 313 tctggaggcctgggttgggg 332 |||||||||||||||||||| Sbjct: 66569 tctggaggcctgggttgggg 66588
>dbj|AK146565.1| Mus musculus 17 days pregnant adult female amnion cDNA, RIKEN full-length enriched library, clone:I920026N02 product:cytochrome P450, family 21, subfamily a, polypeptide 1, full insert sequence Length = 2053 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 313 tctggaggcctgggttgggg 332 |||||||||||||||||||| Sbjct: 822 tctggaggcctgggttgggg 803
>gb|AC068304.33| Homo sapiens 12 BAC RP11-515A6 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 155413 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 tgaaaaattaaacacaactt 98 |||||||||||||||||||| Sbjct: 18496 tgaaaaattaaacacaactt 18477
>gb|AC092721.2| Homo sapiens chromosome 16 clone RP11-514P19, complete sequence Length = 201382 Score = 40.1 bits (20), Expect = 4.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 68 tgaaattgatatgaaaaattaaacacaa 95 ||||| |||| ||||||||||||||||| Sbjct: 194536 tgaaagtgatctgaaaaattaaacacaa 194509
>gb|AC140831.3| Homo sapiens chromosome 16 clone RP11-907K12, complete sequence Length = 96984 Score = 40.1 bits (20), Expect = 4.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 68 tgaaattgatatgaaaaattaaacacaa 95 ||||| |||| ||||||||||||||||| Sbjct: 28681 tgaaagtgatctgaaaaattaaacacaa 28708
>gb|AY613781.1| Mus musculus strain C57BL/10J truncated steroid 21-hydroxylase (Cyp21a1) gene, complete cds Length = 3261 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 313 tctggaggcctgggttgggg 332 |||||||||||||||||||| Sbjct: 1511 tctggaggcctgggttgggg 1492
>gb|AC139676.3| Homo sapiens chromosome 8, clone RP13-648O9, complete sequence Length = 166153 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 315 tggaggcctgggttggggcc 334 |||||||||||||||||||| Sbjct: 10496 tggaggcctgggttggggcc 10515
>gb|AC092374.4| Homo sapiens chromosome 16 clone RP11-637I8, complete sequence Length = 150962 Score = 40.1 bits (20), Expect = 4.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 68 tgaaattgatatgaaaaattaaacacaa 95 ||||| |||| ||||||||||||||||| Sbjct: 92388 tgaaagtgatctgaaaaattaaacacaa 92361
>gb|AC026131.4| Homo sapiens chromosome 11, clone RP11-458M15, complete sequence Length = 174688 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 aatcatcaaatgaaattgat 77 |||||||||||||||||||| Sbjct: 102969 aatcatcaaatgaaattgat 102950
>dbj|BA000033.2| Staphylococcus aureus subsp. aureus MW2 DNA, complete genome, strain:MW2 Length = 2820462 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 aaattgatatgaaaaattaa 89 |||||||||||||||||||| Sbjct: 282959 aaattgatatgaaaaattaa 282978
>gb|DQ341430.1| Lynx lynx steroid 21-hydroxylase gene, complete cds Length = 2955 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 313 tctggaggcctgggttgggg 332 |||||||||||||||||||| Sbjct: 1335 tctggaggcctgggttgggg 1316
>gb|AC007446.8|AC007446 Homo sapiens, clone hRPK.67_A_1, complete sequence Length = 177471 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 tgaaaaattaaacacaactt 98 |||||||||||||||||||| Sbjct: 126735 tgaaaaattaaacacaactt 126754
>gb|AC006289.1|AC006289 Mus musculus chromosome 17, clone 29_N_7, complete sequence Length = 201986 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 313 tctggaggcctgggttgggg 332 |||||||||||||||||||| Sbjct: 197509 tctggaggcctgggttgggg 197528
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 227 cttcttcacctgcgcgtcgt 246 |||||||||||||||||||| Sbjct: 2421518 cttcttcacctgcgcgtcgt 2421499
>emb|CT025759.14| Mouse DNA sequence from clone RP24-317H19 on chromosome 17, complete sequence Length = 171682 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 313 tctggaggcctgggttgggg 332 |||||||||||||||||||| Sbjct: 31075 tctggaggcctgggttgggg 31094
>emb|CT573030.2| Mouse DNA sequence from clone RP24-100B3 on chromosome 17, complete sequence Length = 111957 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 313 tctggaggcctgggttgggg 332 |||||||||||||||||||| Sbjct: 59098 tctggaggcctgggttgggg 59117
>ref|NM_009995.1| Mus musculus cytochrome P450, family 21, subfamily a, polypeptide 1 (Cyp21a1), mRNA Length = 1464 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 313 tctggaggcctgggttgggg 332 |||||||||||||||||||| Sbjct: 658 tctggaggcctgggttgggg 639
>gb|DP000022.1| Microcebus murinus target 1 genomic scaffold Length = 1595145 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 ttgatatgaaaaattaaaca 92 |||||||||||||||||||| Sbjct: 631265 ttgatatgaaaaattaaaca 631284
>gb|M64933.1|MUSSLPSEXB Mouse nonfunctional sex-limited protein, and cytochrome P-450 (Cyp21) genes, complete cds Length = 26307 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 313 tctggaggcctgggttgggg 332 |||||||||||||||||||| Sbjct: 24358 tctggaggcctgggttgggg 24339
>gb|M73820.1|MUSSLPSEXA Mouse sex-limited protein (SlpA) gene, exons 24-41, and cytochrome P-450 (Cyp21(w7A)) gene, exons 1-7 Length = 12544 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 313 tctggaggcctgggttgggg 332 |||||||||||||||||||| Sbjct: 12129 tctggaggcctgggttgggg 12110
>gb|M15008.1|MUS21OHA2 Mouse steroid 21-hydroxylase B (21-OHase B) gene, complete cds Length = 3163 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 313 tctggaggcctgggttgggg 332 |||||||||||||||||||| Sbjct: 1292 tctggaggcctgggttgggg 1273
>gb|M15009.1|MUS21OHA1 Mouse steroid 21-hydroxylase A (21-OHase A) gene, complete cds Length = 3307 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 313 tctggaggcctgggttgggg 332 |||||||||||||||||||| Sbjct: 1516 tctggaggcctgggttgggg 1497 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,080,033 Number of Sequences: 3902068 Number of extensions: 3080033 Number of successful extensions: 61771 Number of sequences better than 10.0: 73 Number of HSP's better than 10.0 without gapping: 73 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 61396 Number of HSP's gapped (non-prelim): 374 length of query: 364 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 342 effective length of database: 17,147,199,772 effective search space: 5864342322024 effective search space used: 5864342322024 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)