ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl53f08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT009262.1| Triticum aestivum clone wlk4.pk0022.b7:fis, full ... 206 4e-50
2dbj|AK061865.1| Oryza sativa (japonica cultivar-group) cDNA clon... 105 1e-19
3dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 105 1e-19
4dbj|AP003282.2| Oryza sativa (japonica cultivar-group) genomic D... 105 1e-19
5dbj|AK065102.1| Oryza sativa (japonica cultivar-group) cDNA clon... 105 1e-19
6dbj|AB001920.1| Oryza sativa (japonica cultivar-group) gene for ... 105 1e-19
7dbj|D73411.1|RICPHD2 Oryza sativa (japonica cultivar-group) mRNA... 105 1e-19
8dbj|AK119523.1| Oryza sativa (japonica cultivar-group) cDNA clon... 98 3e-17
9gb|AY109642.1| Zea mays CL1830_1 mRNA sequence 94 4e-16
10dbj|D73410.1|MZEPHD1 Zea mays mRNA for phospholipase D, complete... 94 4e-16
11gb|AY105267.1| Zea mays PCO139922 mRNA sequence 92 2e-15
12gb|DQ267933.1| Cucumis melo var. inodorus phospholipase D-alpha ... 48 0.022
13gb|AC087553.3| Oryza sativa (japonica cultivar-group) chromosome... 46 0.085
14dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.085
15gb|AC009229.5| Homo sapiens BAC clone RP11-314C9 from 2, complet... 46 0.085
16ref|NM_112443.1| Arabidopsis thaliana PLDALPHA1 (PHOSPHOLIPASE D... 44 0.34
17gb|BT014735.1| Arabidopsis thaliana At3g15730.1 mRNA sequence 44 0.34
18gb|AC006663.1| Caenorhabditis elegans fosmid H24K24, complete se... 44 0.34
19emb|CR391935.9| Zebrafish DNA sequence from clone DKEY-256K13 in... 44 0.34
20emb|BX469903.9| Zebrafish DNA sequence from clone CH211-46H12 in... 44 0.34
21gb|AF428278.1|AF428278 Arabidopsis thaliana AT3g15730/MSJ11_13 m... 44 0.34
22ref|NM_070954.2| Caenorhabditis elegans H24K24.2 (H24K24.2) mRNA... 44 0.34
23gb|BT003026.1| Arabidopsis thaliana At3g15730/MSJ11_13 gene, com... 44 0.34
24dbj|AB017071.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 44 0.34
25emb|X56656.1|LEPHOA L.enzymogenes phoA gene for secreted alkalin... 42 1.3
26emb|BX548247.6| Zebrafish DNA sequence from clone DKEY-177G18 in... 42 1.3
27dbj|BS000229.1| Pan troglodytes chromosome 22 clone:RP43-015P20,... 42 1.3
28dbj|AP001747.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 42 1.3
29dbj|AP001626.1| Homo sapiens genomic DNA, chromosome 21, clone:K... 42 1.3
30dbj|AB017602.1| Homo sapiens PDE9A gene for cGMP phosphodiestera... 42 1.3
31gb|BC032099.2| Homo sapiens pygopus homolog 2 (Drosophila), mRNA... 40 5.3
32gb|BC013725.1| Homo sapiens pygopus homolog 2 (Drosophila), mRNA... 40 5.3
33ref|XM_525221.1| PREDICTED: Pan troglodytes similar to Pygopus h... 40 5.3
34ref|XM_593770.2| PREDICTED: Bos taurus similar to Pygopus homolo... 40 5.3
35ref|NM_138300.3| Homo sapiens pygopus homolog 2 (Drosophila) (PY... 40 5.3
36gb|AC132454.3| Mus musculus BAC clone RP23-127P22 from chromosom... 40 5.3
37gb|AC127316.3| Mus musculus BAC clone RP23-222G16 from 13, compl... 40 5.3
38emb|AL451085.20| Human DNA sequence from clone RP11-307C12 on ch... 40 5.3
39emb|CR860452.1| Pongo pygmaeus mRNA; cDNA DKFZp459G041 (from clo... 40 5.3
40emb|CR624320.1| full-length cDNA clone CS0DL007YH03 of B cells (... 40 5.3
41dbj|AK095899.1| Homo sapiens cDNA FLJ38580 fis, clone HCHON20085... 40 5.3
42dbj|AK092389.1| Homo sapiens cDNA FLJ35070 fis, clone PLACE5000139 40 5.3
43dbj|AK090545.1| Homo sapiens cDNA FLJ33226 fis, clone ASTRO2001029 40 5.3
44dbj|AP007157.1| Aspergillus oryzae RIB40 genomic DNA, SC023 40 5.3
45gb|AC008914.7| Homo sapiens chromosome 5 clone CTD-2270I16, comp... 40 5.3
46gb|AF457208.1| Homo sapiens pygopus 2 (PYGO2) mRNA, complete cds 40 5.3
47gb|AF289598.1|AF289598 Homo sapiens clone pp7910 unknown mRNA 40 5.3
48gb|AC016632.7| Homo sapiens chromosome 5 clone RP11-175M2, compl... 40 5.3
49gb|BC006132.1| Homo sapiens pygopus homolog 2 (Drosophila), mRNA... 40 5.3
50emb|BX908754.8| Zebrafish DNA sequence from clone DKEY-196D8 in ... 40 5.3
51gb|AY111616.1| Zea mays CL18897_1 mRNA sequence 40 5.3
52gb|AY294150.1| Platyamoeba placida small subunit ribosomal RNA g... 40 5.3 
>gb|BT009262.1| Triticum aestivum clone wlk4.pk0022.b7:fis, full insert mRNA sequence
          Length = 2997

