ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl53f10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY532594.1| Triticum aestivum minichromosomal maintenance fac... 293 2e-76
2gb|AY532593.1| Triticum aestivum minichromosomal maintenance fac... 194 1e-46
3gb|AY109731.1| Zea mays CL9169_1 mRNA sequence 139 7e-30
4dbj|AK121422.1| Oryza sativa (japonica cultivar-group) cDNA clon... 115 1e-22
5gb|AC131343.4| Oryza sativa (japonica cultivar-group) chromosome... 62 1e-06
6dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 62 1e-06
7gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 62 1e-06
8gb|AC102105.8| Mus musculus chromosome 12, clone RP23-89G24, com... 42 1.2
9gb|AC069426.9| Homo sapiens 3 BAC RP11-200O17 (Roswell Park Canc... 42 1.2
10gb|AC137849.11| Mus musculus chromosome 1, clone RP24-124J24, co... 40 4.8
11gb|CY003699.1| Influenza A virus (A/New York/489/2003(H1N2)) seg... 40 4.8
12gb|CY003427.1| Influenza A virus (A/New York/407/2002(H3N2)) seg... 40 4.8
13gb|AC100531.15| Mus musculus chromosome 1, clone RP23-147I4, com... 40 4.8
14gb|CY001683.1| Influenza A virus (A/New York/78/2002(H1N2)) segm... 40 4.8
15emb|AL365203.19| Human DNA sequence from clone RP11-479G22 on ch... 40 4.8
16gb|CY010719.1| Influenza A virus (A/New York/631/1996(H3N2)) seg... 40 4.8
17gb|CY001739.1| Influenza A virus (A/New York/276/2002(H3N2)) seg... 40 4.8
18gb|AE016818.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10... 40 4.8
19gb|AC160394.2| Mus musculus BAC clone RP23-116C19 from chromosom... 40 4.8
20emb|BX934130.2| Gallus gallus finished cDNA, clone ChEST267k10 40 4.8
21dbj|AP000040.1| Homo sapiens genomic DNA, chromosome 21q22.1, se... 40 4.8
22gb|CY000548.1| Influenza A virus (A/New York/115/2002(H3N2)) seg... 40 4.8
23gb|CY000340.1| Influenza A virus (A/New York/135/2002(H3N2)) seg... 40 4.8
24emb|AL954212.1| Pan troglodytes chromosome 22 clone RP43-043L10 ... 40 4.8
25emb|BX571671.3| Zebrafish DNA sequence from clone DKEY-153O22 in... 40 4.8
26ref|NM_209992.1| Eremothecium gossypii AEL222Cp (AEL222C), mRNA 40 4.8
27emb|BX322618.8| Zebrafish DNA sequence from clone CH211-265G21 i... 40 4.8
28dbj|AP001715.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 4.8
29gb|CY003772.1| Influenza A virus (A/New York/417/2002(H1N2)) seg... 40 4.8
30gb|AC122220.4| Mus musculus BAC clone RP23-122B15 from 9, comple... 40 4.8
31gb|CY006398.1| Influenza A virus (A/New York/487/2003(H1N2)) seg... 40 4.8
32gb|CY006390.1| Influenza A virus (A/New York/481/2003(H1N2)) seg... 40 4.8
33dbj|AB056778.1| Macaca fascicularis brain cDNA clone:QccE-21094,... 40 4.8
34dbj|AP000281.1| Homo sapiens genomic DNA, chromosome 21q22.1, D2... 40 4.8
35dbj|AP000184.1| Homo sapiens genomic DNA, chromosome 21q22.1, D2... 40 4.8
36dbj|AP000108.1| Homo sapiens genomic DNA of 21q22.1, GART and AM... 40 4.8 
>gb|AY532594.1| Triticum aestivum minichromosomal maintenance factor (MCM2) mRNA,
            complete cds
          Length = 2923

 Score =  293 bits (148), Expect = 2e-76
 Identities = 184/196 (93%)
 Strand = Plus / Minus

                                                                        
Query: 156  gaggttgattgagttgttatgctgctactggatgcttgatgatcccacgcccttcatcca 215
            ||||| |||||||||||||||| || ||||||||| |||||||||||||||||||||| |
Sbjct: 2923 gaggtcgattgagttgttatgccgcaactggatgcctgatgatcccacgcccttcatcga 2864

