ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl53f11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ZNHI2_HUMAN (Q9UHR6) Zinc finger HIT domain-containing protein 2... 30 1.8
2ZNHI2_MOUSE (Q9QY66) Zinc finger HIT domain-containing protein 2... 29 2.4
3PXDC2_XENLA (Q6DE92) Plexin domain-containing protein 2 precursor 29 3.1
4YFC3_SCHPO (O14138) Hypothetical protein C25A8.03c in chromosome I 28 5.3
5ISK5_HUMAN (Q9NQ38) Serine protease inhibitor Kazal-type 5 precu... 28 6.9
6MUKB_MANSM (Q65TL9) Chromosome partition protein mukB (Structura... 28 6.9
7UHMK1_RAT (Q63285) Serine/threonine-protein kinase Kist (EC 2.7.... 28 6.9
8UHMK1_MOUSE (P97343) Serine/threonine-protein kinase Kist (EC 2.... 28 6.9
9UHMK1_HUMAN (Q8TAS1) Serine/threonine-protein kinase Kist (EC 2.... 28 6.9
10MLL3_MOUSE (Q8BRH4) Myeloid/lymphoid or mixed-lineage leukemia p... 27 9.0
11ATP6_AEDAL (Q5JCK5) ATP synthase a chain (EC 3.6.3.14) (ATPase p... 27 9.0
12MLL3_HUMAN (Q8NEZ4) Myeloid/lymphoid or mixed-lineage leukemia p... 27 9.0

>ZNHI2_HUMAN (Q9UHR6) Zinc finger HIT domain-containing protein 2 (Protein FON)|
          Length = 403

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
 Frame = -3

Query: 329 VPLFFEAMESLIK*-VTGNLRMDIPSKLFSYEHTAVLFHG 213
           VP    A+ SL +  V+  +R  +P+ LF+Y HT  L+HG
Sbjct: 192 VPTRIPAIVSLSRGPVSPLVRFQLPNVLFAYAHTLALYHG 231



to top

>ZNHI2_MOUSE (Q9QY66) Zinc finger HIT domain-containing protein 2 (Protein FON)|
          Length = 399

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = -3

Query: 275 LRMDIPSKLFSYEHTAVLFHG 213
           +R  +P+ LF+Y HT  L+HG
Sbjct: 206 VRFQLPNVLFAYAHTLALYHG 226



to top

>PXDC2_XENLA (Q6DE92) Plexin domain-containing protein 2 precursor|
          Length = 513

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 14/51 (27%), Positives = 22/51 (43%), Gaps = 19/51 (37%)
 Frame = -2

Query: 375 CSWCKV-------------------CSEDSKQGVCASIL*SYGVSYQVSDG 280
           CSWC +                   C+E+SK  VC  +L + G+S+  + G
Sbjct: 331 CSWCNIPQRCSSGFDRHRQDWVENGCTEESKDTVCDDLLQTTGISHHTTTG 381



to top

>YFC3_SCHPO (O14138) Hypothetical protein C25A8.03c in chromosome I|
          Length = 467

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 18/44 (40%), Positives = 22/44 (50%)
 Frame = -1

Query: 232 QLCCFMEVSVNCIVLLLCYFYFTVFKLLVSWFQNFLGILILDIL 101
           Q   F E   N +VL     YF VF L +  F +  GI+ LDIL
Sbjct: 126 QRSLFSESISNYLVLQYKLRYFPVFDLKIYDFHSGTGIIALDIL 169



to top

>ISK5_HUMAN (Q9NQ38) Serine protease inhibitor Kazal-type 5 precursor|
           (Lympho-epithelial Kazal-type-related inhibitor) (LEKTI)
           [Contains: Hemofiltrate peptide HF6478; Hemofiltrate
           peptide HF7665]
          Length = 1064

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
 Frame = +1

Query: 7   QIKKKQGVFSCTMT*QEKFRLVKGKIY-NLCGTKCPG*VSLENSETKKLTA*IR*SRSNT 183
           Q + K G+  CT    +  R   GK++ NLC + C      EN E KK  A  R  R + 
Sbjct: 301 QNQAKNGILFCTRE-NDPIRGPDGKMHGNLC-SMCQAYFQAENEEKKKAEARARNKRESG 358

Query: 184 ITTQY 198
             T Y
Sbjct: 359 KATSY 363



to top

>MUKB_MANSM (Q65TL9) Chromosome partition protein mukB (Structural maintenance|
           of chromosome-related protein)
          Length = 1499

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 13/26 (50%), Positives = 19/26 (73%), Gaps = 1/26 (3%)
 Frame = +2

Query: 314 QRIEAQ-TPCLESSLHTLHQEHQRQQ 388
           Q+++AQ TP L + LH L Q +Q+QQ
Sbjct: 537 QKLQAQQTPQLRAKLHELEQRYQQQQ 562



to top

>UHMK1_RAT (Q63285) Serine/threonine-protein kinase Kist (EC 2.7.11.1) (Kinase|
           interacting with stathmin) (U2AF homology motif kinase
           1) (PAM COOH-terminal interactor protein 2) (P-CIP2)
          Length = 419

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = +1

Query: 319 NRGTNSLFGVFTAHFAPGAPT 381
           +R   +L+GVFT HF+P  P+
Sbjct: 86  HRNIVTLYGVFTIHFSPNVPS 106



to top

>UHMK1_MOUSE (P97343) Serine/threonine-protein kinase Kist (EC 2.7.11.1) (Kinase|
           interacting with stathmin) (U2AF homology motif kinase
           1)
          Length = 419

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = +1

Query: 319 NRGTNSLFGVFTAHFAPGAPT 381
           +R   +L+GVFT HF+P  P+
Sbjct: 86  HRNIVTLYGVFTIHFSPNVPS 106



to top

>UHMK1_HUMAN (Q8TAS1) Serine/threonine-protein kinase Kist (EC 2.7.11.1) (Kinase|
           interacting with stathmin) (U2AF homology motif kinase
           1)
          Length = 419

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = +1

Query: 319 NRGTNSLFGVFTAHFAPGAPT 381
           +R   +L+GVFT HF+P  P+
Sbjct: 86  HRNIVTLYGVFTIHFSPNVPS 106



to top

>MLL3_MOUSE (Q8BRH4) Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog|
            (Histone-lysine N-methyltransferase, H3 lysine-4 specific
            MLL3) (EC 2.1.1.43)
          Length = 4903

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -2

Query: 384  CRWCSWCKVCSEDS 343
            C+WC WC+ C   S
Sbjct: 1044 CKWCVWCRHCGATS 1057



to top

>ATP6_AEDAL (Q5JCK5) ATP synthase a chain (EC 3.6.3.14) (ATPase protein 6)|
          Length = 226

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 8/19 (42%), Positives = 15/19 (78%)
 Frame = -1

Query: 166 TVFKLLVSWFQNFLGILIL 110
           T+F + ++WF  F+G+LI+
Sbjct: 14  TIFNMSLNWFSTFIGLLII 32



to top

>MLL3_HUMAN (Q8NEZ4) Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog|
            (Histone-lysine N-methyltransferase, H3 lysine-4 specific
            MLL3) (EC 2.1.1.43) (Homologous to ALR protein)
          Length = 4911

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -2

Query: 384  CRWCSWCKVCSEDS 343
            C+WC WC+ C   S
Sbjct: 1051 CKWCVWCRHCGATS 1064


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,699,746
Number of Sequences: 219361
Number of extensions: 926437
Number of successful extensions: 2355
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2291
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2354
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 1375720320
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top