 Score =  206 bits (104), Expect = 4e-50
 Identities = 113/116 (97%)
 Strand = Plus / Minus

                                                                        
Query: 272  atctatgtggtgaggatggggggaaggtagtccgacttggtgccgaggatgcgggcccgg 331
            |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 2571 atctatgtggtgaggatggggggaaggtagtccgacttggcgccgaggatgcgggcccgg 2512

                                                                    
Query: 332  gtgtcggggaagaactccatgccaggcagctccgtcaccacgccgtcgttggcgac 387
            ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||
Sbjct: 2511 gtgtcggggaagaactccatgcccggcagctccgtcaccacgccgtcgctggcgac 2456



 Score =  168 bits (85), Expect = 9e-39
 Identities = 100/105 (95%)
 Strand = Plus / Minus

                                                                        
Query: 124  tagtcactaccgcgtttctcaaccatgcacaccactgcgcttattaactgtcccacaact 183
            |||||||||||| | ||||||||||||||||||||||||||||||||| ||||| |||||
Sbjct: 2712 tagtcactaccgtggttctcaaccatgcacaccactgcgcttattaacagtcccgcaact 2653

                                                         
Query: 184  ataacaacctgctattttctgaaacacaagttctgaatcaccaaa 228
            |||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 2652 ataacagcctgctattttctgaaacacaagttctgaatcaccaaa 2608



 Score =  115 bits (58), Expect = 1e-22
 Identities = 67/70 (95%)
 Strand = Plus / Minus

                                                                        
Query: 9    cgtaagcaactaaacattgacaatttataattaaacagtaatacaaacatcagaaaccgt 68
            ||||| ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||
Sbjct: 2793 cgtaaacaactaaacattgacaatttataattaaacagtgatacaaacagcagaaaccgt 2734

                      
Query: 69   gtaaagtatc 78
            ||||||||||
Sbjct: 2733 gtaaagtatc 2724
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>dbj|AK061865.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-H06, full
           insert sequence
          Length = 1084

 Score =  105 bits (53), Expect = 1e-19
 Identities = 104/121 (85%)
 Strand = Plus / Minus