                                                                        
Query: 216  ggacaaagctgttgtcgttgaagtgagagctggagaagaagggcctcagatcgtagatct 275
            ||||||||||||||||  |||||||||||||||||||||| |||||||| ||||||||||
Sbjct: 2863 ggacaaagctgttgtcactgaagtgagagctggagaagaacggcctcaggtcgtagatct 2804

                                                                        
Query: 276  catattcttgggccttgttcttcaggtcatccactttaacctcgacatgagtcaggcgtg 335
            ||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||
Sbjct: 2803 catattcttgggccttgttcttcaggtcatccactttaacctcaacgtgagtcaggcgtg 2744

                            
Query: 336  tggttgatcccgacac 351
            |||||||||| |||||
Sbjct: 2743 tggttgatccagacac 2728
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>gb|AY532593.1| Triticum aestivum minichromosomal maintenance factor (MCM2) gene,
            exons 1 through 18 and complete sequence
          Length = 8809

 Score =  194 bits (98), Expect = 1e-46
 Identities = 128/138 (92%)
 Strand = Plus / Minus

                                                                        
Query: 153  gctgaggttgattgagttgttatgctgctactggatgcttgatgatcccacgcccttcat 212
            ||||| |||||||||||||||||||||| ||||||||| ||||||||||||||||||| |
Sbjct: 8041 gctgatgttgattgagttgttatgctgcaactggatgcctgatgatcccacgcccttcgt 7982

                                                                        
Query: 213  ccaggacaaagctgttgtcgttgaagtgagagctggagaagaagggcctcagatcgtaga 272
            ||||||| |||||||||||| |||||||||||||||||||||| |||||||| |||||||
Sbjct: 7981 ccaggacgaagctgttgtcgctgaagtgagagctggagaagaacggcctcaggtcgtaga 7922

                              
Query: 273  tctcatattcttgggcct 290
            |||| || ||||||||||
Sbjct: 7921 tctcgtactcttgggcct 7904



 Score =  159 bits (80), Expect = 7e-36
 Identities = 110/120 (91%)
 Strand = Plus / Minus

                                                                        
Query: 5    aaatgccactggaggcacaagggtttcagatagcaaacagtacaccaacaccagaattcc 64
            ||||||| ||| |||||||||||||||||||||||||||||||||||| | ||||| || 
Sbjct: 8202 aaatgccgctgtaggcacaagggtttcagatagcaaacagtacaccaatatcagaactct 8143

                                                                        
Query: 65   cgtaaaacagacacgagcagtcattttgccaacttacactacaagtggacatttctagct 124
            |  ||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 8142 cacaaaacagacacaagcagtcattttgccgacttacactacaagtggacatttctagct 8083



 Score =  111 bits (56), Expect = 2e-21
 Identities = 62/64 (96%)
 Strand = Plus / Minus

                                                                        
Query: 288  ccttgttcttcaggtcatccactttaacctcgacatgagtcaggcgtgtggttgatcccg 347
            |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| 
Sbjct: 7796 ccttgttcttcaggtcatccactttaacctcgacatgagtcaggcgtgcggttgatccca 7737

                
Query: 348  acac 351
            ||||
Sbjct: 7736 acac 7733



 Score = 46.1 bits (23), Expect = 0.077
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 134  gctcttgaacaaagaggtagctg 156
            |||||||||||||||||||||||
Sbjct: 8085 gctcttgaacaaagaggtagctg 8063
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>gb|AY109731.1| Zea mays CL9169_1 mRNA sequence
          Length = 623

 Score =  139 bits (70), Expect = 7e-30
 Identities = 139/162 (85%)
 Strand = Plus / Plus

                                                                       
Query: 184 tggatgcttgatgatcccacgcccttcatccaggacaaagctgttgtcgttgaagtgaga 243
           ||||||| ||||||||||||||||||||||||| |  |||| ||||||  |||||   | 
Sbjct: 178 tggatgcctgatgatcccacgcccttcatccagaaggaagccgttgtccctgaagcacgc 237

                                                                       
Query: 244 gctggagaagaagggcctcagatcgtagatctcatattcttgggccttgttcttcaggtc 303
           |||||||||||| ||| |||||||||||||||| |||||||||||||||||| |||||||
Sbjct: 238 gctggagaagaacggcttcagatcgtagatctcgtattcttgggccttgttcctcaggtc 297

                                                     
Query: 304 atccactttaacctcgacatgagtcaggcgtgtggttgatcc 345
            |||| ||| |||||||| ||||| || |||| || ||||||
Sbjct: 298 ctccaatttgacctcgacgtgagtaagacgtgaggctgatcc 339
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>dbj|AK121422.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023133N01, full
            insert sequence
          Length = 3214

 Score =  115 bits (58), Expect = 1e-22
 Identities = 121/142 (85%)
 Strand = Plus / Minus

                                                                        
Query: 192  tgatgatcccacgcccttcatccaggacaaagctgttgtcgttgaagtgagagctggaga 251
            |||||||||| |||||||| || ||||| ||| |||||||  ||||||| | ||||||||
Sbjct: 2949 tgatgatcccccgcccttcgtcgaggacgaagttgttgtccctgaagtgggcgctggaga 2890

                                                                        
Query: 252  agaagggcctcagatcgtagatctcatattcttgggccttgttcttcaggtcatccactt 311
            |||| || ||||| || ||||| || || || |||||||||||||||||||| || ||||
Sbjct: 2889 agaacggtctcaggtcatagatttcgtactcctgggccttgttcttcaggtcctctactt 2830

                                  
Query: 312  taacctcgacatgagtcaggcg 333
            |||||||||  |||||||||||
Sbjct: 2829 taacctcgatgtgagtcaggcg 2808
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>gb|AC131343.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0057E15,
              complete sequence
          Length = 149035

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 82/99 (82%)
 Strand = Plus / Minus

                                                                          
Query: 192    tgatgatcccacgcccttcatccaggacaaagctgttgtcgttgaagtgagagctggaga 251
              |||||||||| |||||||| || ||||| ||| |||||||  ||||||| | ||||||||
Sbjct: 102793 tgatgatcccccgcccttcgtcgaggacgaagttgttgtccctgaagtgggcgctggaga 102734

                                                     
Query: 252    agaagggcctcagatcgtagatctcatattcttgggcct 290
              |||| || ||||| || ||||| || || || |||||||
Sbjct: 102733 agaacggtctcaggtcatagatttcgtactcctgggcct 102695



 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                            
Query: 288    ccttgttcttcaggtcatccactttaacctcgacatgagtcaggcg 333
              |||||||||||||||| || |||||||||||||  |||||||||||
Sbjct: 102584 ccttgttcttcaggtcctctactttaacctcgatgtgagtcaggcg 102539
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 82/99 (82%)
 Strand = Plus / Minus

                                                                            
Query: 192      tgatgatcccacgcccttcatccaggacaaagctgttgtcgttgaagtgagagctggaga 251
                |||||||||| |||||||| || ||||| ||| |||||||  ||||||| | ||||||||
Sbjct: 16462194 tgatgatcccccgcccttcgtcgaggacgaagttgttgtccctgaagtgggcgctggaga 16462135

                                                       
Query: 252      agaagggcctcagatcgtagatctcatattcttgggcct 290
                |||| || ||||| || ||||| || || || |||||||
Sbjct: 16462134 agaacggtctcaggtcatagatttcgtactcctgggcct 16462096



 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                              
Query: 288      ccttgttcttcaggtcatccactttaacctcgacatgagtcaggcg 333
                |||||||||||||||| || |||||||||||||  |||||||||||
Sbjct: 16461985 ccttgttcttcaggtcctctactttaacctcgatgtgagtcaggcg 16461940
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 82/99 (82%)
 Strand = Plus / Minus

                                                                            
Query: 192      tgatgatcccacgcccttcatccaggacaaagctgttgtcgttgaagtgagagctggaga 251
                |||||||||| |||||||| || ||||| ||| |||||||  ||||||| | ||||||||
Sbjct: 16553198 tgatgatcccccgcccttcgtcgaggacgaagttgttgtccctgaagtgggcgctggaga 16553139

                                                       
Query: 252      agaagggcctcagatcgtagatctcatattcttgggcct 290
                |||| || ||||| || ||||| || || || |||||||
Sbjct: 16553138 agaacggtctcaggtcatagatttcgtactcctgggcct 16553100



 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                              
Query: 288      ccttgttcttcaggtcatccactttaacctcgacatgagtcaggcg 333
                |||||||||||||||| || |||||||||||||  |||||||||||
Sbjct: 16552989 ccttgttcttcaggtcctctactttaacctcgatgtgagtcaggcg 16552944
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>gb|AC102105.8| Mus musculus chromosome 12, clone RP23-89G24, complete sequence
          Length = 188853

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 144    aaagaggtagctgaggttgat 164
              |||||||||||||||||||||
Sbjct: 103298 aaagaggtagctgaggttgat 103318
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>gb|AC069426.9| Homo sapiens 3 BAC RP11-200O17 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 128500