                                                                       
Query: 273 tctatgtggtgaggatggggggaaggtagtccgacttggtgccgaggatgcgggcccggg 332
           |||||| ||||||||||||||| | ||| |||||||||| |||||||| ||||||||| |
Sbjct: 769 tctatgaggtgaggatggggggcatgtaatccgacttggcgccgaggacgcgggcccgtg 710

                                                                       
Query: 333 tgtcggggaagaactccatgccaggcagctccgtcaccacgccgtcgttggcgacaccaa 392
           |||| || ||| ||||||| || |||||||| |||||||| || ||| ||||||| ||||
Sbjct: 709 tgtcaggaaagtactccatcccgggcagctcagtcaccacaccatcgctggcgacgccaa 650

            
Query: 393 t 393
           |
Sbjct: 649 t 649
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score =  105 bits (53), Expect = 1e-19
 Identities = 104/121 (85%)
 Strand = Plus / Plus

                                                                           
Query: 273     tctatgtggtgaggatggggggaaggtagtccgacttggtgccgaggatgcgggcccggg 332
               |||||| ||||||||||||||| | ||| |||||||||| |||||||| ||||||||| |
Sbjct: 3723982 tctatgaggtgaggatggggggcatgtaatccgacttggcgccgaggacgcgggcccgtg 3724041

                                                                           
Query: 333     tgtcggggaagaactccatgccaggcagctccgtcaccacgccgtcgttggcgacaccaa 392
               |||| || ||| ||||||| || |||||||| |||||||| || ||| ||||||| ||||
Sbjct: 3724042 tgtcaggaaagtactccatcccgggcagctcagtcaccacaccatcgctggcgacgccaa 3724101

                
Query: 393     t 393
               |
Sbjct: 3724102 t 3724102
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>dbj|AP003282.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0583G08
          Length = 135295

 Score =  105 bits (53), Expect = 1e-19
 Identities = 104/121 (85%)
 Strand = Plus / Plus

                                                                          
Query: 273    tctatgtggtgaggatggggggaaggtagtccgacttggtgccgaggatgcgggcccggg 332
              |||||| ||||||||||||||| | ||| |||||||||| |||||||| ||||||||| |
Sbjct: 132462 tctatgaggtgaggatggggggcatgtaatccgacttggcgccgaggacgcgggcccgtg 132521

                                                                          
Query: 333    tgtcggggaagaactccatgccaggcagctccgtcaccacgccgtcgttggcgacaccaa 392
              |||| || ||| ||||||| || |||||||| |||||||| || ||| ||||||| ||||
Sbjct: 132522 tgtcaggaaagtactccatcccgggcagctcagtcaccacaccatcgctggcgacgccaa 132581

               
Query: 393    t 393
              |
Sbjct: 132582 t 132582
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>dbj|AK065102.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001N03, full
            insert sequence
          Length = 2851

 Score =  105 bits (53), Expect = 1e-19
 Identities = 104/121 (85%)
 Strand = Plus / Minus

                                                                        
Query: 273  tctatgtggtgaggatggggggaaggtagtccgacttggtgccgaggatgcgggcccggg 332
            |||||| ||||||||||||||| | ||| |||||||||| |||||||| ||||||||| |
Sbjct: 2553 tctatgaggtgaggatggggggcatgtaatccgacttggcgccgaggacgcgggcccgtg 2494

                                                                        
Query: 333  tgtcggggaagaactccatgccaggcagctccgtcaccacgccgtcgttggcgacaccaa 392
            |||| || ||| ||||||| || |||||||| |||||||| || ||| ||||||| ||||
Sbjct: 2493 tgtcaggaaagtactccatcccgggcagctcagtcaccacaccatcgctggcgacgccaa 2434

             
Query: 393  t 393
            |
Sbjct: 2433 t 2433
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>dbj|AB001920.1| Oryza sativa (japonica cultivar-group) gene for phospholipase D,
            complete cds
          Length = 5871

 Score =  105 bits (53), Expect = 1e-19
 Identities = 104/121 (85%)
 Strand = Plus / Minus

                                                                        
Query: 273  tctatgtggtgaggatggggggaaggtagtccgacttggtgccgaggatgcgggcccggg 332
            |||||| ||||||||||||||| | ||| |||||||||| |||||||| ||||||||| |
Sbjct: 5333 tctatgaggtgaggatggggggcatgtaatccgacttggcgccgaggacgcgggcccgtg 5274

                                                                        
Query: 333  tgtcggggaagaactccatgccaggcagctccgtcaccacgccgtcgttggcgacaccaa 392
            |||| || ||| ||||||| || |||||||| |||||||| || ||| ||||||| ||||
Sbjct: 5273 tgtcaggaaagtactccatcccgggcagctcagtcaccacaccatcgctggcgacgccaa 5214

             
Query: 393  t 393
            |
Sbjct: 5213 t 5213
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>dbj|D73411.1|RICPHD2 Oryza sativa (japonica cultivar-group) mRNA for phospholipase D,
            complete cds
          Length = 2990

 Score =  105 bits (53), Expect = 1e-19
 Identities = 104/121 (85%)
 Strand = Plus / Minus

                                                                        
Query: 273  tctatgtggtgaggatggggggaaggtagtccgacttggtgccgaggatgcgggcccggg 332
            |||||| ||||||||||||||| | ||| |||||||||| |||||||| ||||||||| |
Sbjct: 2621 tctatgaggtgaggatggggggcatgtaatccgacttggcgccgaggacgcgggcccgtg 2562

                                                                        
Query: 333  tgtcggggaagaactccatgccaggcagctccgtcaccacgccgtcgttggcgacaccaa 392
            |||| || ||| ||||||| || |||||||| |||||||| || ||| ||||||| ||||
Sbjct: 2561 tgtcaggaaagtactccatcccgggcagctcagtcaccacaccatcgctggcgacgccaa 2502

             
Query: 393  t 393
            |
Sbjct: 2501 t 2501
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>dbj|AK119523.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-E03, full
            insert sequence
          Length = 2831

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 97/113 (85%)
 Strand = Plus / Minus

                                                                        
Query: 273  tctatgtggtgaggatggggggaaggtagtccgacttggtgccgaggatgcgggcccggg 332
            |||||| ||||||||||||||| | ||| |||||||||| |||||||| ||||||||| |
Sbjct: 2559 tctatgaggtgaggatggggggcatgtaatccgacttggcgccgaggacgcgggcccgtg 2500

                                                                 
Query: 333  tgtcggggaagaactccatgccaggcagctccgtcaccacgccgtcgttggcg 385
            |||| || ||| ||||||| || |||||||| |||||||| || ||| |||||
Sbjct: 2499 tgtcaggaaagtactccatcccgggcagctcagtcaccacaccatcgctggcg 2447
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>gb|AY109642.1| Zea mays CL1830_1 mRNA sequence
          Length = 2876

 Score = 93.7 bits (47), Expect = 4e-16
 Identities = 80/91 (87%)
 Strand = Plus / Minus

                                                                        
Query: 273  tctatgtggtgaggatggggggaaggtagtccgacttggtgccgaggatgcgggcccggg 332
            ||||||||||||||||||| || ||||| ||||||||| | ||||||| |||||| ||||
Sbjct: 2546 tctatgtggtgaggatgggcgggaggtaatccgacttgttcccgaggacgcgggcgcggg 2487

                                           
Query: 333  tgtcggggaagaactccatgccaggcagctc 363
            |||||||||||  |||||| || ||||||||
Sbjct: 2486 tgtcggggaagttctccatcccgggcagctc 2456
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>dbj|D73410.1|MZEPHD1 Zea mays mRNA for phospholipase D, complete cds
          Length = 2793

 Score = 93.7 bits (47), Expect = 4e-16
 Identities = 80/91 (87%)
 Strand = Plus / Minus

                                                                        
Query: 273  tctatgtggtgaggatggggggaaggtagtccgacttggtgccgaggatgcgggcccggg 332
            ||||||||||||||||||| || ||||| ||||||||| | ||||||| |||||| ||||
Sbjct: 2546 tctatgtggtgaggatgggcgggaggtaatccgacttgttcccgaggacgcgggcgcggg 2487