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 290   ttgttcttcaggtcatccactttaacctc 318
             ||||||||||||||| |||||| ||||||
Sbjct: 50709 ttgttcttcaggtcacccacttgaacctc 50737
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>gb|AC137849.11| Mus musculus chromosome 1, clone RP24-124J24, complete sequence
          Length = 178764

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 207   cttcatccaggacaaagctg 226
             ||||||||||||||||||||
Sbjct: 21112 cttcatccaggacaaagctg 21093
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>gb|CY003699.1| Influenza A virus (A/New York/489/2003(H1N2)) segment 5, complete
           sequence
          Length = 1530

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 263 agatcgtagatctcatattcttgg 286
           |||||| |||||||||||||||||
Sbjct: 777 agatcgaagatctcatattcttgg 800
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>gb|CY003427.1| Influenza A virus (A/New York/407/2002(H3N2)) segment 5, complete
           sequence
          Length = 1566

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 263 agatcgtagatctcatattcttgg 286
           |||||| |||||||||||||||||
Sbjct: 800 agatcgaagatctcatattcttgg 823
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>gb|AC100531.15| Mus musculus chromosome 1, clone RP23-147I4, complete sequence
          Length = 202351

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 207   cttcatccaggacaaagctg 226
             ||||||||||||||||||||
Sbjct: 33699 cttcatccaggacaaagctg 33718
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>gb|CY001683.1| Influenza A virus (A/New York/78/2002(H1N2)) segment 5, complete
           sequence
          Length = 1566

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 263 agatcgtagatctcatattcttgg 286
           |||||| |||||||||||||||||
Sbjct: 800 agatcgaagatctcatattcttgg 823
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>emb|AL365203.19| Human DNA sequence from clone RP11-479G22 on chromosome 10 Contains the
             3' end of a novel gene (FLJ13031) (FLJ40349), the ITGB1
             gene for integrin beta 1 (fibronectin receptor beta
             polypeptide antigen CD29 includes MDF2 MSK12), an
             adenylate kinase 3 like 1 (AK3L1) pseudogene, a novel
             gene, the 5' end of a novel gene, a NADH dehydrogenase
             subunit 4L (ND4L) pseudogene, a pseudogene similar to part
             of integrin beta 2 (antigen CD18 (p95) lymphocyte
             function-associated antigen 1; macrophage antigen 1
             (mac-1) beta subunit) (ITGB2) and a CpG island, complete
             sequence
          Length = 197973

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 15    ggaggcacaagggtttcaga 34
             ||||||||||||||||||||
Sbjct: 92711 ggaggcacaagggtttcaga 92692
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>gb|CY010719.1| Influenza A virus (A/New York/631/1996(H3N2)) segment 5, complete
           sequence
          Length = 1522

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 263 agatcgtagatctcatattcttgg 286
           |||||| |||||||||||||||||
Sbjct: 777 agatcgaagatctcatattcttgg 800
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>gb|CY001739.1| Influenza A virus (A/New York/276/2002(H3N2)) segment 5, complete
           sequence
          Length = 1566

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 263 agatcgtagatctcatattcttgg 286
           |||||| |||||||||||||||||
Sbjct: 800 agatcgaagatctcatattcttgg 823
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>gb|AE016818.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome V,
              complete sequence
          Length = 1519138

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 242    gagctggagaagaagggcct 261
              ||||||||||||||||||||
Sbjct: 214396 gagctggagaagaagggcct 214377
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>gb|AC160394.2| Mus musculus BAC clone RP23-116C19 from chromosome 9, complete sequence
          Length = 201200

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 336   tggttgatcccgacacaatctctt 359
             ||||||||||||| ||||||||||
Sbjct: 24190 tggttgatcccgaaacaatctctt 24167
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>emb|BX934130.2| Gallus gallus finished cDNA, clone ChEST267k10
          Length = 1947

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 292  gttcttcaggtcatccactt 311
            ||||||||||||||||||||
Sbjct: 1258 gttcttcaggtcatccactt 1277
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>dbj|AP000040.1| Homo sapiens genomic DNA, chromosome 21q22.1, segment 11/28, complete
             sequence
          Length = 100000

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 175   tgctgctactggatgcttga 194
             ||||||||||||||||||||
Sbjct: 14249 tgctgctactggatgcttga 14268
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>gb|CY000548.1| Influenza A virus (A/New York/115/2002(H3N2)) segment 5, complete
           sequence
          Length = 1566