                                           
Query: 333  tgtcggggaagaactccatgccaggcagctc 363
            |||||||||||  |||||| || ||||||||
Sbjct: 2486 tgtcggggaagttctccatcccgggcagctc 2456
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>gb|AY105267.1| Zea mays PCO139922 mRNA sequence
          Length = 541

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 79/90 (87%)
 Strand = Plus / Plus

                                                                       
Query: 274 ctatgtggtgaggatggggggaaggtagtccgacttggtgccgaggatgcgggcccgggt 333
           |||||||||||||||||| || ||||| ||||||||| ||||||||| |||||| |||||
Sbjct: 353 ctatgtggtgaggatgggcgggaggtaatccgacttgttgccgaggacgcgggcacgggt 412

                                         
Query: 334 gtcggggaagaactccatgccaggcagctc 363
           ||| ||||||  |||||| || ||||||||
Sbjct: 413 gtcagggaagttctccatcccgggcagctc 442
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>gb|DQ267933.1| Cucumis melo var. inodorus phospholipase D-alpha (PLDa1) mRNA,
            complete cds
          Length = 2877

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 57/68 (83%)
 Strand = Plus / Minus

                                                                        
Query: 281  gtgaggatggggggaaggtagtccgacttggtgccgaggatgcgggcccgggtgtcgggg 340
            ||||||||||| || |||||||| || ||||| ||||| || || ||   ||||||||||
Sbjct: 2527 gtgaggatgggagggaggtagtcggatttggtaccgagtatacgagctttggtgtcgggg 2468

                    
Query: 341  aagaactc 348
            ||||||||
Sbjct: 2467 aagaactc 2460
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>gb|AC087553.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0685E10,
             complete sequence
          Length = 156772

 Score = 46.1 bits (23), Expect = 0.085
 Identities = 47/55 (85%)
 Strand = Plus / Plus

                                                                    
Query: 296   aggtagtccgacttggtgccgaggatgcgggcccgggtgtcggggaagaactcca 350
             |||||||| || |||| ||| ||||| || ||| ||||||| |||||||||||||
Sbjct: 83490 aggtagtcggatttggcgccaaggatccgcgcctgggtgtccgggaagaactcca 83544
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 46.1 bits (23), Expect = 0.085
 Identities = 47/55 (85%)
 Strand = Plus / Plus

                                                                      
Query: 296     aggtagtccgacttggtgccgaggatgcgggcccgggtgtcggggaagaactcca 350
               |||||||| || |||| ||| ||||| || ||| ||||||| |||||||||||||
Sbjct: 4197011 aggtagtcggatttggcgccaaggatccgcgcctgggtgtccgggaagaactcca 4197065
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>gb|AC009229.5| Homo sapiens BAC clone RP11-314C9 from 2, complete sequence
          Length = 209156

 Score = 46.1 bits (23), Expect = 0.085
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 275   tatgtggtgaggatggggggaag 297
             |||||||||||||||||||||||
Sbjct: 92801 tatgtggtgaggatggggggaag 92779
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>ref|NM_112443.1| Arabidopsis thaliana PLDALPHA1 (PHOSPHOLIPASE D ALPHA 1);
            phospholipase D AT3G15730 (PLDALPHA1) mRNA, complete cds
          Length = 2795

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                              
Query: 296  aggtagtccgacttggtgccgaggatgcgggcccgggtgtcggggaagaa 345
            |||||||| || |||||||||||||| ||||||   ||||| ||||||||
Sbjct: 2502 aggtagtctgatttggtgccgaggatacgggcctttgtgtccgggaagaa 2453
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>gb|BT014735.1| Arabidopsis thaliana At3g15730.1 mRNA sequence
          Length = 718

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                             
Query: 296 aggtagtccgacttggtgccgaggatgcgggcccgggtgtcggggaagaa 345
           |||||||| || |||||||||||||| ||||||   ||||| ||||||||
Sbjct: 696 aggtagtctgatttggtgccgaggatacgggcctttgtgtccgggaagaa 647
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>gb|AC006663.1| Caenorhabditis elegans fosmid H24K24, complete sequence
          Length = 32209

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 45    agtaatacaaacatcagaaacc 66
             ||||||||||||||||||||||
Sbjct: 22145 agtaatacaaacatcagaaacc 22166
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>emb|CR391935.9| Zebrafish DNA sequence from clone DKEY-256K13 in linkage group 23,
             complete sequence
          Length = 197191

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 29    caatttataattaaacagtaat 50
             ||||||||||||||||||||||
Sbjct: 66507 caatttataattaaacagtaat 66486
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>emb|BX469903.9| Zebrafish DNA sequence from clone CH211-46H12 in linkage group 23,
             complete sequence
          Length = 175747

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 29    caatttataattaaacagtaat 50
             ||||||||||||||||||||||
Sbjct: 92895 caatttataattaaacagtaat 92874
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>gb|AF428278.1|AF428278 Arabidopsis thaliana AT3g15730/MSJ11_13 mRNA, complete cds
          Length = 1886

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                              
Query: 296  aggtagtccgacttggtgccgaggatgcgggcccgggtgtcggggaagaa 345
            |||||||| || |||||||||||||| ||||||   ||||| ||||||||
Sbjct: 1597 aggtagtctgatttggtgccgaggatacgggcctttgtgtccgggaagaa 1548
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>ref|NM_070954.2| Caenorhabditis elegans H24K24.2 (H24K24.2) mRNA, complete cds
          Length = 1473

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 45  agtaatacaaacatcagaaacc 66
           ||||||||||||||||||||||
Sbjct: 469 agtaatacaaacatcagaaacc 490
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>gb|BT003026.1| Arabidopsis thaliana At3g15730/MSJ11_13 gene, complete cds
          Length = 1572

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                              
Query: 296  aggtagtccgacttggtgccgaggatgcgggcccgggtgtcggggaagaa 345
            |||||||| || |||||||||||||| ||||||   ||||| ||||||||
Sbjct: 1550 aggtagtctgatttggtgccgaggatacgggcctttgtgtccgggaagaa 1501
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>dbj|AB017071.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MSJ11
          Length = 81370

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                               
Query: 296   aggtagtccgacttggtgccgaggatgcgggcccgggtgtcggggaagaa 345
             |||||||| || |||||||||||||| ||||||   ||||| ||||||||
Sbjct: 42804 aggtagtctgatttggtgccgaggatacgggcctttgtgtccgggaagaa 42755
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>emb|X56656.1|LEPHOA L.enzymogenes phoA gene for secreted alkaline phosphatase
          Length = 2292

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 367  caccacgccgtcgttggcgac 387
            |||||||||||||||||||||
Sbjct: 1948 caccacgccgtcgttggcgac 1928
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>emb|BX548247.6| Zebrafish DNA sequence from clone DKEY-177G18 in linkage group 23,
              complete sequence
          Length = 180406

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 37     aattaaacagtaatacaaaca 57
              |||||||||||||||||||||
Sbjct: 131290 aattaaacagtaatacaaaca 131270
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>dbj|BS000229.1| Pan troglodytes chromosome 22 clone:RP43-015P20, map 22, complete
             sequences
          Length = 179285

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 341   aagaactccatgccaggcagc 361
             |||||||||||||||||||||
Sbjct: 53521 aagaactccatgccaggcagc 53541
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>dbj|AP001747.1| Homo sapiens genomic DNA, chromosome 21q, section 91/105
          Length = 340000

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 341    aagaactccatgccaggcagc 361
              |||||||||||||||||||||
Sbjct: 146957 aagaactccatgccaggcagc 146977
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>dbj|AP001626.1| Homo sapiens genomic DNA, chromosome 21, clone:KB1559F8, MX1-D21S171
             region, complete sequence
          Length = 145762