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 263 agatcgtagatctcatattcttgg 286
           |||||| |||||||||||||||||
Sbjct: 800 agatcgaagatctcatattcttgg 823
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>gb|CY000340.1| Influenza A virus (A/New York/135/2002(H3N2)) segment 5, complete
           sequence
          Length = 1566

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 263 agatcgtagatctcatattcttgg 286
           |||||| |||||||||||||||||
Sbjct: 800 agatcgaagatctcatattcttgg 823
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>emb|AL954212.1| Pan troglodytes chromosome 22 clone RP43-043L10 map 22q22.11, complete
             sequence
          Length = 192328

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 175   tgctgctactggatgcttga 194
             ||||||||||||||||||||
Sbjct: 50412 tgctgctactggatgcttga 50431
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>emb|BX571671.3| Zebrafish DNA sequence from clone DKEY-153O22 in linkage group 20,
             complete sequence
          Length = 86323

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 295   cttcaggtcatccactttaa 314
             ||||||||||||||||||||
Sbjct: 16672 cttcaggtcatccactttaa 16691
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>ref|NM_209992.1| Eremothecium gossypii AEL222Cp (AEL222C), mRNA
          Length = 705

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 242 gagctggagaagaagggcct 261
           ||||||||||||||||||||
Sbjct: 46  gagctggagaagaagggcct 65
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>emb|BX322618.8| Zebrafish DNA sequence from clone CH211-265G21 in linkage group 20,
             complete sequence
          Length = 144211

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 295   cttcaggtcatccactttaa 314
             ||||||||||||||||||||
Sbjct: 71855 cttcaggtcatccactttaa 71836
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>dbj|AP001715.1| Homo sapiens genomic DNA, chromosome 21q, section 59/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 175    tgctgctactggatgcttga 194
              ||||||||||||||||||||
Sbjct: 179399 tgctgctactggatgcttga 179418
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>gb|CY003772.1| Influenza A virus (A/New York/417/2002(H1N2)) segment 5, complete
           sequence
          Length = 1541

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 263 agatcgtagatctcatattcttgg 286
           |||||| |||||||||||||||||
Sbjct: 788 agatcgaagatctcatattcttgg 811
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>gb|AC122220.4| Mus musculus BAC clone RP23-122B15 from 9, complete sequence
          Length = 188580

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 336   tggttgatcccgacacaatctctt 359
             ||||||||||||| ||||||||||
Sbjct: 22573 tggttgatcccgaaacaatctctt 22596
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>gb|CY006398.1| Influenza A virus (A/New York/487/2003(H1N2)) segment 5, complete
           sequence
          Length = 1508

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 263 agatcgtagatctcatattcttgg 286
           |||||| |||||||||||||||||
Sbjct: 755 agatcgaagatctcatattcttgg 778
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>gb|CY006390.1| Influenza A virus (A/New York/481/2003(H1N2)) segment 5, complete
           sequence
          Length = 1554

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 263 agatcgtagatctcatattcttgg 286
           |||||| |||||||||||||||||
Sbjct: 788 agatcgaagatctcatattcttgg 811
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>dbj|AB056778.1| Macaca fascicularis brain cDNA clone:QccE-21094, full insert
           sequence
          Length = 1550

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 140 gaacaaagaggtagctgagg 159
           ||||||||||||||||||||
Sbjct: 727 gaacaaagaggtagctgagg 746
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>dbj|AP000281.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region,
             clone:T1588, complete sequence
          Length = 66129

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 175   tgctgctactggatgcttga 194
             ||||||||||||||||||||
Sbjct: 58308 tgctgctactggatgcttga 58327
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>dbj|AP000184.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone
             Q78C10-f32E9, segment 11/21, complete sequence
          Length = 100000

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 175   tgctgctactggatgcttga 194
             ||||||||||||||||||||
Sbjct: 20225 tgctgctactggatgcttga 20244
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>dbj|AP000108.1| Homo sapiens genomic DNA of 21q22.1, GART and AML related,
             Q78C10-149C3 region, segment 11/20
          Length = 100000

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 175   tgctgctactggatgcttga 194
             ||||||||||||||||||||
Sbjct: 20225 tgctgctactggatgcttga 20244


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,759,752
Number of Sequences: 3902068
Number of extensions: 2759752
Number of successful extensions: 61747
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 61650
Number of HSP's gapped (non-prelim): 96
length of query: 359
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 337
effective length of database: 17,147,199,772
effective search space: 5778606323164
effective search space used: 5778606323164
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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