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 341   aagaactccatgccaggcagc 361
             |||||||||||||||||||||
Sbjct: 78005 aagaactccatgccaggcagc 78025
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>dbj|AB017602.1| Homo sapiens PDE9A gene for cGMP phosphodiesterase, complete cds
          Length = 125000

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 341  aagaactccatgccaggcagc 361
            |||||||||||||||||||||
Sbjct: 1390 aagaactccatgccaggcagc 1410
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>gb|BC032099.2| Homo sapiens pygopus homolog 2 (Drosophila), mRNA (cDNA clone
           MGC:20502 IMAGE:4126360), complete cds
          Length = 3190

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 278 gtggtgaggatggggggaag 297
           ||||||||||||||||||||
Sbjct: 936 gtggtgaggatggggggaag 955
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>gb|BC013725.1| Homo sapiens pygopus homolog 2 (Drosophila), mRNA (cDNA clone
           IMAGE:3859726), partial cds
          Length = 2508

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 278 gtggtgaggatggggggaag 297
           ||||||||||||||||||||
Sbjct: 246 gtggtgaggatggggggaag 265
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>ref|XM_525221.1| PREDICTED: Pan troglodytes similar to Pygopus homolog 2
           (LOC469836), mRNA
          Length = 1083

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 278 gtggtgaggatggggggaag 297
           ||||||||||||||||||||
Sbjct: 626 gtggtgaggatggggggaag 645
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>ref|XM_593770.2| PREDICTED: Bos taurus similar to Pygopus homolog 2 (LOC540401), mRNA
          Length = 1773

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 278  gtggtgaggatggggggaag 297
            ||||||||||||||||||||
Sbjct: 1106 gtggtgaggatggggggaag 1125
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>ref|NM_138300.3| Homo sapiens pygopus homolog 2 (Drosophila) (PYGO2), mRNA
          Length = 3227

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 278 gtggtgaggatggggggaag 297
           ||||||||||||||||||||
Sbjct: 970 gtggtgaggatggggggaag 989
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>gb|AC132454.3| Mus musculus BAC clone RP23-127P22 from chromosome 19, complete sequence
          Length = 225152

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 199    tttctgaaacacaagttctg 218
              ||||||||||||||||||||
Sbjct: 136964 tttctgaaacacaagttctg 136945
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>gb|AC127316.3| Mus musculus BAC clone RP23-222G16 from 13, complete sequence
          Length = 203032

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 32     tttataattaaacagtaata 51
              ||||||||||||||||||||
Sbjct: 123470 tttataattaaacagtaata 123451
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>emb|AL451085.20| Human DNA sequence from clone RP11-307C12 on chromosome 1 Contains the
             PMVK gene for phosphomevalonate kinase, the PBXIP1 gene
             for pre-B-cell leukemia transcription factor interacting
             protein 1, the gene for pygopus 2 (PYGO2), the  SHC1 gene
             for SHC (Src homology 2 domain containing) transforming
             protein 1, the CKS1B gene for CDC28 protein kinase
             regulatory subunit 1B, the gene for FAD-synthetase
             (PP591), the LENEP gene for lens epithelial protein, the
             ZFP67 gene for zinc finger protein 67 homolog (mouse), the
             gene for a novel protein (FLJ32934), a novel gene, the
             gene for a novel protein (FLJ32785) the 5' end of the
             ADAM15 gene for a disintegrin and metalloproteinase domain
             15 (metargidin), and two CpG islands, complete sequence
          Length = 182166

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 278   gtggtgaggatggggggaag 297
             ||||||||||||||||||||
Sbjct: 87674 gtggtgaggatggggggaag 87655
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>emb|CR860452.1| Pongo pygmaeus mRNA; cDNA DKFZp459G041 (from clone DKFZp459G041)
          Length = 3222

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 278  gtggtgaggatggggggaag 297
            ||||||||||||||||||||
Sbjct: 993  gtggtgaggatggggggaag 1012
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>emb|CR624320.1| full-length cDNA clone CS0DL007YH03 of B cells (Ramos cell line)
           Cot 25-normalized of Homo sapiens (human)
          Length = 2734

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 278 gtggtgaggatggggggaag 297
           ||||||||||||||||||||
Sbjct: 540 gtggtgaggatggggggaag 559
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>dbj|AK095899.1| Homo sapiens cDNA FLJ38580 fis, clone HCHON2008582, highly similar
           to FERRITIN HEAVY CHAIN
          Length = 2034

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 278 gtggtgaggatggggggaag 297
           ||||||||||||||||||||
Sbjct: 810 gtggtgaggatggggggaag 829
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>dbj|AK092389.1| Homo sapiens cDNA FLJ35070 fis, clone PLACE5000139
          Length = 3128

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 278 gtggtgaggatggggggaag 297
           ||||||||||||||||||||
Sbjct: 919 gtggtgaggatggggggaag 938
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>dbj|AK090545.1| Homo sapiens cDNA FLJ33226 fis, clone ASTRO2001029
          Length = 2497

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 278 gtggtgaggatggggggaag 297
           ||||||||||||||||||||
Sbjct: 288 gtggtgaggatggggggaag 307
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>dbj|AP007157.1| Aspergillus oryzae RIB40 genomic DNA, SC023
          Length = 2661830

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 70      taaagtatccaagtctcatattac 93
               |||| |||||||||||||||||||
Sbjct: 2285010 taaactatccaagtctcatattac 2284987
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>gb|AC008914.7| Homo sapiens chromosome 5 clone CTD-2270I16, complete sequence
          Length = 139677

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 30    aatttataattaaacagtaa 49
             ||||||||||||||||||||
Sbjct: 36426 aatttataattaaacagtaa 36445
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>gb|AF457208.1| Homo sapiens pygopus 2 (PYGO2) mRNA, complete cds
          Length = 1221

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 278 gtggtgaggatggggggaag 297
           ||||||||||||||||||||
Sbjct: 764 gtggtgaggatggggggaag 783
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>gb|AF289598.1|AF289598 Homo sapiens clone pp7910 unknown mRNA
          Length = 2977

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 278 gtggtgaggatggggggaag 297
           ||||||||||||||||||||
Sbjct: 720 gtggtgaggatggggggaag 739
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>gb|AC016632.7| Homo sapiens chromosome 5 clone RP11-175M2, complete sequence
          Length = 177185

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 30    aatttataattaaacagtaa 49
             ||||||||||||||||||||
Sbjct: 12231 aatttataattaaacagtaa 12212
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>gb|BC006132.1| Homo sapiens pygopus homolog 2 (Drosophila), mRNA (cDNA clone
           MGC:13050 IMAGE:3627860), complete cds
          Length = 3193

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 278 gtggtgaggatggggggaag 297
           ||||||||||||||||||||
Sbjct: 936 gtggtgaggatggggggaag 955
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>emb|BX908754.8| Zebrafish DNA sequence from clone DKEY-196D8 in linkage group 18,
             complete sequence
          Length = 94961

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 182   ctataacaacctgctattttctga 205
             |||||||| |||||||||||||||
Sbjct: 39144 ctataacaccctgctattttctga 39167
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>gb|AY111616.1| Zea mays CL18897_1 mRNA sequence
          Length = 676

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 37 aattaaacagtaatacaaac 56
          ||||||||||||||||||||
Sbjct: 73 aattaaacagtaatacaaac 92
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>gb|AY294150.1| Platyamoeba placida small subunit ribosomal RNA gene, partial
           sequence
          Length = 1893

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 217 tgaatcaccaaaggaaccac 236
           ||||||||||||||||||||
Sbjct: 238 tgaatcaccaaaggaaccac 219


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,236,075
Number of Sequences: 3902068
Number of extensions: 3236075
Number of successful extensions: 73808
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 73697
Number of HSP's gapped (non-prelim): 111
length of query: 393
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 371
effective length of database: 17,147,199,772
effective search space: 6361611115412
effective search space used: 6361611115412
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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